View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10603_9 (Length: 363)
Name: NF10603_9
Description: NF10603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10603_9 |
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Alignment Details
Target: chr3 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 30 - 361
Target Start/End: Original strand, 27207811 - 27208142
Alignment:
| Q |
30 |
gatataccacaagtttaaccatcatattcatctttttgtcaccaagatatattgtatacccttgttgtgggtgggccttcaatctcttctcaatgcattc |
129 |
Q |
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| T |
27207811 |
gatataccacaagtttaaccatcatattcatcttttgttcaccaagatatattgtatacccttgttgtgggttggccttcaatctcgcctcaatgcattc |
27207910 |
T |
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| Q |
130 |
ttttgttcatcctcttcatataggacagaaacaccacatattttaaatttttaattgttgttctttgtgaattgtaacatattgaagaatttaaaattgt |
229 |
Q |
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| T |
27207911 |
ttgtgttcatcctcttcatataggacagaaacaccacatattttaaatttttaattgttgttctttgtgaattgtaacatattgaagaatttaaaattgt |
27208010 |
T |
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| Q |
230 |
aggtgtcaaatattcaattacgtgacttttttccttcaaaagtaaactctaaggaatatgttaaggctcagaggtgcatcatacttgaatgacatagatc |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27208011 |
aggtgtcaaatattcaattacgtgacttttttccttcaaaagtaaactctaaggaatatgttaaggctcagaggtgcatcatacttgaatgacatagatc |
27208110 |
T |
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| Q |
330 |
ctcattgacggttgcgtgtatttgaataagaa |
361 |
Q |
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||||||||||||| |||||||||||||||||| |
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| T |
27208111 |
ctcattgacggttacgtgtatttgaataagaa |
27208142 |
T |
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