View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10603_low_1 (Length: 259)

Name: NF10603_low_1
Description: NF10603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10603_low_1
NF10603_low_1
[»] chr2 (30 HSPs)
chr2 (15-251)||(19886484-19886720)
chr2 (23-251)||(11231162-11231393)
chr2 (23-251)||(22513009-22513240)
chr2 (23-251)||(28775631-28775862)
chr2 (23-251)||(24685605-24685836)
chr2 (128-251)||(24826523-24826646)
chr2 (23-164)||(12728593-12728735)
chr2 (23-159)||(23777963-23778100)
chr2 (23-164)||(3798516-3798658)
chr2 (23-164)||(8944047-8944189)
chr2 (23-164)||(34824676-34824818)
chr2 (23-201)||(42177845-42178024)
chr2 (23-164)||(16935794-16935936)
chr2 (23-164)||(17006454-17006596)
chr2 (23-159)||(12641560-12641697)
chr2 (23-164)||(12635781-12635923)
chr2 (56-164)||(23774370-23774479)
chr2 (56-159)||(5888548-5888652)
chr2 (25-113)||(21142098-21142187)
chr2 (23-74)||(25265402-25265453)
chr2 (128-201)||(25213372-25213446)
chr2 (23-74)||(462938-462989)
chr2 (23-74)||(8891442-8891493)
chr2 (24-71)||(19794719-19794766)
chr2 (23-74)||(36982453-36982504)
chr2 (24-74)||(14906452-14906502)
chr2 (24-74)||(19689413-19689463)
chr2 (24-74)||(23820272-23820322)
chr2 (23-71)||(20627328-20627376)
chr2 (23-55)||(24341420-24341452)
[»] chr5 (36 HSPs)
chr5 (15-251)||(12567-12803)
chr5 (15-251)||(21073418-21073654)
chr5 (15-251)||(18777815-18778051)
chr5 (15-251)||(19500092-19500327)
chr5 (15-251)||(22366303-22366540)
chr5 (15-251)||(4199808-4200044)
chr5 (15-251)||(25426821-25427057)
chr5 (15-251)||(43443221-43443454)
chr5 (23-251)||(29188108-29188335)
chr5 (23-251)||(10777794-10778025)
chr5 (23-251)||(21932205-21932436)
chr5 (23-251)||(21938375-21938606)
chr5 (23-226)||(27010042-27010244)
chr5 (23-251)||(35582237-35582468)
chr5 (23-226)||(7425525-7425729)
chr5 (23-251)||(22882908-22883139)
chr5 (23-251)||(36989594-36989825)
chr5 (23-202)||(11211940-11212120)
chr5 (23-201)||(35790974-35791153)
chr5 (23-171)||(17471494-17471643)
chr5 (23-201)||(23514762-23514941)
chr5 (23-164)||(1219433-1219575)
chr5 (128-251)||(11343008-11343133)
chr5 (56-164)||(23328791-23328900)
chr5 (56-164)||(24616395-24616504)
chr5 (56-164)||(24712771-24712880)
chr5 (56-164)||(24745789-24745898)
chr5 (128-251)||(16105967-16106092)
chr5 (23-74)||(34939477-34939528)
chr5 (23-74)||(18531079-18531130)
chr5 (15-74)||(22053845-22053904)
chr5 (23-74)||(23507165-23507216)
chr5 (23-74)||(25900418-25900469)
chr5 (24-74)||(20623170-20623220)
chr5 (24-74)||(21233540-21233590)
chr5 (24-74)||(37052945-37052995)
[»] chr6 (28 HSPs)
chr6 (15-251)||(27653806-27654042)
chr6 (15-226)||(25175756-25175968)
chr6 (15-148)||(16825678-16825811)
chr6 (23-251)||(16376197-16376428)
chr6 (23-251)||(16383521-16383752)
chr6 (23-251)||(10488900-10489131)
chr6 (23-251)||(22251390-22251621)
chr6 (23-251)||(14625953-14626181)
chr6 (23-251)||(22225562-22225793)
chr6 (23-226)||(16232093-16232297)
chr6 (52-251)||(19299467-19299669)
chr6 (23-241)||(16555973-16556194)
chr6 (23-241)||(16632529-16632750)
chr6 (23-159)||(1650022-1650156)
chr6 (23-226)||(18086674-18086878)
chr6 (23-164)||(1556206-1556348)
chr6 (23-201)||(19610219-19610398)
chr6 (56-226)||(29869627-29869798)
chr6 (23-164)||(23977970-23978112)
chr6 (143-251)||(16814821-16814930)
chr6 (23-159)||(13620712-13620849)
chr6 (23-72)||(15862671-15862720)
chr6 (23-74)||(1657760-1657811)
chr6 (23-74)||(35009451-35009502)
chr6 (23-73)||(27751625-27751675)
chr6 (23-155)||(29666074-29666208)
chr6 (128-201)||(4991396-4991470)
chr6 (23-72)||(23153647-23153696)
[»] chr7 (31 HSPs)
chr7 (15-251)||(13910847-13911083)
chr7 (15-251)||(10989602-10989840)
chr7 (23-251)||(16478786-16479013)
chr7 (15-251)||(2437650-2437888)
chr7 (23-251)||(7822929-7823160)
chr7 (23-251)||(7830240-7830471)
chr7 (23-226)||(13572877-13573079)
chr7 (23-251)||(27176634-27176865)
chr7 (23-251)||(27101461-27101692)
chr7 (23-251)||(27108809-27109040)
chr7 (23-251)||(38783553-38783784)
chr7 (23-226)||(18979872-18980076)
chr7 (23-226)||(15927769-15927973)
chr7 (23-226)||(15950641-15950846)
chr7 (23-164)||(15760027-15760169)
chr7 (23-164)||(13758571-13758713)
chr7 (23-159)||(18253761-18253898)
chr7 (77-159)||(15862174-15862257)
chr7 (23-164)||(14250811-14250953)
chr7 (23-159)||(48622584-48622721)
chr7 (56-159)||(16418731-16418835)
chr7 (23-74)||(13321216-13321267)
chr7 (23-74)||(47481043-47481094)
chr7 (56-159)||(10000288-10000392)
chr7 (23-74)||(13037026-13037077)
chr7 (23-74)||(16211966-16212017)
chr7 (128-202)||(15516719-15516793)
chr7 (23-74)||(11580751-11580802)
chr7 (24-74)||(11516428-11516478)
chr7 (24-74)||(15441576-15441626)
chr7 (24-74)||(30262141-30262191)
[»] scaffold0023 (4 HSPs)
scaffold0023 (15-251)||(36286-36522)
scaffold0023 (35-248)||(169736-169951)
scaffold0023 (23-164)||(153920-154062)
scaffold0023 (23-74)||(48798-48849)
[»] scaffold0008 (2 HSPs)
scaffold0008 (15-251)||(31498-31734)
scaffold0008 (23-74)||(128181-128232)
[»] chr8 (26 HSPs)
chr8 (15-251)||(30120915-30121152)
chr8 (23-251)||(24549182-24549409)
chr8 (23-251)||(21851787-21852016)
chr8 (23-251)||(6774083-6774309)
chr8 (23-251)||(21844394-21844623)
chr8 (23-251)||(271184-271415)
chr8 (23-251)||(644505-644736)
chr8 (23-251)||(830240-830471)
chr8 (49-251)||(15318983-15319188)
chr8 (49-251)||(15499352-15499557)
chr8 (15-223)||(16674245-16674451)
chr8 (23-251)||(22088618-22088849)
chr8 (23-164)||(22006171-22006313)
chr8 (23-201)||(13720804-13720983)
chr8 (23-171)||(16195432-16195581)
chr8 (48-201)||(13662141-13662295)
chr8 (23-164)||(16872964-16873106)
chr8 (23-74)||(16404987-16405038)
chr8 (23-70)||(17345769-17345816)
chr8 (23-80)||(43373474-43373531)
chr8 (23-74)||(16193728-16193779)
chr8 (23-74)||(24928803-24928854)
chr8 (24-74)||(5238288-5238338)
chr8 (24-74)||(22907226-22907276)
chr8 (24-74)||(24661260-24661310)
chr8 (24-74)||(43685747-43685797)
[»] chr4 (27 HSPs)
chr4 (23-251)||(10644420-10644647)
chr4 (15-164)||(47357847-47357994)
chr4 (23-226)||(15287096-15287300)
chr4 (23-226)||(18169171-18169375)
chr4 (23-226)||(15294205-15294409)
chr4 (56-226)||(22351915-22352086)
chr4 (23-164)||(7131978-7132120)
chr4 (23-164)||(20000924-20001066)
chr4 (23-159)||(19020687-19020824)
chr4 (25-159)||(18248421-18248556)
chr4 (23-164)||(17145570-17145712)
chr4 (48-150)||(8378377-8378480)
chr4 (56-164)||(26339253-26339362)
chr4 (23-121)||(22738470-22738568)
chr4 (128-226)||(14952085-14952183)
chr4 (95-159)||(9795499-9795564)
chr4 (23-74)||(15675101-15675152)
chr4 (23-74)||(33240900-33240951)
chr4 (127-159)||(14996444-14996476)
chr4 (23-74)||(122089-122140)
chr4 (23-74)||(10104262-10104313)
chr4 (23-74)||(54118256-54118307)
chr4 (24-74)||(10488763-10488813)
chr4 (24-74)||(16327938-16327988)
chr4 (24-74)||(26680401-26680451)
chr4 (126-159)||(8378491-8378524)
chr4 (23-55)||(31115829-31115861)
[»] scaffold0420 (1 HSPs)
scaffold0420 (23-230)||(13171-13376)
[»] chr3 (27 HSPs)
chr3 (15-226)||(41270268-41270478)
chr3 (15-226)||(55316412-55316622)
chr3 (23-251)||(49232637-49232868)
chr3 (23-251)||(1467563-1467794)
chr3 (23-251)||(12264615-12264847)
chr3 (23-251)||(12812042-12812273)
chr3 (23-226)||(22275410-22275615)
chr3 (23-164)||(16821340-16821479)
chr3 (23-201)||(15468216-15468395)
chr3 (23-201)||(25058940-25059119)
chr3 (23-159)||(15615034-15615168)
chr3 (23-201)||(18896920-18897099)
chr3 (23-201)||(18911194-18911373)
chr3 (23-159)||(12902008-12902145)
chr3 (23-201)||(5228514-5228692)
chr3 (23-159)||(15936553-15936690)
chr3 (23-159)||(15938395-15938532)
chr3 (23-159)||(54651658-54651795)
chr3 (23-159)||(44229186-44229323)
chr3 (23-107)||(13839094-13839177)
chr3 (23-74)||(12030159-12030210)
chr3 (25-201)||(14842446-14842622)
chr3 (23-74)||(15859036-15859087)
chr3 (23-74)||(51158030-51158081)
chr3 (127-164)||(8268646-8268683)
chr3 (127-164)||(8275746-8275783)
chr3 (24-74)||(2449250-2449300)
[»] scaffold1711 (1 HSPs)
scaffold1711 (15-226)||(1153-1363)
[»] scaffold0076 (2 HSPs)
scaffold0076 (23-251)||(43198-43426)
scaffold0076 (23-251)||(39304-39535)
[»] chr1 (19 HSPs)
chr1 (15-226)||(5072237-5072447)
chr1 (23-251)||(18059582-18059813)
chr1 (23-251)||(17148768-17149000)
chr1 (23-251)||(17004839-17005070)
chr1 (23-251)||(38054915-38055146)
chr1 (23-198)||(22228009-22228185)
chr1 (23-198)||(22232706-22232882)
chr1 (52-251)||(19962323-19962525)
chr1 (23-159)||(2116455-2116589)
chr1 (23-159)||(45051623-45051757)
chr1 (15-121)||(18601071-18601177)
chr1 (21-164)||(46523588-46523731)
chr1 (56-201)||(22035681-22035827)
chr1 (56-164)||(7640847-7640956)
chr1 (128-202)||(15861284-15861358)
chr1 (23-74)||(20913230-20913281)
chr1 (23-74)||(20931545-20931596)
chr1 (23-74)||(20445879-20445930)
chr1 (23-74)||(20893638-20893689)
[»] scaffold0139 (2 HSPs)
scaffold0139 (23-251)||(20937-21167)
scaffold0139 (23-251)||(13883-14112)
[»] scaffold0213 (2 HSPs)
scaffold0213 (48-217)||(29388-29558)
scaffold0213 (191-251)||(29565-29626)
[»] scaffold0107 (2 HSPs)
scaffold0107 (23-251)||(31510-31741)
scaffold0107 (23-111)||(39847-39935)
[»] scaffold0026 (2 HSPs)
scaffold0026 (27-226)||(64372-64570)
scaffold0026 (23-159)||(107947-108084)
[»] scaffold0529 (1 HSPs)
scaffold0529 (23-201)||(3163-3341)
[»] scaffold0215 (2 HSPs)
scaffold0215 (23-159)||(9266-9400)
scaffold0215 (23-159)||(16164-16298)
[»] scaffold0369 (1 HSPs)
scaffold0369 (23-201)||(3923-4102)
[»] scaffold0022 (1 HSPs)
scaffold0022 (23-201)||(5088-5267)
[»] scaffold0116 (1 HSPs)
scaffold0116 (23-164)||(236-374)
[»] scaffold0092 (1 HSPs)
scaffold0092 (48-201)||(10624-10778)
[»] scaffold0191 (1 HSPs)
scaffold0191 (25-226)||(7306-7509)
[»] scaffold1500 (1 HSPs)
scaffold1500 (23-201)||(1390-1569)
[»] scaffold0761 (1 HSPs)
scaffold0761 (23-201)||(1451-1630)
[»] scaffold0383 (1 HSPs)
scaffold0383 (23-226)||(2593-2799)
[»] scaffold0183 (1 HSPs)
scaffold0183 (56-226)||(6831-7002)
[»] scaffold0155 (1 HSPs)
scaffold0155 (58-226)||(23600-23769)
[»] scaffold0028 (2 HSPs)
scaffold0028 (128-251)||(130880-131005)
scaffold0028 (23-74)||(89466-89517)
[»] scaffold0467 (1 HSPs)
scaffold0467 (23-159)||(10257-10394)
[»] scaffold0017 (1 HSPs)
scaffold0017 (23-159)||(54075-54212)
[»] scaffold0892 (1 HSPs)
scaffold0892 (46-121)||(3637-3712)
[»] scaffold0012 (2 HSPs)
scaffold0012 (23-159)||(34076-34213)
scaffold0012 (23-74)||(247454-247505)
[»] scaffold0516 (1 HSPs)
scaffold0516 (56-159)||(12045-12149)
[»] scaffold0003 (1 HSPs)
scaffold0003 (56-159)||(7443-7547)
[»] scaffold0013 (1 HSPs)
scaffold0013 (135-226)||(154282-154373)
[»] scaffold0066 (2 HSPs)
scaffold0066 (23-159)||(45231-45369)
scaffold0066 (23-159)||(54617-54755)
[»] scaffold0075 (2 HSPs)
scaffold0075 (23-74)||(34472-34523)
scaffold0075 (126-159)||(34374-34407)
[»] scaffold0367 (1 HSPs)
scaffold0367 (128-232)||(17136-17241)
[»] scaffold0361 (1 HSPs)
scaffold0361 (27-80)||(3394-3447)
[»] scaffold0032 (1 HSPs)
scaffold0032 (95-159)||(13268-13333)
[»] scaffold0162 (1 HSPs)
scaffold0162 (26-74)||(8192-8240)
[»] scaffold0125 (1 HSPs)
scaffold0125 (23-71)||(41848-41896)
[»] scaffold0302 (1 HSPs)
scaffold0302 (23-74)||(12313-12364)
[»] scaffold0132 (2 HSPs)
scaffold0132 (23-74)||(13706-13757)
scaffold0132 (128-160)||(42677-42709)
[»] scaffold1542 (1 HSPs)
scaffold1542 (23-74)||(546-597)
[»] scaffold0772 (1 HSPs)
scaffold0772 (23-74)||(5729-5780)
[»] scaffold0413 (1 HSPs)
scaffold0413 (23-74)||(6076-6127)
[»] scaffold0266 (1 HSPs)
scaffold0266 (23-74)||(3594-3645)
[»] scaffold0195 (2 HSPs)
scaffold0195 (23-74)||(19406-19457)
scaffold0195 (23-74)||(21490-21541)
[»] scaffold0175 (1 HSPs)
scaffold0175 (23-74)||(968-1019)
[»] scaffold0106 (1 HSPs)
scaffold0106 (23-74)||(41929-41980)
[»] scaffold0025 (2 HSPs)
scaffold0025 (23-74)||(9049-9100)
scaffold0025 (23-55)||(148921-148953)
[»] scaffold0077 (1 HSPs)
scaffold0077 (23-71)||(36928-36976)
[»] scaffold0498 (1 HSPs)
scaffold0498 (23-74)||(9078-9129)
[»] scaffold0049 (1 HSPs)
scaffold0049 (23-74)||(48387-48438)
[»] scaffold0018 (1 HSPs)
scaffold0018 (23-74)||(51194-51245)
[»] scaffold0011 (1 HSPs)
scaffold0011 (23-74)||(123176-123227)
[»] scaffold0141 (2 HSPs)
scaffold0141 (24-74)||(22741-22791)
scaffold0141 (24-74)||(26996-27046)
[»] scaffold0124 (1 HSPs)
scaffold0124 (24-74)||(1594-1644)
[»] scaffold0078 (1 HSPs)
scaffold0078 (24-74)||(37078-37128)


Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 19886720 - 19886484
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19886720 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaa 19886621  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19886620 tgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 19886521  T
Q  215 attcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    |||||||||||||||||||||||||||||||||||||    
T  19886520 attcctaaagcttcccttcaaccctcttgttcttctc 19886484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 11231393 - 11231162
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  11231393 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 11231294  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  11231293 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 11231194  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  11231193 caagctttcccttcaacactcttgttcttctc 11231162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 22513240 - 22513009
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  22513240 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 22513141  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  22513140 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 22513041  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  22513040 caagctttcccttcaacactcttgttcttctc 22513009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 28775862 - 28775631
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  28775862 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 28775763  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  28775762 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 28775663  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  28775662 caagctttcccttcaacactcttgttcttctc 28775631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 24685836 - 24685605
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  24685836 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 24685737  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  24685736 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 24685637  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| || |||||||||||    
T  24685636 caagctttcccttcaacacttttgttcttctc 24685605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 128 - 251
Target Start/End: Complemental strand, 24826646 - 24826523
Alignment:
Q  128 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaaagctt 227  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||  ||| ||| | ||||||||||||||||||||||||||||||||||||||||||    
T  24826646 atgattatgatgatgactaacccctttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccacttgattcctaaagctt 24826547  T
Q  228 cccttcaaccctcttgttcttctc 251  Q
    |||||||||||||||| |||||||    
T  24826546 cccttcaaccctcttgctcttctc 24826523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 12728593 - 12728735
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  12728593 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 12728692  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||| ||||    
T  12728693 ttgtacatgattatgataataactaacccccttaccttagaag 12728735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 23778100 - 23777963
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    ||||||||||||||||  || ||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | ||||    
T  23778100 catcaattcatgcataagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 23778001  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  ||||||||||||| |||||||||||| |||||||    
T  23778000 ttgaacatgattatgatgataactaacccctttacctt 23777963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 3798658 - 3798516
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  3798658 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 3798559  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||| |||||||||||||||||||||||||||||||||| ||||    
T  3798558 ttatacatgattatgataataactaacccccttaccttagaag 3798516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 8944047 - 8944189
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  8944047 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 8944146  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||| ||||    
T  8944147 ttgtacatgattatgataataactaacccccttaccttagaag 8944189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 34824676 - 34824818
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  34824676 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 34824775  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||| ||||||||||||||||| ||||    
T  34824776 ttgtacatgattatgataatcactaacccccttaccttagaag 34824818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 42178024 - 42177845
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||| ||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  42178024 catcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 42177925  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||| ||  || | ||||||||||| ||||    
T  42177924 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagccccta 42177845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 16935794 - 16935936
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||| ||||||| ||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  16935794 catcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 16935893  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||| ||||    
T  16935894 ttgtacatgattatgataataactaacccccttaccttagaag 16935936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 17006454 - 17006596
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||| ||||||| ||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  17006454 catcaattcatgcacaagaaaatagcatcacagcaagagcatgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 17006553  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||| ||||    
T  17006554 ttgtacatgattatgataataactaacccccttaccttagaag 17006596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 12641697 - 12641560
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  12641697 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 12641598  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  ||||||||||||||||||||||||||||||||||    
T  12641597 ttgtacatgattatgataataactaacccccttacctt 12641560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 12635923 - 12635781
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  ||||||||||||| | |||||||||||||||||| |||| | ||||    
T  12635923 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacctattttcatacaacatgaggaaatgcaaaaa 12635824  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||| ||||    
T  12635823 ttgtacatgattatgataataactaacccccttaccttagaag 12635781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 23774370 - 23774479
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaa-ttacacatgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||| || ||  |||| ||  || ||||||||||||||||||||||||||    
T  23774370 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaacttgattatgataataactaaccccctt 23774469  T
Q  155 acctttgaag 164  Q
    ||||| ||||    
T  23774470 accttagaag 23774479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 5888652 - 5888548
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| ||  ||||||  | | |||||||||| | ||| |||||||||    
T  5888652 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaaccccctt 5888553  T
Q  155 acctt 159  Q
    |||||    
T  5888552 acctt 5888548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 21142098 - 21142187
Alignment:
Q  25 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaa-catgagaaa 113  Q
    |||||||||||| |  || ||| ||||||| |||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||||||    
T  21142098 tcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgagaaa 21142187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 25265453 - 25265402
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  25265453 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagca 25265402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 25213372 - 25213446
Alignment:
Q  128 atgattatgataataactaacccccttacctttgaagttgatta-tccttaatcctagtttcaattcagctccta 201  Q
    |||||||||||||  |||||||||||||||||||||| |||||| |||| ||  || | ||||||||||||||||    
T  25213372 atgattatgataaagactaacccccttacctttgaagatgattattcctaaactcttgcttcaattcagctccta 25213446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 462938 - 462989
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||| ||| ||||||||   ||||||||||||||||    
T  462938 catcaattcatgcatacaaatatatcatcacagttggagcacgaatttagca 462989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 8891442 - 8891493
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||||  |||||||   ||||||||||||||||    
T  8891442 catcaattcatgcatacaaacatattatcacagttggagcacgaatttagca 8891493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 19794766 - 19794719
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaattta 71  Q
    ||||||||||||||||||||||| ||||||||   |||||||||||||    
T  19794766 atcaattcatgcatacaaacatatcatcacagttggagcacgaattta 19794719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 36982504 - 36982453
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||| ||||||||||| ||||||||   ||||||||||||||||    
T  36982504 catcaattcatgaatacaaacatatcatcacagttggagcacgaatttagca 36982453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 14906502 - 14906452
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  14906502 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 14906452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 19689463 - 19689413
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  19689463 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 19689413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 23820272 - 23820322
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  23820272 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 23820322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 20627376 - 20627328
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaattta 71  Q
    ||||||||| |||||||||||||| ||||||||   |||||||||||||    
T  20627376 catcaattcgtgcatacaaacatatcatcacagttggagcacgaattta 20627328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 24341452 - 24341420
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacag 55  Q
    |||||||||||||||||||||||| ||||||||    
T  24341452 catcaattcatgcatacaaacatatcatcacag 24341420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 221; Significance: 1e-122; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 12567 - 12803
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12567 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaa 12666  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  12667 tacaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctaacttcaattcagctcctaggtcacccacttg 12766  T
Q  215 attcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    |||||||||||||||||||||||||||||||||||||    
T  12767 attcctaaagcttcccttcaaccctcttgttcttctc 12803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 21073654 - 21073418
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  21073654 acaactaacatccattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcattaacccattttcatacaacatgagaaaa 21073555  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  21073554 tgcaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagcttcaattcagctcctaggtcacccacttg 21073455  T
Q  215 attcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    |||||||||||||||||||||||||||||||||||||    
T  21073454 attcctaaagcttcccttcaaccctcttgttcttctc 21073418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 18778051 - 18777815
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  18778051 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaacccattttcatacaacatgagaaaa 18777952  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  ||| ||| | |||||||||||||||||||||||||||||    
T  18777951 tgcaaaattacacatgattatgataatcactaacccccttacctttgaagttaattatctctaacccttgcttcaattcagctcctaggtcacccacttg 18777852  T
Q  215 attcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    |||||| ||||||||||||||||||||||||||||||    
T  18777851 attcctcaagcttcccttcaaccctcttgttcttctc 18777815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 19500092 - 19500327
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  19500092 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaagtgttcatcaacccattttcatacaacatgagaaaa 19500191  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||| ||||||||||||    
T  19500192 tgcaaaattacacatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctccta-gtcacccacttg 19500290  T
Q  215 attcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  19500291 attcctcaagcttcccttcaactctcttgttcttctc 19500327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 22366540 - 22366303
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  22366540 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgctcatcaacccattttcatacaacatgagaaaa 22366441  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccactt 213  Q
    | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||| | ||||||||| ||||||||||| |||||||    
T  22366440 tgcaaaattacacatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcaactcctaggtcaccccactt 22366341  T
Q  214 gattcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    |||| ||||||||||||||||||||||||| |||||||    
T  22366340 gattgctaaagcttcccttcaaccctcttgctcttctc 22366303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 4200044 - 4199808
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| |    
T  4200044 acaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcatgaattattcatcaactcattttcatacaacatgagaata 4199945  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||||||||    
T  4199944 tgcaaaattacacatgattatgataatccctaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccacttg 4199845  T
Q  215 attcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    ||||||||||||||||||||||||||||| |||||||    
T  4199844 attcctaaagcttcccttcaaccctcttgctcttctc 4199808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 25426821 - 25427057
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25426821 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaa 25426920  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatc-cttaatcctagtttcaattcagctcctaggtcacccactt 213  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || |  ||| | |||||||||||||||| || ||||||||    
T  25426921 tgcaaaattacacatgattatgataatcactaacccccttacctttgaagttgattatctctaaccccttgcttcaattcagctccta-gttacccactt 25427019  T
Q  214 gattcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    ||||| | |||||||||||||||||||||| |||||||    
T  25427020 gattctttaagcttcccttcaaccctcttgctcttctc 25427057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 43443454 - 43443221
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |    
T  43443454 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttaacatgaattgttcatcaatccattttcatataacatgagaata 43443355  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | |  |||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||||||||    
T  43443354 tgc--aattacacatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccacttg 43443257  T
Q  215 attcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    |||||| ||||||||||||||||||| || |||||||    
T  43443256 attcct-aagcttcccttcaaccctcatgctcttctc 43443221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 29188335 - 29188108
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| ||||||    
T  29188335 catcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcgacccattttcatacaacatgagaaaatgcaaaat 29188236  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattccta 221  Q
    |  |||||||||| ||||| |||||||||||||||||||||||||||||||  ||| ||| | ||||||||||||||||||||| |||||||||||||||    
T  29188235 t--acatgattataataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccccacttgattccta 29188138  T
Q  222 aagcttcccttcaaccctcttgttcttctc 251  Q
    |||||||||||||||||||||| |||||||    
T  29188137 aagcttcccttcaaccctcttgctcttctc 29188108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 10778025 - 10777794
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  10778025 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 10777926  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcct 220  Q
    ||  |||||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||    
T  10777925 ttgtacatgattatgataatcactaccccccttacctttgaagatgattatccttaacccttgcttcaattcagctcctaggtcaccccacttgattcct 10777826  T
Q  221 aaagctt-cccttcaaccctcttgttcttctc 251  Q
     |||||| ||||||||| ||||||||||||||    
T  10777825 caagcttccccttcaactctcttgttcttctc 10777794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 21932436 - 21932205
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  21932436 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 21932337  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | |||||||||    
T  21932336 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 21932237  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  21932236 caagctttcccttcaacactcttgttcttctc 21932205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 21938606 - 21938375
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  21938606 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 21938507  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | |||||||||    
T  21938506 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 21938407  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  21938406 caagctttcccttcaacactcttgttcttctc 21938375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 27010042 - 27010244
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||| |||||     
T  27010042 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaa 27010141  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaa 222  Q
    |  |||||||| ||||||||||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| ||||||||||||||||||||    
T  27010142 t-tacatgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaa 27010240  T
Q  223 agct 226  Q
    ||||    
T  27010241 agct 27010244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 35582237 - 35582468
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  35582237 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 35582336  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  35582337 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 35582436  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  35582437 caagctttcccttcaacactcttgttcttctc 35582468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 7425525 - 7425729
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||| ||||||||| |  || |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  7425525 catcgattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 7425624  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattccta 221  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| |||||||||||||||||||    
T  7425625 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 7425724  T
Q  222 aagct 226  Q
    |||||    
T  7425725 aagct 7425729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 22883139 - 22882908
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| ||||||||||||||||| |||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  22883139 catcaattcaagcacaagaaaatagcatcacagcaagagcacaaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 22883040  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  |||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||| | |||||||||||||||||||||||| | |||||| |     
T  22883039 ttgtacatgattatgataataactaacccccttatctttgaagttgattatccctaacccttgcttcaattcagctcctaggtcacccaaattgatttcc 22882940  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  22882939 caagctttcccttcaacactcttgttcttctc 22882908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 36989825 - 36989594
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| ||||||||| |||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||| | |||| |    
T  36989825 catcaattcaagcacaagaaaatagcatcacagctagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaattgcaaaga 36989726  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  36989725 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 36989626  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  36989625 caagctttcccttcaacactcttgttcttctc 36989594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 202
Target Start/End: Complemental strand, 11212120 - 11211940
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | ||||    
T  11212120 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 11212021  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctag 202  Q
    ||  ||||||||||||||||||||||||||||||||||||||| |||||| || |||  || | |||||||||||||||||    
T  11212020 ttgaacatgattatgataataactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctcctag 11211940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 35791153 - 35790974
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  35791153 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 35791054  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | ||||||||||||||||    
T  35791053 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 35790974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 171
Target Start/End: Complemental strand, 17471643 - 17471494
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaa- 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||| |||||     
T  17471643 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttcatacaacatgagaaaatacaaaat 17471544  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgatta 171  Q
    ||  ||||||||||||||||||||||||||||||||||||||| ||||||    
T  17471543 ttgtacatgattatgataataactaacccccttacctttgaagatgatta 17471494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 23514762 - 23514941
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  23514762 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 23514861  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  ||||||||||||| |||||||||||||||||||| ||||  ||||| ||  ||  || | ||||||||||||||||    
T  23514862 ttgaacatgattatgatgataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 23514941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 1219575 - 1219433
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||| ||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  1219575 catcaattaatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 1219476  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||| ||||||||||||||||| ||||    
T  1219475 ttgtacatgattatgataatcactaacccccttaccttagaag 1219433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 11343008 - 11343133
Alignment:
Q  128 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcctaaagc- 225  Q
    ||||||||||||| |||||||||||||||||||||||  ||||| || ||| |   | ||||||||||||||||||||| |||||||||||||| ||||     
T  11343008 atgattatgataaaaactaacccccttacctttgaagaagattaaccctaacctctgcttcaattcagctcctaggtcaccccacttgattcctcaagct 11343107  T
Q  226 ttcccttcaaccctcttgttcttctc 251  Q
    ||||||||||| ||||||||||||||    
T  11343108 ttcccttcaacactcttgttcttctc 11343133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 23328791 - 23328900
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||| || ||  ||||||  | | ||||||||||||||||||||||||||    
T  23328791 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 23328890  T
Q  155 acctttgaag 164  Q
    ||||| ||||    
T  23328891 accttagaag 23328900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 24616395 - 24616504
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||| || ||  ||||||  | | ||||||||||||||||||||||||||    
T  24616395 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24616494  T
Q  155 acctttgaag 164  Q
    ||||| ||||    
T  24616495 accttagaag 24616504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 24712771 - 24712880
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||| || ||  ||||||  | | ||||||||||||||||||||||||||    
T  24712771 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24712870  T
Q  155 acctttgaag 164  Q
    ||||| ||||    
T  24712871 accttagaag 24712880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 24745789 - 24745898
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||| || ||  ||||||  | | ||||||||||||||||||||||||||    
T  24745789 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 24745888  T
Q  155 acctttgaag 164  Q
    ||||| ||||    
T  24745889 accttagaag 24745898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 16105967 - 16106092
Alignment:
Q  128 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcctaaagc- 225  Q
    |||||||||||||  ||||||||||||||||| ||||  ||||| ||| ||  || | ||||||||||||||||| | | |||| ||||||||| ||||     
T  16105967 atgattatgataaagactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagctcctagcttaccccaattgattcctcaagct 16106066  T
Q  226 ttcccttcaaccctcttgttcttctc 251  Q
    ||||||||||| ||||||||||||||    
T  16106067 ttcccttcaacactcttgttcttctc 16106092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 34939477 - 34939528
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  34939477 catcaattcatgcatacaaacataacatcacagttagagcacgaatttagca 34939528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 18531130 - 18531079
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  18531130 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 18531079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 22053904 - 22053845
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||| ||||||||||| |||||||||||| ||||||||   ||||||||||||||||    
T  22053904 acaactatcatcaattcatacatacaaacatatcatcacagttggagcacgaatttagca 22053845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 23507165 - 23507216
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| |||||||    ||||||||||||||||    
T  23507165 catcaattcatgcatacaaacatatcatcacaaatggagcacgaatttagca 23507216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 25900469 - 25900418
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  25900469 catcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 25900418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 20623170 - 20623220
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  20623170 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 20623220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 21233590 - 21233540
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  21233590 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 21233540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 37052945 - 37052995
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  37052945 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 37052995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 27654042 - 27653806
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27654042 acaactaacatcaattcatgcatacaagcataacatcacagcaagagcacgaatttagcatgatttgttcatcaatccattttcatacaacatgagaaaa 27653943  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  ||| ||| | |||||||||||||||||||||||||||||    
T  27653942 tgcaaaattacacatgattatgataatcactaaccccctcacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccacttg 27653843  T
Q  215 attcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    ||||||||||||||||||||||||||||| |||||||    
T  27653842 attcctaaagcttcccttcaaccctcttgctcttctc 27653806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 25175756 - 25175968
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgag-aaa 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25175756 acaactaacatcaattcatgcatacaaacataacaacacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 25175855  T
Q  114 atccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatc-cttaatcctagtttcaattcagctcctaggtcacccact 212  Q
    || |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| || |  ||| | |||||||||||||||| ||||||||||    
T  25175856 atgcaaaattatacatgattatggtaatcactaacccccttacctttgaagttgattatctctaaccccttgcttcaattcagctccta-gtcacccact 25175954  T
Q  213 tgattcctaaagct 226  Q
    ||||||| ||||||    
T  25175955 tgattccgaaagct 25175968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 148
Target Start/End: Complemental strand, 16825811 - 16825678
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16825811 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaa 16825712  T
Q  115 tccaaaattacacatgattatgataataactaac 148  Q
    | ||||||||||||||||||||||||| ||||||    
T  16825711 tgcaaaattacacatgattatgataatcactaac 16825678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 16376428 - 16376197
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  16376428 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 16376329  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | |||||||||    
T  16376328 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 16376229  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  16376228 caagctttcccttcaacactcttgttcttctc 16376197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 16383752 - 16383521
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  16383752 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 16383653  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | |||||||||    
T  16383652 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 16383553  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  16383552 caagctttcccttcaacactcttgttcttctc 16383521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 10488900 - 10489131
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  10488900 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 10488999  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  10489000 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 10489099  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  10489100 caagctttcccttcaacactcttgttcttctc 10489131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 22251621 - 22251390
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||| |||| |    
T  22251621 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaga 22251522  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||| ||||||||||| ||||||| | ||| ||| | |||||||||||||||||||||||| | |||||||||    
T  22251521 ttgtacatgattatgataataactaacccccatacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 22251422  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| |||| |||||| ||||||||||||||    
T  22251421 caagctttccattcaacactcttgttcttctc 22251390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 14626181 - 14625953
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacat--gagaaaatccaaa 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||| ||||    |||| |||||||  |||||  |  |||    
T  14626181 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcaataattatccat-aatcacaattcaaacaacatttgagaatttgtaaa 14626083  T
Q  121 attacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcct 220  Q
     | | | |||||| |||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||||||||||||||    
T  14626082 gtga-agatgattgtgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccacttgattcct 14625984  T
Q  221 aaagcttcccttcaaccctcttgttcttctc 251  Q
     ||||||||||||||||||||||||||||||    
T  14625983 caagcttcccttcaaccctcttgttcttctc 14625953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 22225793 - 22225562
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||||||| |  || ||| |||||||| ||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||| |||| |    
T  22225793 catcaattcatgcacaagaaaatagcatcacagaaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaga 22225694  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||| ||||||||||| ||||||| | ||| ||| | |||||||||||||||||||||||| | |||||||||    
T  22225693 ttgtacatgattatgataataactaacccccatacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 22225594  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| |||| |||||| ||||||||||||||    
T  22225593 caagctttccattcaacactcttgttcttctc 22225562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 16232093 - 16232297
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  16232093 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 16232192  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattccta 221  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| |||||||||||||||||||    
T  16232193 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 16232292  T
Q  222 aagct 226  Q
    |||||    
T  16232293 aagct 16232297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 251
Target Start/End: Original strand, 19299467 - 19299669
Alignment:
Q  52 acagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-attacacatgattatgataataactaaccc 150  Q
    |||||||||||||||||||| ||  |||||| |||||| ||||||||||||||||||||||||| |||| |||  |||||||||||||||||||||||||    
T  19299467 acagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaaccc 19299566  T
Q  151 ccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcctaaagc-ttcccttcaaccctcttgttctt 248  Q
    |||||||||||||||||||||||  ||| ||| | |||||||||||||||||||| ||| | |||| |||  |||| ||||||||||| |||||||||||    
T  19299567 ccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcgcccaaattgaatccccaagctttcccttcaacactcttgttctt 19299666  T
Q  249 ctc 251  Q
    |||    
T  19299667 ctc 19299669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 241
Target Start/End: Complemental strand, 16556194 - 16555973
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||| ||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  16556194 catcaattcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 16556095  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  16556094 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 16555995  T
Q  221 aaagc-ttcccttcaaccctct 241  Q
     |||| ||||||||||| ||||    
T  16555994 caagctttcccttcaacactct 16555973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 241
Target Start/End: Complemental strand, 16632750 - 16632529
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||| ||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  16632750 catcaattcaagcacaagaaaatagcatcacagcaggagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 16632651  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  16632650 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 16632551  T
Q  221 aaagc-ttcccttcaaccctct 241  Q
     |||| ||||||||||| ||||    
T  16632550 caagctttcccttcaacactct 16632529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 1650156 - 1650022
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  1650156 catcaattcatgcatacaaacgtaacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 1650057  T
Q  123 tacacatgattatgataataactaacccccttacctt 159  Q
    |  |||||||||||||||  |||||||||||||||||    
T  1650056 t--acatgattatgataaagactaacccccttacctt 1650022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 226
Target Start/End: Complemental strand, 18086878 - 18086674
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  18086878 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 18086779  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattccta 221  Q
    ||  ||||||||||  |||||||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| ||||||||||||||| |||    
T  18086778 ttgtacatgattatactaataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgatttcta 18086679  T
Q  222 aagct 226  Q
    |||||    
T  18086678 aagct 18086674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 1556206 - 1556348
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  1556206 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 1556305  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  ||||||||||||| |||||||||||||||||||| ||||    
T  1556306 ttgaacatgattatgatgataactaacccccttaccttagaag 1556348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 19610219 - 19610398
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||| ||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||| | ||||    
T  19610219 catcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatcagaaaatgcaaaaa 19610318  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | ||||||||||||||||    
T  19610319 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 19610398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 226
Target Start/End: Complemental strand, 29869798 - 29869627
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| ||  ||||||  | | ||||||||||||||||||||||||||    
T  29869798 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaattttaaattgattatgataataactaaccccctt 29869699  T
Q  155 acctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaaagct 226  Q
    ||||| ||||  ||| | ||  ||  || | |||||||||||||||| ||||||||||||||||||||||||    
T  29869698 accttagaagaagatcaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 29869627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 23977970 - 23978112
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  23977970 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 23978069  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  ||||||||||||||||||||||| |||||||||| ||||    
T  23978070 ttgtacatgattatgataataactaacgcccttaccttagaag 23978112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 143 - 251
Target Start/End: Complemental strand, 16814930 - 16814821
Alignment:
Q  143 actaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcctaaagcttcccttcaaccctct 241  Q
    |||||||| ||||||||||||||||||||||  ||| ||| | ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  16814930 actaaccctcttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcaccccacttgattgctaaagcttcccttcaaacctct 16814831  T
Q  242 tgttcttctc 251  Q
    || |||||||    
T  16814830 tgctcttctc 16814821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 13620849 - 13620712
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||| ||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  13620849 catcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 13620750  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  ||||||||||||  |  |||||||||||||||||    
T  13620749 ttgtacatgattatgaagaagactaacccccttacctt 13620712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 15862671 - 15862720
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttag 72  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  15862671 catcaattcatgcatacaaacataacatcacagttagagcacgaatttag 15862720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 1657811 - 1657760
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||    
T  1657811 catcaattcatgcatccaaacataacatcacagttagagcacgaatttagca 1657760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 35009502 - 35009451
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  35009502 catcaattcatgcatacaaacttaacatcacagttagagcacgaatttagca 35009451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 27751625 - 27751675
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagc 73  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  27751625 catcaattcatgcatacaaacataacatcacaattagagcacgaatttagc 27751675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 155
Target Start/End: Original strand, 29666074 - 29666208
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaac-atgagaaaatccaa-a 120  Q
    ||||||||||| ||||  || ||||||||||||| |||||||||||||| ||  |||| | |||||  ||||||||||||||| |||||||| | ||| |    
T  29666074 catcaattcatacataagaaaataacatcacagctagagcacgaatttaacaacaattatccatcaccccattttcatacaacaatgagaaattgcaata 29666173  T
Q  121 attacacatgattatgataataactaaccccctta 155  Q
    |||  ||||||||||||| |  |||||||| ||||    
T  29666174 attgaacatgattatgatgaagactaacccactta 29666208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 201
Target Start/End: Original strand, 4991396 - 4991470
Alignment:
Q  128 atgattatgataataactaacccccttacctttgaagttgatta-tccttaatcctagtttcaattcagctccta 201  Q
    |||||||||||||  |||||||||||||||||||||| |||||| |||| ||  || | ||||||||||||||||    
T  4991396 atgattatgataaagactaacccccttacctttgaagatgattattcctaaactcttgcttcaattcagctccta 4991470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 72
Target Start/End: Original strand, 23153647 - 23153696
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttag 72  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||    
T  23153647 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttag 23153696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 7e-98; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 13911083 - 13910847
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |    
T  13911083 acaattaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgagaata 13910984  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||||||||    
T  13910983 tgcaaaattacacatgattatgataatcaataacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccacttg 13910884  T
Q  215 attcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    ||||||||||||||||||||||||||||| |||||||    
T  13910883 attcctaaagcttcccttcaaccctcttgctcttctc 13910847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 10989602 - 10989840
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |    
T  10989602 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgatttgttcatcaacccattttcatacaacatgagaata 10989701  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacc-cactt 213  Q
    | |||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||| ||| ||| | ||||||| |||||||| |||||| |||||    
T  10989702 tgcaaaattatacatgattatgataatcactaacccccatacctttgaagttgattatccctaacccttgcttcaattaagctcctatgtcacctcactt 10989801  T
Q  214 gattcctaaagcttcccttc-aaccctcttgttcttctc 251  Q
    ||||||| ||||| |||||| ||| |||||| |||||||    
T  10989802 gattcctcaagctccccttctaacactcttgatcttctc 10989840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 16479013 - 16478786
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  16479013 catcaattcatgcatacaaacataacatcgcagtaagagcacgaatctaacatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 16478914  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaa 222  Q
    || |  ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||| |    
T  16478913 taaa--tgattatgataatcactaacccccttacctttgaagttgattatccttaaccctagcttcacttcagctcctaggtcacccacttgattcctca 16478816  T
Q  223 agctt-cccttcaaccctcttgttcttctc 251  Q
    ||||| |||| |||| ||||||||||||||    
T  16478815 agcttcccctccaacactcttgttcttctc 16478786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 2437650 - 2437888
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||    
T  2437650 acaactaacatcaattcatgcatacaaacataacatcacaacaagagcacgaatttagcaagaattgttcattatcccattttcatacaacatgagaaaa 2437749  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccactt 213  Q
    | |||||||  ||||||||||||||||||||||||||||||||||||||| ||||||| | ||| ||| | ||||||||||||||||||||| |||| ||    
T  2437750 tgcaaaattgtacatgattatgataataactaacccccttacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcaccccaatt 2437849  T
Q  214 gattcctaaagc-ttcccttcaaccctcttgttcttctc 251  Q
    ||||||| |||| ||||||||||| ||| ||||||||||    
T  2437850 gattcctcaagctttcccttcaacactcctgttcttctc 2437888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 7822929 - 7823160
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  7822929 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 7823028  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | |||||||||    
T  7823029 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 7823128  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  7823129 caagctttcccttcaacactcttgttcttctc 7823160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 7830240 - 7830471
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  7830240 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 7830339  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | |||||||||    
T  7830340 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 7830439  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  7830440 caagctttcccttcaacactcttgttcttctc 7830471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 13572877 - 13573079
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||| |||||     
T  13572877 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaa 13572976  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaa 222  Q
    |  |||||||| ||||||||||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| ||||||||||||||||||||    
T  13572977 t-tacatgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaa 13573075  T
Q  223 agct 226  Q
    ||||    
T  13573076 agct 13573079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 27176634 - 27176865
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  27176634 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 27176733  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | |||||||||    
T  27176734 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattcct 27176833  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  27176834 caagctttcccttcaacactcttgttcttctc 27176865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 27101692 - 27101461
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  27101692 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 27101593  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  27101592 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 27101493  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  27101492 caagctttcccttcaacactcttgttcttctc 27101461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 27109040 - 27108809
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  27109040 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 27108941  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  27108940 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 27108841  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  27108840 caagctttcccttcaacactcttgttcttctc 27108809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 38783784 - 38783553
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  38783784 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 38783685  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  38783684 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 38783585  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  38783584 caagctttcccttcaacactcttgttcttctc 38783553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 23 - 226
Target Start/End: Complemental strand, 18980076 - 18979872
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  18980076 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 18979977  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattccta 221  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| |||||||||||||||||||    
T  18979976 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 18979877  T
Q  222 aagct 226  Q
    |||||    
T  18979876 aagct 18979872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 15927769 - 15927973
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||| | ||||    
T  15927769 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgatcatcaatccattttcatacaacatgagaaaatgcaaaaa 15927868  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattccta 221  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| |||||||||||||||||||    
T  15927869 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 15927968  T
Q  222 aagct 226  Q
    |||||    
T  15927969 aagct 15927973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 23 - 226
Target Start/End: Complemental strand, 15950846 - 15950641
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  15950846 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 15950747  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcct 220  Q
    ||  |||||||||||||||||||||||||||||||||||||||  ||||| ||  ||  || | ||||||||||||||||| | | |||| |||||||||    
T  15950746 ttgtacatgattatgataataactaacccccttacctttgaagaagattaacccaaactcttgcttcaattcagctcctagcttaccccaattgattcct 15950647  T
Q  221 aaagct 226  Q
     |||||    
T  15950646 caagct 15950641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 15760169 - 15760027
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  15760169 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaataattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 15760070  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  ||||||||||||| |||||||||||||||||||| ||||    
T  15760069 ttgaacatgattatgatgataactaacccccttaccttagaag 15760027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 13758571 - 13758713
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  13758571 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 13758670  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||| ||||    
T  13758671 ttgtacatgattatgataataactaacccccttaccttagaag 13758713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 18253898 - 18253761
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||||||||||||| ||| ||||   |||||||||||||| |  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  18253898 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 18253799  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  |||||||||| || ||||||||||||||||||||    
T  18253798 ttgaacatgattataatgataactaacccccttacctt 18253761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 77 - 159
Target Start/End: Original strand, 15862174 - 15862257
Alignment:
Q  77 aattgttcatcaatccattttcatacaacatgagaaaat-ccaaaattacacatgattatgataataactaacccccttacctt 159  Q
    ||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  15862174 aattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattatacatgattatgataataactaacccccttacctt 15862257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 14250953 - 14250811
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||| ||| |||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  14250953 catcaattcatgcacaagaaaatagcattacaacaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 14250854  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
     |  ||||||||| ||| |||||||||||||||||||| ||||    
T  14250853 atgaacatgattacgatgataactaacccccttaccttagaag 14250811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 48622721 - 48622584
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaa- 121  Q
    |||||||||||||| |  || ||| |||||||| ||||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||| |||||     
T  48622721 catcaattcatgcacaagaaaatatcatcacagtaagagcacgaatttagcatcaattgttcatcaacccattttcgtaaaacatgagaaaatgcaaaaa 48622622  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  |  |||||||||| | ||| ||||||||||||||    
T  48622621 tttgaattgattatgatgaaaacaaacccccttacctt 48622584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 16418731 - 16418835
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| ||  ||||||  | | |||||||||| | ||| |||||||||    
T  16418731 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaaccccctt 16418830  T
Q  155 acctt 159  Q
    |||||    
T  16418831 acctt 16418835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 13321216 - 13321267
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  13321216 catcaattcatgcatacaaacataacatcacagttagagcacgaatttagca 13321267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 47481094 - 47481043
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  47481094 catcaattcatgcatacaaacataacatcacagttagagcacgaatttagca 47481043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 10000392 - 10000288
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||| ||||||||||||| ||||||| |||||||||||||| || |||||||  | | |||||||||| |  || |||||||||    
T  10000392 caagagcacgaatttgacataaattgttcatcaacccatttttatacaacatgagaagatgcaaaatttgaaattgattatgatgaagacaaaccccctt 10000293  T
Q  155 acctt 159  Q
    |||||    
T  10000292 acctt 10000288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 13037077 - 13037026
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  13037077 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 13037026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 16211966 - 16212017
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  16211966 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 16212017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 15516793 - 15516719
Alignment:
Q  128 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctag 202  Q
    |||||||||||||  |||||||||||||| ||||||| |||||| || |||  || | |||||||||||||||||    
T  15516793 atgattatgataaagactaacccccttacatttgaagatgattaaccctaactcttgcttcaattcagctcctag 15516719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 11580802 - 11580751
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||||  |||||||   ||||||||||||||||    
T  11580802 catcaattcatgcatacaaacatattatcacagttggagcacgaatttagca 11580751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 11516428 - 11516478
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  11516428 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 11516478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 15441626 - 15441576
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  15441626 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 15441576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 30262191 - 30262141
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  30262191 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 30262141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 177; Significance: 2e-95; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 36286 - 36522
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |    
T  36286 acaactaacatcaattcatacatacaaacataacatcactacaagagcacgaatttagcatgaattgttcatcaacccagtttcatacaacatgagaata 36385  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| ||| | |||||||||||||||||||||||||||||    
T  36386 tgcaaaattacacatgattatgataatcattaacccccttacctttgaagttgattatccctaacccttgcttcaattcagctcctaggtcacccacttg 36485  T
Q  215 attcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  36486 attcctaaagctttccttcaaccctcttgctcttctc 36522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 35 - 248
Target Start/End: Complemental strand, 169951 - 169736
Alignment:
Q  35 catacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacacatgatta 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||    
T  169951 catacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaattatacatgatta 169852  T
Q  135 tgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcctaaagcttc-cctt 232  Q
    ||||||| |||||||||||||| ||||||| ||||||||  ||| ||| | ||||||||||||| || |||| |||||||||||||| ||||||| ||||    
T  169851 tgataatcactaacccccttacttttgaagatgattatcactaacccttgcttcaattcagctcttatgtcaccccacttgattcctcaagcttcgcctt 169752  T
Q  233 caaccctcttgttctt 248  Q
    |||| |||||||||||    
T  169751 caactctcttgttctt 169736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 154062 - 153920
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  154062 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 153963  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||| ||||    
T  153962 ttgtacatgattatgataataactaacccccttaccttagaag 153920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 48798 - 48849
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  48798 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 48849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 177; Significance: 2e-95; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 31734 - 31498
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |    
T  31734 acaactaacatcaattcatgcattcaaacataacatcaccacaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgagaata 31635  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||  ||| ||| | |||||||||||||||||||||||||||||    
T  31634 tgcaaaattacacatgattatgataatcactaacccccttacatttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccacttg 31535  T
Q  215 attcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    ||||||||||||||||||||||||||||| |||||||    
T  31534 attcctaaagcttcccttcaaccctcttgctcttctc 31498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 128232 - 128181
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||    |||||||||||||||    
T  128232 catcaattcatgcatacaaacatatcatcacagttgaagcacgaatttagca 128181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 170; Significance: 3e-91; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 15 - 251
Target Start/End: Original strand, 30120915 - 30121152
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  |    
T  30120915 acaactaacataaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaactcattttcatacaacatgagatta 30121014  T
Q  115 t-ccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccactt 213  Q
    | | |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||  ||| |||   ||||||||||||||||||||||||||||    
T  30121015 tacaaaaattacacatgattatgataatcactaacccccttacctttgaagatgattatctctaacccttacttcaattcagctcctaggtcacccactt 30121114  T
Q  214 gattcctaaagcttcccttcaaccctcttgttcttctc 251  Q
    |||||||||||||||||||||||||||||| |||||||    
T  30121115 gattcctaaagcttcccttcaaccctcttgctcttctc 30121152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 24549182 - 24549409
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  24549182 catcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 24549281  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaa 222  Q
    |  |||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||| |    
T  24549282 t--acatgattatgataatcactaacccccttaccttagaagttgattatccttaaccctagcttcacttcagctcctaggtcacccacttgattcctca 24549379  T
Q  223 agctt-cccttcaaccctcttgttcttctc 251  Q
    ||||| |||| |||| ||||||||||||||    
T  24549380 agcttcccctccaacactcttgttcttctc 24549409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 21852016 - 21851787
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||| |||| |||||     
T  21852016 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccaatttcatacaacatgagcaaatgcaaaaa 21851917  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaa 222  Q
    |  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||| |||||||||||||||||||||| |    
T  21851916 tt-acatgattgtgataataactaacccccttacctttgaagttgattatccttaatcctagctccacttcagcttctaggtcacccacttgattcctca 21851818  T
Q  223 agctt--cccttcaaccctcttgttcttctc 251  Q
    |||||  |||| |||| ||||||||||||||    
T  21851817 agcttccccctccaacactcttgttcttctc 21851787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 6774309 - 6774083
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| ||||||    
T  6774309 catcaattcatgcatacaaacataacatcacagtaagagcacgaatctagcatgaattgttcatcaacccattttcatataacatgagaaaatgcaaaat 6774210  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaa 222  Q
    |  |||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||| |||||||||||||||||| |    
T  6774209 t--acatgattatgataatcactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctccta-gtcacccacttgattcctca 6774113  T
Q  223 agctt-cccttcaaccctcttgttcttctc 251  Q
    ||||| |||| |||| ||||||||||||||    
T  6774112 agcttcccctccaacactcttgttcttctc 6774083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 21844623 - 21844394
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||| |||| |||||     
T  21844623 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccaatttcatacaacatgagcaaatgcaaaaa 21844524  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaa 222  Q
    |  |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | || ||||||| |||||||||||||||||||||| |    
T  21844523 tt-acatgattgtgataataactaacccccttaccgttgaagttgattatccttaatcctagctccacttcagcttctaggtcacccacttgattcctca 21844425  T
Q  223 agctt--cccttcaaccctcttgttcttctc 251  Q
    |||||  |||| |||| ||||||||||||||    
T  21844424 agcttccccctccaacactcttgttcttctc 21844394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 271415 - 271184
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  271415 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 271316  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  271315 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 271216  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  271215 caagctttcccttcaacactcttgttcttctc 271184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 644505 - 644736
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  644505 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 644604  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  644605 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 644704  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  644705 caagctttcccttcaacactcttgttcttctc 644736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 830240 - 830471
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  830240 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 830339  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  830340 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 830439  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  830440 caagctttcccttcaacactcttgttcttctc 830471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 49 - 251
Target Start/End: Complemental strand, 15319188 - 15318983
Alignment:
Q  49 atcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-attacacatgattatgataataactaa 147  Q
    ||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |||  ||||||||||||||||||||||    
T  15319188 atcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaa 15319089  T
Q  148 cccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcctaaagc-ttcccttcaaccctcttgtt 245  Q
    ||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||  |||| || |||||||| ||||||||    
T  15319088 cccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccccaagcttttccttcaacactcttgtt 15318989  T
Q  246 cttctc 251  Q
    ||||||    
T  15318988 cttctc 15318983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 49 - 251
Target Start/End: Complemental strand, 15499557 - 15499352
Alignment:
Q  49 atcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-attacacatgattatgataataactaa 147  Q
    ||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |||  ||||||||||||||||||||||    
T  15499557 atcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaa 15499458  T
Q  148 cccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcctaaagc-ttcccttcaaccctcttgtt 245  Q
    ||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||  |||| || |||||||| ||||||||    
T  15499457 cccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccccaagcttttccttcaacactcttgtt 15499358  T
Q  246 cttctc 251  Q
    ||||||    
T  15499357 cttctc 15499352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 16674451 - 16674245
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||    
T  16674451 acaactaacataaattcatgcataaaaacataacatcacagaaagagcacgaatttagcatgaattgttcaacaacccattttcatacaacatgagcaaa 16674352  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||| |  |||||||| ||||||||||||||||||||||||| ||||  |||||  || ||  || | ||||||||||||| || ||||||||||||    
T  16674351 tgcaaaaat-tacatgattgtgataataactaacccccttaccttagaagaagatta-actcaactcttgcttcaattcagctcataagtcacccacttg 16674254  T
Q  215 attcctaaa 223  Q
    |||||||||    
T  16674253 attcctaaa 16674245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 22088849 - 22088618
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| |||  |||||||||||||||||||||||| |||| |    
T  22088849 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacacattttcatacaacatgagaaaatgcaaaga 22088750  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  22088749 ttgtacatgattatgatgataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 22088650  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  22088649 caagctttcccttcaacactcttgttcttctc 22088618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 22006313 - 22006171
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  22006313 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 22006214  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||||||||    
T  22006213 ttgtacatgattatgataataactaacccccttacctttgaag 22006171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 13720983 - 13720804
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  13720983 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 13720884  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | ||||||||||||||||    
T  13720883 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 13720804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 23 - 171
Target Start/End: Original strand, 16195432 - 16195581
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  |||||| |||||||||| ||| ||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  16195432 catcaattcatgcacaagaacatagcatcacagcacgagaacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 16195531  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgatta 171  Q
    ||  |||||||||||||||||| ||||||||||||||| |||| ||||||    
T  16195532 ttgtacatgattatgataataattaacccccttaccttagaagatgatta 16195581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 13662295 - 13662141
Alignment:
Q  48 catcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaattacacatgattatgataataacta 146  Q
    |||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||||||||||||||| | ||||||  |||||||||||||||||||||    
T  13662295 catcacagcaagagcacgaatttagcaacaattgtttatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataacta 13662196  T
Q  147 acccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||||||||||||| ||||  ||||| ||  ||  || | ||||||||||||||||    
T  13662195 acccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 13662141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 16873106 - 16872964
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  16873106 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 16873007  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||| ||||    
T  16873006 ttgtacatgattatgataataactaacccccttaccttagaag 16872964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 16405038 - 16404987
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  16405038 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 16404987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 17345769 - 17345816
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaattt 70  Q
    |||||||||||||||| ||||||||||||||||  |||||||||||||    
T  17345769 catcaattcatgcatataaacataacatcacagttagagcacgaattt 17345816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 43373531 - 43373474
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaatt 80  Q
    ||||||||||||||||||||| || ||||||||   ||||||||||||||||| ||||    
T  43373531 catcaattcatgcatacaaacgtatcatcacagttggagcacgaatttagcattaatt 43373474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 16193779 - 16193728
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  16193779 catcaattcatgcatacaaacatatcatcatagttggagcacgaatttagca 16193728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 24928854 - 24928803
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||||  |||||||   ||||||||||||||||    
T  24928854 catcaattcatgcatacaaacatataatcacagttggagcacgaatttagca 24928803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 5238288 - 5238338
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  5238288 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 5238338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 22907276 - 22907226
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  22907276 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 22907226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 24661310 - 24661260
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  24661310 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 24661260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 43685747 - 43685797
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  43685747 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 43685797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 9e-85; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 10644420 - 10644647
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  10644420 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat 10644519  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaa 222  Q
    |  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||| ||||||||||||||||| |    
T  10644520 t--acatgattgtgataataactaacccccttacctttgaagttgattatccttaatcctaacttcacttcagctcctagatcacccacttgattcctca 10644617  T
Q  223 agctt-cccttcaaccctcttgttcttctc 251  Q
    ||||| |||| |||| ||||||||||||||    
T  10644618 agcttcccctccaacactcttgttcttctc 10644647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 47357847 - 47357994
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  47357847 acaactaacatcaatccatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgaggaaa 47357946  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaag 164  Q
    | |||||||  |||||||| ||||||||||||||||||||||||| ||||    
T  47357947 tgcaaaatt--acatgattgtgataataactaacccccttaccttagaag 47357994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 23 - 226
Target Start/End: Complemental strand, 15287300 - 15287096
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||| ||||||||| |  || ||| ||||||||||||||||||||||||||   ||||||||||||  ||||||||||||||||||||||||| | ||||    
T  15287300 catcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaacatgagaaaatgcaaaaa 15287201  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattccta 221  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| |||||||||||||||||||    
T  15287200 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccta 15287101  T
Q  222 aagct 226  Q
    |||||    
T  15287100 aagct 15287096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 18169171 - 18169375
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  18169171 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 18169270  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcct 220  Q
    ||  |||||||||||||||||||||||||||||||| ||||||  ||||| || |||| || | ||||||||||||||||| | | |||| |||||||||    
T  18169271 ttgtacatgattatgataataactaacccccttacc-ttgaagaagattaaccctaattcttgcttcaattcagctcctagcttaccccaattgattcct 18169369  T
Q  221 aaagct 226  Q
     |||||    
T  18169370 caagct 18169375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 226
Target Start/End: Complemental strand, 15294409 - 15294205
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||| ||||||||| |  || ||| ||||||||||||||||||||||||||   ||||||||||||  ||||||||||||||||||||||||| | ||||    
T  15294409 catcgattcatgcacaagaaaatagcatcacagcaagagcacgaatttagctataattgttcatcatcccattttcatacaacatgagaaaatgcaaaaa 15294310  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattccta 221  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| ||||||||||| |||||||    
T  15294309 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttcattccta 15294210  T
Q  222 aagct 226  Q
    |||||    
T  15294209 aagct 15294205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 226
Target Start/End: Complemental strand, 22352086 - 22351915
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||| ||  ||||||  | | ||||||||||||||||||||||||||    
T  22352086 caagagcatgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 22351987  T
Q  155 acctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaaagct 226  Q
    ||||| ||||  ||||| ||  ||  || | |||||||||||||||| ||||||||||||||||||||||||    
T  22351986 accttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 22351915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 7132120 - 7131978
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||||||| | ||||    
T  7132120 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatataacatgagaaaatgcaaaaa 7132021  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||| ||||    
T  7132020 ttgtacatgattatgataataactaacccccttaccttagaag 7131978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 20000924 - 20001066
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  20000924 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 20001023  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||| ||||    
T  20001024 ttgtacatgattatgataataactaacccccttaccttagaag 20001066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 19020687 - 19020824
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||| | ||||    
T  19020687 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgacaaaatgcaaaaa 19020786  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  |||||||||||||  |||||||||||||||||||    
T  19020787 ttgaacatgattatgatggtaactaacccccttacctt 19020824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 25 - 159
Target Start/End: Original strand, 18248421 - 18248556
Alignment:
Q  25 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaatt 123  Q
    |||||||||||| |  || ||| |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||   ||||||    
T  18248421 tcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacatcaattgttcatcaacccattttcatacaacatgagaaaatgtaaaaatt 18248520  T
Q  124 acacatgattatgataataactaacccccttacctt 159  Q
      ||| ||||||||||||||||||||||||||||||    
T  18248521 gtacaagattatgataataactaacccccttacctt 18248556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 164
Target Start/End: Complemental strand, 17145712 - 17145570
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||| | |  || ||| |||||||| ||||||||||||||| ||| |||||||||||||  |||||||||||||||||||||||| | ||||    
T  17145712 catcaattcatgtacaagaaaatagcatcacagtaagagcacgaatttaacatcaattgttcatcaactcattttcatacaacatgagaaaatgcaaaaa 17145613  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||  |||||||||||||||||||||||||||||||||| ||||    
T  17145612 ttgaacatgattatgataataactaacccccttaccttagaag 17145570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 8378377 - 8378480
Alignment:
Q  48 catcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaattacacatgattatgataataacta 146  Q
    |||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||   ||||||  |||||||||||||||||||||    
T  8378377 catcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgtaaaaattgtacatgattatgataataacta 8378476  T
Q  147 accc 150  Q
    ||||    
T  8378477 accc 8378480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 164
Target Start/End: Original strand, 26339253 - 26339362
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||| || ||  ||||||  | | ||||||||||||||||||||||||||    
T  26339253 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 26339352  T
Q  155 acctttgaag 164  Q
    ||||| ||||    
T  26339353 accttagaag 26339362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 22738470 - 22738568
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||||||||| |||||||||| ||| |||||||| |||  ||||||||||||||||||||||||| |||||    
T  22738470 catcaattcatgcacaagaaaatagcatcacagcaagaacacgaatttaacatcaattgttcctcagcccattttcatacaacatgagaaaatgcaaaa 22738568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 226
Target Start/End: Original strand, 14952085 - 14952183
Alignment:
Q  128 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaaagct 226  Q
    |||||||||||||  ||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| ||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 14952183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 9795499 - 9795564
Alignment:
Q  95 tttcatacaacatgagaaaatccaaaa-ttacacatgattatgataataactaacccccttacctt 159  Q
    |||||||||||||||||||||  |||| ||  ||||||||||||| ||||||||||||||||||||    
T  9795499 tttcatacaacatgagaaaatgaaaaaattgaacatgattatgatgataactaacccccttacctt 9795564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 15675152 - 15675101
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  15675152 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 15675101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 33240900 - 33240951
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  33240900 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 33240951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 14996444 - 14996476
Alignment:
Q  127 catgattatgataataactaacccccttacctt 159  Q
    |||||||||||||||||||||||||||||||||    
T  14996444 catgattatgataataactaacccccttacctt 14996476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 122089 - 122140
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   |||||| |||||||||    
T  122089 catcaattcatgcatacaaacatatcatcacagttggagcacaaatttagca 122140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 10104313 - 10104262
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||| ||||||||    
T  10104313 catcaattcatgcatacaaacatatcatcacagttggagcacggatttagca 10104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 54118307 - 54118256
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| |||||||    ||||||||||||||||    
T  54118307 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagca 54118256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 10488763 - 10488813
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  10488763 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 10488813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 16327988 - 16327938
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  16327988 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 16327938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 26680401 - 26680451
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  26680401 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 26680451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 8378491 - 8378524
Alignment:
Q  126 acatgattatgataataactaacccccttacctt 159  Q
    |||||||||||||||||||||| |||||||||||    
T  8378491 acatgattatgataataactaatccccttacctt 8378524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 31115829 - 31115861
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacag 55  Q
    |||||||||||||||||||||||| ||||||||    
T  31115829 catcaattcatgcatacaaacatatcatcacag 31115861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 13376 - 13171
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||  |||||    
T  13376 catcaattcatgcatacaaacataacatcacactaagagcacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgaaaaat 13277  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaa 222  Q
    ||||  ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| ||||| |||||||||||||||||||||||| |    
T  13276 taca--tgattatgataatcactaacccccttacctttgaagttgattatccttaaccctagcttcacttcagttcctaggtcacccacttgattcctca 13179  T
Q  223 agcttccc 230  Q
    ||||||||    
T  13178 agcttccc 13171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 41270268 - 41270478
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | |    
T  41270268 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagtaga 41270367  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||| |  |||||||| ||||||||||||||||||||||||||||||  ||||| || ||||||| | |||||||||||||||| ||||||||||||    
T  41270368 tgcaaaaat-tacatgattgtgataataactaacccccttacctttgaagaagattaaccctaatccttgcttcaattcagctcctaagtcacccacttg 41270466  T
Q  215 attcctaaagct 226  Q
    ||||||||||||    
T  41270467 attcctaaagct 41270478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 15 - 226
Target Start/End: Original strand, 55316412 - 55316622
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  55316412 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagcaaa 55316511  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||| |  |||||||| ||||||||||||||||| ||||||||||||  ||||| || ||||||| | |||||||||||||||| ||||||||||||    
T  55316512 tgcaaaaat-tacatgattgtgataataactaacccctttacctttgaagaagattaaccctaatccttgcttcaattcagctcctaagtcacccacttg 55316610  T
Q  215 attcctaaagct 226  Q
    ||||||||||||    
T  55316611 attcctaaagct 55316622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 49232637 - 49232868
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| |||| |    
T  49232637 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaga 49232736  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | ||||||||||||| |||||||||| | ||||||||     
T  49232737 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcataggtcacccaaattgattccc 49232836  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  49232837 caagctttcccttcaacactcttgttcttctc 49232868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 1467794 - 1467563
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  1467794 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 1467695  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  1467694 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 1467595  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  1467594 caagctttcccttcaacactcttgttcttctc 1467563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 12264847 - 12264615
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  12264847 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 12264748  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc--acttgattcc 219  Q
    ||  ||||||||||||||||||||||||||||||||||||||| ||||||  |  || | | | ||||||||||||||||||||||||  | ||||||||    
T  12264747 ttgtacatgattatgataataactaacccccttacctttgaagatgattaatcccaacctttgcttcaattcagctcctaggtcaccccaaattgattcc 12264648  T
Q  220 taaagc-ttcccttcaaccctcttgttcttctc 251  Q
    | |||| ||||||||||| ||||||||||||||    
T  12264647 tcaagctttcccttcaacactcttgttcttctc 12264615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 12812042 - 12812273
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| ||| |||||||||||||||||||| ||  |||||| |||||| |||||||||||||| |||||||||| |||| |    
T  12812042 catcaattcaagcacaagaaaatagcattacagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaatatgagaaaatgcaaaga 12812141  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||| ||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  12812142 ttgtacatgattatgataataactaacccccttacctttaaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 12812241  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  12812242 caagctttcccttcaacactcttgttcttctc 12812273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 22275410 - 22275615
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaa- 121  Q
    |||||||||||||| |  || ||  |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||     
T  22275410 catcaattcatgcacaagaaaatggcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 22275509  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||| |||||| ||||||   | | ||||||||||||||||| | | |||| |||||||||    
T  22275510 ttgtacatgattatgataataactaacccccttacctttgaagatgattaaccttaacttttgcttcaattcagctcctagcttaccccaattgattcct 22275609  T
Q  221 aaagct 226  Q
     |||||    
T  22275610 caagct 22275615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 16821340 - 16821479
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||  ||| ||||||||||||| |||||||||||||||||||| |||| ||||||    
T  16821340 catcaatttatgcatacaaacataacatcacagcaagagcacggatttgacataaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat 16821439  T
Q  123 tacacatgattatgataataactaacccccttacctttgaag 164  Q
    |  |||||||| ||||||||||||||||||||||||||||||    
T  16821440 t--acatgattgtgataataactaacccccttacctttgaag 16821479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 15468395 - 15468216
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaa- 121  Q
    |||||||||||||| |  || ||| ||||| |||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||| |||||     
T  15468395 catcaattcatgcacaagaaaatagcatcatagcaagagcacgaatttagcaacaattgttcctcaacccattttcatacaacatgagaaaatgcaaaat 15468296  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  |||||||||||||||||||||||||||||||||||||||  ||||| || |||| || | ||||||||||||||||    
T  15468295 ttgtacatgattatgataataactaacccccttacctttgaagaagattaaccctaattcttgcttcaattcagctccta 15468216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 25058940 - 25059119
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  25058940 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 25059039  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||   ||||||||||||||||||||||||||||||||||||||  ||||| || ||||  | | ||||||||||||||||    
T  25059040 ttgtgcatgattatgataataactaacccccttacctttgaagaagattaaccctaatttttgcttcaattcagctccta 25059119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 15615034 - 15615168
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    |||||||||||||||||||| |||||| ||||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  15615034 catcaattcatgcatacaaatataacaccacagtaagagcacaaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 15615133  T
Q  123 tacacatgattatgataataactaacccccttacctt 159  Q
    |  |||||||||||||||  |||||||||||||||||    
T  15615134 t--acatgattatgataaagactaacccccttacctt 15615168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 18897099 - 18896920
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaa- 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||| |||||     
T  18897099 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttatcaacaattgttcatcaacccattttcatacaacatgagaaaatacaaaac 18897000  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | ||||||||||||||||    
T  18896999 ttgtacatgattatgataataactaacccccttaccttggaagaagattaacccaaactcttgcttcaattcagctccta 18896920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 18911194 - 18911373
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  18911194 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 18911293  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | ||||||||||||||||    
T  18911294 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctccta 18911373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 12902145 - 12902008
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || |||||||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||| | ||||    
T  12902145 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaaaaattattcatcaacccattttcatacaacatgagaaaatgcaaaaa 12902046  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  ||||||||||||| ||||||||||||||||||||    
T  12902045 ttgaacatgattatgatgataactaacccccttacctt 12902008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 5228514 - 5228692
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |   | |||||||||||||||||||||||||||||||  || |||||||||| |||||||||||  |||||||||||| | ||||    
T  5228514 catcaattcatgcacaaggaaataacatcacagcaagagcacgaatttagcaacaa-tgttcatcaacccattttcataacacatgagaaaatgcaaaaa 5228612  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  ||||||||||||| |||||||||||||||||||| ||||  ||||| ||  ||  || ||||||||||||||||||    
T  5228613 ttgaacatgattatgatgataactaacccccttaccttagaagaagattaacccaaactcttgtttcaattcagctccta 5228692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 15936690 - 15936553
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||||||||||||| ||| ||||   |||||||||||||| |  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  15936690 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 15936591  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  |||||||||| || ||||||||||||| ||||||    
T  15936590 ttgaacatgattataatgataactaacccccatacctt 15936553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 15938532 - 15938395
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    ||||||||||||  |||||||||| ||| ||||   ||||||| |||||| |  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  15938532 catcaattcatgattacaaacatatcattacagttggagcacgtatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 15938433  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  |||||||||| || ||||||||||||||||||||    
T  15938432 ttgaacatgattataatgataactaacccccttacctt 15938395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 54651658 - 54651795
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||| | | ||||    
T  54651658 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaaattgcaaaaa 54651757  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  ||||||||||||| |  || ||||||||||||||    
T  54651758 ttgaacatgattatgatgaagacaaacccccttacctt 54651795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 44229186 - 44229323
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaa-catgagaaaatccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||| |||||||||| ||||| ||| ||||||||||||| |||||||||||||| |||||||||    ||||    
T  44229186 catcaattcatgcacaagaaaatagcatcacaacaagagcacggatttaacatcaattgttcatcaacccattttcatacaaccatgagaaatgaaaaaa 44229285  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  |  |||||||||| | ||| ||||||||||||||    
T  44229286 tttgaattgattatgatgaaaacaaacccccttacctt 44229323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 13839094 - 13839177
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacat 107  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||  |||| ||||| |||| |  ||||||||||||    
T  13839094 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattattcat-aatcaaaattcatacaacat 13839177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 12030210 - 12030159
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  12030210 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 12030159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 201
Target Start/End: Complemental strand, 14842622 - 14842446
Alignment:
Q  25 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaaca--tgagaaaatccaaaat 122  Q
    |||||||||||||||||||||| ||||||||   ||||||||||||||||  |||| | ||| ||||    |||||||||||  ||||||  | |||| |    
T  14842622 tcaattcatgcatacaaacatatcatcacagttggagcacgaatttagcaacaattatccat-aatcacaattcatacaacatttgagaatttgcaaagt 14842524  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
     | | |||||||||||||  ||||||||||||||||| ||||  ||||| || |||  || | ||||||||||||||||    
T  14842523 ga-agatgattatgataaagactaacccccttaccttagaagaagattaaccctaactcttgcttcaattcagctccta 14842446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 15859087 - 15859036
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  15859087 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 15859036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 51158081 - 51158030
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  51158081 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 51158030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 8268683 - 8268646
Alignment:
Q  127 catgattatgataataactaacccccttacctttgaag 164  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  8268683 catgattatgataataactaacccccttaccttagaag 8268646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 8275783 - 8275746
Alignment:
Q  127 catgattatgataataactaacccccttacctttgaag 164  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  8275783 catgattatgataataactaacccccttaccttagaag 8275746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 2449300 - 2449250
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  2449300 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 2449250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 1363 - 1153
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  1363 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacatgagtaaa 1264  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||| |  |||||||| |||||||||||||||||| |||||||||||  ||||| || ||||||| | |||||||||||||||| |||||| |||||    
T  1263 tgcaaaaat-tacatgattgtgataataactaacccccctacctttgaagaagattaaccctaatccttgcttcaattcagctcctaagtcaccaacttg 1165  T
Q  215 attcctaaagct 226  Q
    ||||||||||||    
T  1164 attcctaaagct 1153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 43198 - 43426
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa-tccaaaa 121  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||||| ||||||| |||||||||||||||||||||||| | |||||    
T  43198 catcaattcatgcatagaaacataacatcccagcaagagcacgaatttgacatgaattgctcatcaacccattttcatacaacatgagaaaaatgcaaaa 43297  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattccta 221  Q
    |||||  || || ||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||     
T  43298 ttaca--tgtttgtgatagtaactaacccccttacctttgaagttgattatccttaatcctagcttcacttcagctcctagatcacccacttgattcctc 43395  T
Q  222 aagctt-cccttcaaccctcttgttcttctc 251  Q
    |||||| |||| |||| ||||||||||||||    
T  43396 aagcttcccctccaacactcttgttcttctc 43426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 39304 - 39535
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  39304 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 39403  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  39404 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 39503  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  39504 caagctttcccttcaacactcttgttcttctc 39535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 2e-73; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 15 - 226
Target Start/End: Complemental strand, 5072447 - 5072237
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||    
T  5072447 acaactaacatcaattcatgcatataaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaacccattttcatacaacttgagtaaa 5072348  T
Q  115 tccaaaattacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttg 214  Q
    | ||||| |  |||||||| ||||||||||||||||||||||||||||||  ||||| || ||||| | | |||||||||||||||| ||||||||||||    
T  5072347 tgcaaaaat-tacatgattgtgataataactaacccccttacctttgaagaagattaaccctaatctttgcttcaattcagctcctaagtcacccacttg 5072249  T
Q  215 attcctaaagct 226  Q
    ||||||||||||    
T  5072248 attcctaaagct 5072237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 18059813 - 18059582
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||| |||| |    
T  18059813 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaga 18059714  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcct 220  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||| | ||| ||| | ||||||||||||||||||||| |||| |||||||||    
T  18059713 ttatacatgattatgataataactaacccccttacctttgaagatgattattcctaacccttgcttcaattcagctcctaggtcaccccaattgattcct 18059614  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  18059613 caagctttcccttcaacactcttgttcttctc 18059582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 17148768 - 17149000
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||||||| ||| ||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  17148768 catcaattcatgcacaagaaaataacattacaacaagagcacgaatttagccacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 17148867  T
Q  122 ttacacatgattatgataataactaa-cccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcc 219  Q
    ||  |||||||||||||||||||||| |||||||||||||||||||||||||||  || ||| | |||||||||||||||| |||| |||||||||||||    
T  17148868 ttgtacatgattatgataataactaaccccccttacctttgaagttgattatccccaacccttgcttcaattcagctcctatgtcaccccacttgattcc 17148967  T
Q  220 taaagc-ttcccttcaaccctcttgttcttctc 251  Q
    | |||| ||||||||||||||||||||||||||    
T  17148968 tcaagctttcccttcaaccctcttgttcttctc 17149000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 17004839 - 17005070
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  17004839 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 17004938  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  17004939 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 17005038  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  17005039 caagctttcccttcaacactcttgttcttctc 17005070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 38055146 - 38054915
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || |||||||||||| || |||||||||||| ||  ||||||||| ||| |||||||||||||||||||||| || |||| |    
T  38055146 catcaattcaagcacaagaaaataacatcacagtaaaagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaagatgcaaaga 38055047  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  38055046 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 38054947  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  38054946 caagctttcccttcaacactcttgttcttctc 38054915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 22228009 - 22228185
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | ||||    
T  22228009 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 22228108  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctc 198  Q
    ||  ||||||||||||||||||||||||||||||||||||||| |||||| || |||  || | |||||||||||||    
T  22228109 ttgtacatgattatgataataactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctc 22228185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 22232706 - 22232882
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | ||||    
T  22232706 catcaattcatgcacaagaaaataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 22232805  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctc 198  Q
    ||  ||||||||||||||||||||||||||||||||||||||| |||||| || |||  || | |||||||||||||    
T  22232806 ttgtacatgattatgataataactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctc 22232882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 52 - 251
Target Start/End: Complemental strand, 19962525 - 19962323
Alignment:
Q  52 acagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-attacacatgattatgataataactaaccc 150  Q
    |||||||||||||||||||| ||  |||||| |||||| ||||||||||||||||||||||||| |||| |||  |||||||||||||||||||||||||    
T  19962525 acagcaagagcacgaatttaacaacaattgtccatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataactaaccc 19962426  T
Q  151 ccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcctaaagc-ttcccttcaaccctcttgttctt 248  Q
    |||||||||||||||||||||||  ||| ||| | |||||||||||||||||||| ||| | |||| |||  |||| ||||||||||| |||||||||||    
T  19962425 ccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcgcccaaattgaatccccaagctttcccttcaacactcttgttctt 19962326  T
Q  249 ctc 251  Q
    |||    
T  19962325 ctc 19962323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 2116455 - 2116589
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||| ||||||    
T  2116455 catcaattcatgcatacaaacataacatcacagtaaaagcacgaatctagcatgaattgttcatcaacccatttttatacaacatgagaaaatgcaaaat 2116554  T
Q  123 tacacatgattatgataataactaacccccttacctt 159  Q
    |  |||||||||||||||| ||||||||| |||||||    
T  2116555 t--acatgattatgataatcactaacccctttacctt 2116589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 45051623 - 45051757
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||| ||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  45051623 catcaattcatgcatacaaacgtaacatcacagtaagaacacgaatctagcatgaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 45051722  T
Q  123 tacacatgattatgataataactaacccccttacctt 159  Q
      ||||||||||||||||  |||||||||||||||||    
T  45051723 --cacatgattatgataaagactaacccccttacctt 45051757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 18601177 - 18601071
Alignment:
Q  15 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  18601177 acaactaacatcaattcatgcatacaaacataacatcacagcaagagcatgaatttagcatgaattgttcatcaacccattttcatacaacatgagcaaa 18601078  T
Q  115 tccaaaa 121  Q
    | |||||    
T  18601077 tgcaaaa 18601071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 46523588 - 46523731
Alignment:
Q  21 aacatcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa 120  Q
    |||||||||||||||| |  || ||| ||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| ||||    
T  46523588 aacatcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaa 46523687  T
Q  121 attacacatgattatgataataactaacccccttacctttgaag 164  Q
    ||   |||||||||||||||||||||||||||||||||| ||||    
T  46523688 atggaacatgattatgataataactaacccccttaccttagaag 46523731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 56 - 201
Target Start/End: Original strand, 22035681 - 22035827
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| ||  ||||||  | | ||||||||||||||||||||||||||    
T  22035681 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 22035780  T
Q  155 acctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||||| ||||  ||||| ||  ||  || | ||||||||||||||||    
T  22035781 accttagaagaagattaacccaaactcttgcttcaattcagctccta 22035827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 7640956 - 7640847
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||||||||| || ||  ||||||  | | ||||||||||||||||||||||||||    
T  7640956 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgaaaagatgtaaaatttgaaattgattatgataataactaaccccctt 7640857  T
Q  155 acctttgaag 164  Q
    ||||| ||||    
T  7640856 accttagaag 7640847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 202
Target Start/End: Complemental strand, 15861358 - 15861284
Alignment:
Q  128 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctag 202  Q
    |||||||||||||  |||||||||||||||||||||| |||||| || |||  || | |||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctcctag 15861284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 20913230 - 20913281
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  20913230 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 20913281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 20931545 - 20931596
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  20931545 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 20931596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 20445879 - 20445930
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| |||||||    ||||||||||||||||    
T  20445879 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagca 20445930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 20893689 - 20893638
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||| ||||||||||    
T  20893689 catcaattcatgcatacaaacatatcatcacagttggagcaagaatttagca 20893638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 131; Significance: 5e-68; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 21167 - 20937
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  21167 catcaattaatggatacaaacataacatcacaacaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 21068  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattccta 221  Q
    |  ||||||||||||||||||||||||||||||||||||||| ||||||  | ||| ||| | ||||||||||||||||| | | |||| |||||||||     
T  21067 tgtacatgattatgataataactaacccccttacctttgaagatgattaatcctaacccttgcttcaattcagctcctagcttaccccaattgattcctc 20968  T
Q  222 aagc-ttcccttcaaccctcttgttcttctc 251  Q
    |||| ||||||||||  ||||||||||||||    
T  20967 aagctttcccttcaaaactcttgttcttctc 20937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 23 - 251
Target Start/End: Complemental strand, 14112 - 13883
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||    
T  14112 catcaattcatgcatacagacataacatcacagcaagagcacga-tttagcaagaattgtgcatcaacccattttcatacaacatgagaaaatgcaaaat 14014  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattccta 221  Q
    |  ||||||||||||||||||||||||||||||||||||||| ||||||  | ||| ||| | ||||||||||||||||| | | |||| |||||||||     
T  14013 tgtacatgattatgataataactaacccccttacctttgaagatgattaatcctaacccttgcttcaattcagctcctagcttaccccaattgattcctc 13914  T
Q  222 aagc-ttcccttcaaccctcttgttcttctc 251  Q
    |||| ||||||||||  ||||||||||||||    
T  13913 aagctttcccttcaaaactcttgttcttctc 13883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 48 - 217
Target Start/End: Original strand, 29388 - 29558
Alignment:
Q  48 catcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-attacacatgattatgataataacta 146  Q
    |||||||||||||||||||||||| ||  ||||||||||||| ||||||||||||||||||||||||| |||| |||  |||||||||||||||||||||    
T  29388 catcacagcaagagcacgaatttaacaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaagattgtacatgattatgataataacta 29487  T
Q  147 acccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgatt 217  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  29488 acccccttacctttgaagttgattatccttaatcctagcttcacttcagctcctaggtcacccacttgatt 29558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 29565 - 29626
Alignment:
Q  191 ttcagctcctaggtcacccacttgattcctaaagctt-cccttcaaccctcttgttcttctc 251  Q
    |||||||||||||||||||||||||||||| |||||| |||| |||| ||||||||||||||    
T  29565 ttcagctcctaggtcacccacttgattcctcaagcttcccctccaacactcttgttcttctc 29626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 23 - 251
Target Start/End: Original strand, 31510 - 31741
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaa-a 121  Q
    |||||||||| ||| |  || ||| |||||||||||||||||||||||| ||  ||||||||| ||| ||||||||||||||||||||||||| |||| |    
T  31510 catcaattcaagcacaagaaaatagcatcacagcaagagcacgaatttaacaacaattgttcaccaacccattttcatacaacatgagaaaatgcaaaga 31609  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcaccc-acttgattcct 220  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||| | |||||||||||||||||||||||| | ||||||||     
T  31610 ttgtacatgattatgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcctaggtcacccaaattgattccc 31709  T
Q  221 aaagc-ttcccttcaaccctcttgttcttctc 251  Q
     |||| ||||||||||| ||||||||||||||    
T  31710 caagctttcccttcaacactcttgttcttctc 31741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 39847 - 39935
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgaga 111  Q
    |||||||||||||| |  || |||  ||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  39847 catcaattcatgcacaggaaaatagaatcacagcaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgaga 39935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 64570 - 64372
Alignment:
Q  27 aattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattaca 126  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||| ||||| |  |    
T  64570 aattcatgcatataaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaaat-ta 64472  T
Q  127 catgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaaagct 226  Q
    ||||||| ||||||||||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| |||||||||||||||||| |||||    
T  64471 catgattgtgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattccttaagct 64372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 107947 - 108084
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||||||||||||| ||| ||||   |||||||||||||| |  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  107947 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagtaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 108046  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  |||||||||| || ||||||||||||||||||||    
T  108047 ttgaacatgattataatgataactaacccccttacctt 108084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 3163 - 3341
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  3163 catcaattcatggatacaaacataacatcacagcaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaat 3262  T
Q  123 tacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    |  |||| ||||||||||||| ||||||||||||||| ||||  ||||| ||  ||  || | ||||||||||||||||    
T  3263 tgtacataattatgataataattaacccccttaccttagaagaagattaaccgaaactcttgcttcaattcagctccta 3341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 9400 - 9266
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  9400 catcaattcatgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat 9301  T
Q  123 tacacatgattatgataataactaacccccttacctt 159  Q
    |  |||||||| |||||||||||||||||||||||||    
T  9300 t--acatgattgtgataataactaacccccttacctt 9266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 16298 - 16164
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| |||||||||||||||||||| |||| ||||||    
T  16298 catcaattcatgcatacaaacataacatcacagcaaaagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagcaaatgcaaaat 16199  T
Q  123 tacacatgattatgataataactaacccccttacctt 159  Q
    |  |||||||| |||||||||||||||||||||||||    
T  16198 t--acatgattgtgataataactaacccccttacctt 16164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 23 - 201
Target Start/End: Original strand, 3923 - 4102
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | ||||    
T  3923 catcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagcaagaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 4022  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  |||||||||||||||||||||| ||||||||||| |||| |||||| || |||  || | ||||||||||||||||    
T  4023 ttgtacatgattatgataataactaaaccccttaccttagaagatgattaaccctaactcttgcttcaattcagctccta 4102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 5267 - 5088
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||||| | ||||    
T  5267 catcaattcatgcacaagaaaatagcatcacagcaagagcacgaatttaacaagaattgttcatcaacccattttcatacaacgtgagaaaatgcaaaaa 5168  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  ||||||||||||||||||||||| ||||||||||||||| |||||| || |||  || | ||||||||||||||||    
T  5167 ttgtacatgattatgataataactaactcccttacctttgaagatgattaaccctaactcttgcttcaattcagctccta 5088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 236 - 374
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaat 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||  ||| ||||||    
T  236 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttgacatgaattgttcatcaacccattttcatataacatgag-caatgcaaaat 334  T
Q  123 tacacatgattatgataataactaacccccttacctttgaag 164  Q
    |  |||||||| ||||||||||||||||||||||||| ||||    
T  335 t--acatgattttgataataactaacccccttaccttagaag 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 10778 - 10624
Alignment:
Q  48 catcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaattacacatgattatgataataacta 146  Q
    ||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||||  |||||||||||||||||||||    
T  10778 catcacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaattgtacatgattatgataataacta 10679  T
Q  147 acccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    |||||||||||||||||| |||||| || |||  || | ||||||||||||||||    
T  10678 acccccttacctttgaagatgattaaccctaactcttgcttcaattcagctccta 10624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 25 - 226
Target Start/End: Complemental strand, 7509 - 7306
Alignment:
Q  25 tcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaatt 123  Q
    |||||||||||| |  || ||| ||||||| ||||||||||||||||| |  ||||||||||||| ||||||||||||||||||||||||| | |||||     
T  7509 tcaattcatgcacaagaaaatagcatcacaacaagagcacgaatttagtaataattgttcatcaacccattttcatacaacatgagaaaatgcaaaaatg 7410  T
Q  124 acacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcctaa 222  Q
      |||||||||||||||||||||||||||||||||||||||  ||||| || |||| || | ||||||||||||||||| | | |||| ||||||||| |    
T  7409 gaacatgattatgataataactaacccccttacctttgaagaagattaaccctaattcttgcttcaattcagctcctagcttaccccaattgattcctca 7310  T
Q  223 agct 226  Q
    ||||    
T  7309 agct 7306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 1569 - 1390
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| ||| ||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  1569 catcaattcatgcacaagaaaatagcattacaacaagagcacgaatttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 1470  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||| ||  || | ||||||||||||||||    
T  1469 ttgtacatgattatgataataactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagctccta 1390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 23 - 201
Target Start/End: Complemental strand, 1630 - 1451
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||| |||||| |||||||  ||||||||||||| ||||||||||||||||||||||||| | ||||    
T  1630 catcaattcatgcacaagaaaatagcatcacagcaagtgcacgattttagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 1531  T
Q  122 ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctccta 201  Q
    ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  || ||| | ||||||||||||||||    
T  1530 ttgaacatgattatgataataactaacccccttaccttagaagaagattaacccaaacccttgcttcaattcagctccta 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 226
Target Start/End: Original strand, 2593 - 2799
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaa- 121  Q
    |||||||||||||| |  || ||| |||||| ||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||| |||||     
T  2593 catcaattcatgcacaagaaaatagcatcacggcaagagcacgaattgagcaacaattgttcatcaacccattttcatacaacatgagaaaatgcaaaaa 2692  T
Q  122 -ttacacatgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcc 219  Q
     ||  |||||||||||||||||||||||||||||||||| ||||  ||||| ||  ||  || | ||||||||||||||||| | | |||| ||||||||    
T  2693 tttgtacatgattatgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctagcttaccccaattgattcc 2792  T
Q  220 taaagct 226  Q
    | |||||    
T  2793 tcaagct 2799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 56 - 226
Target Start/End: Original strand, 6831 - 7002
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| ||  ||||||  | | ||||||||||||||||||||||||||    
T  6831 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgataataactaaccccctt 6930  T
Q  155 acctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaaagct 226  Q
    ||||| ||||  ||||| ||  ||  || | |||||||||||||||| |||||||||||||||| |||||||    
T  6931 accttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcgtaaagct 7002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 58 - 226
Target Start/End: Complemental strand, 23769 - 23600
Alignment:
Q  58 agagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaacccccttac 156  Q
    |||||||||||||  ||||| ||||||||||| |||||||||||||||||||||| ||  ||||||  | | ||| |||||||||||||||||||||||     
T  23769 agagcacgaatttgacatgagttgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgaatatgataataactaacccccttaa 23670  T
Q  157 ctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaaagct 226  Q
    ||| ||||  ||||| ||  ||  || | |||||||||| ||||| ||||||||||||||||||||||||    
T  23669 cttagaagaagattaacccaaactcttgcttcaattcagttcctaagtcacccacttgattcctaaagct 23600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 128 - 251
Target Start/End: Original strand, 130880 - 131005
Alignment:
Q  128 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcctaaagc- 225  Q
    |||||||||||||  |||||||||||||||||||||| ||||||| | ||| ||| | ||||||||||||||||||||| |||| ||||||||| ||||     
T  130880 atgattatgataaagactaacccccttacctttgaagatgattatgcctaacccttgcttcaattcagctcctaggtcaccccaattgattcctcaagct 130979  T
Q  226 ttcccttcaaccctcttgttcttctc 251  Q
    ||||||||||| ||||||||||||||    
T  130980 ttcccttcaacactcttgttcttctc 131005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 89517 - 89466
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||| ||| ||||||||   ||||||||||||||||    
T  89517 catcaattcatgcatacaaatatatcatcacagttggagcacgaatttagca 89466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 10394 - 10257
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaat-ccaaaa 121  Q
    |||||||||||||| |  || ||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||| | ||||    
T  10394 catcaattcatgcacaagaaaatatcatcacagcaagagcacgaatttagcaacaattattcatcaacccattttcatacaacatgagaaaatgcaaaaa 10295  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  ||||||||||||  |  || ||||||||||||||    
T  10294 ttgaacatgattatgaagaagacaaacccccttacctt 10257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 54075 - 54212
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaa- 121  Q
    |||||||||||||| |  || | | |||||||| ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||||     
T  54075 catcaattcatgcacaagaaaacagcatcacagtaagagcacgaatttagcatcaattgttcatcaacccattttcataaaacatgagaaaatgcaaaaa 54174  T
Q  122 ttacacatgattatgataataactaacccccttacctt 159  Q
    ||  |  |||||||||| | ||| ||||||||||||||    
T  54175 tttgaattgattatgatgaaaacaaacccccttacctt 54212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 46 - 121
Target Start/End: Original strand, 3637 - 3712
Alignment:
Q  46 aacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaa 121  Q
    |||||||||| |||||||| |||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||||    
T  3637 aacatcacagtaagagcactaatttagcatcaattgttcatcaacccattttcataaaacatgagaaaatgcaaaa 3712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 34213 - 34076
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaac-atgagaaaat-ccaaa 120  Q
    |||||||||||||| |  || ||| | |||||||||||||||||||||||||  |||| |||||||| ||| ||||||||||| |||||||||| | |||    
T  34213 catcaattcatgcacaagaaaatagcttcacagcaagagcacgaatttagcaacaatttttcatcaaccca-tttcatacaacaatgagaaaatgcaaaa 34115  T
Q  121 attacacatgattatgataataactaacccccttacctt 159  Q
    |||  ||||||||||||| |  |||||||||||||||||    
T  34114 attgaacatgattatgatgaagactaacccccttacctt 34076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 247505 - 247454
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||| ||||   ||||||||||||||||    
T  247505 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagca 247454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 56 - 159
Target Start/End: Complemental strand, 12149 - 12045
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaa-catgagaaaatccaaaattacaca-tgattatgataataactaaccccct 153  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||| ||||  ||||||  | | |||||||||||||||||||||||||    
T  12149 caagagcacgaatttaacatcaattgttcatcaacccattttcatacaaccatgag-aaatgaaaaatttgaaattgattatgataataactaaccccct 12051  T
Q  154 tacctt 159  Q
    ||||||    
T  12050 tacctt 12045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 159
Target Start/End: Original strand, 7443 - 7547
Alignment:
Q  56 caagagcacgaatttagcatgaattgttcatcaatccattttcatacaacatgagaaaatccaaaattacaca-tgattatgataataactaaccccctt 154  Q
    |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| ||  ||||||  | | |||||||||| | ||| |||||||||    
T  7443 caagagcacgaatttgacatgaattgttcatcaacccattttcatacaacatgagaagatgtaaaatttgaaattgattatgatgaaaacaaaccccctt 7542  T
Q  155 acctt 159  Q
    |||||    
T  7543 acctt 7547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 135 - 226
Target Start/End: Complemental strand, 154373 - 154282
Alignment:
Q  135 tgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtcacccacttgattcctaaagct 226  Q
    ||||||||||||||||||||||||| ||||  ||||| ||  ||  || | |||||||||||||||| ||||||||||||||||||||||||    
T  154373 tgataataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagtcacccacttgattcctaaagct 154282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 45231 - 45369
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaac-atgagaaaatccaa-a 120  Q
    |||||||||||||| |  || ||| ||||||| |||| ||||||||||| ||  |||| |||||||| ||||||||||||||| |||||||| | ||| |    
T  45231 catcaattcatgcacatcaaaatagcatcacaacaagggcacgaatttaacaacaattattcatcaacccattttcatacaacaatgagaaattgcaata 45330  T
Q  121 attacacatgattatgataataactaacccccttacctt 159  Q
    |||  ||||||||||||| |  |||||||||||||||||    
T  45331 attgaacatgattatgatgaagactaacccccttacctt 45369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 54617 - 54755
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaattgttcatcaatccattttcatacaac-atgagaaaatccaa-a 120  Q
    |||||||||||||| |  || ||| ||||||||||||  |||||||||| ||  |||| |||||||| ||||||||||||||| |||||||| | ||| |    
T  54617 catcaattcatgcacaagaaaatagcatcacagcaaggacacgaatttaacaacaattattcatcaacccattttcatacaacaatgagaaattgcaata 54716  T
Q  121 attacacatgattatgataataactaacccccttacctt 159  Q
    |||  ||||||||||||| |  ||||||| |||||||||    
T  54717 attgaacatgattatgatgaagactaaccaccttacctt 54755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 34523 - 34472
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  34523 catcaattcatgcatacaaacataacatcacagttagagcacgaatttagca 34472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 34407 - 34374
Alignment:
Q  126 acatgattatgataataactaacccccttacctt 159  Q
    ||||||||||||||||||||||||| ||||||||    
T  34407 acatgattatgataataactaaccctcttacctt 34374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 17241 - 17136
Alignment:
Q  128 atgattatgataataactaacccccttacctttgaagttgattatccttaatcctagtttcaattcagctcctaggtca-cccacttgattcctaaagct 226  Q
    ||||||||||| |  ||||||||||||||||| |||| | ||||| | ||| ||| | ||||||||||||||||||||| |||| ||||||||| |||||    
T  17241 atgattatgatgaagactaacccccttaccttagaagattattattcctaacccttgcttcaattcagctcctaggtcaccccaattgattcctcaagct 17142  T
Q  227 tccctt 232  Q
    | ||||    
T  17141 ttcctt 17136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 80
Target Start/End: Original strand, 3394 - 3447
Alignment:
Q  27 aattcatgcatacaaacataacatcacagcaagagcacgaatttagcatgaatt 80  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| ||||    
T  3394 aattcatgcatacaaacttaacatcacagctagagcacgaatttagcatcaatt 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 13333 - 13268
Alignment:
Q  95 tttcatacaacatgagaaaatccaaaa-ttacacatgattatgataataactaacccccttacctt 159  Q
    ||||||||||||||||||||| ||||| ||  ||||||||||||| ||||||||||||||||||||    
T  13333 tttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttacctt 13268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 8240 - 8192
Alignment:
Q  26 caattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||    
T  8240 caattcatgcatacaaacataacatcacagttagagcacgaatttagca 8192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 41848 - 41896
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaattta 71  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  41848 catcaattcatgcatacaaacataacatcacagttagagcacgaattta 41896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 12313 - 12364
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||||    
T  12313 catcaattcatgcatacaaacatatcatcacagttagagcacgaatttagca 12364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 13706 - 13757
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  13706 catcaattcatgcatacaaacataacatcaaagttagagcacgaatttagca 13757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Original strand, 42677 - 42709
Alignment:
Q  128 atgattatgataataactaacccccttaccttt 160  Q
    ||||||||||||| |||||||||||||||||||    
T  42677 atgattatgataaaaactaacccccttaccttt 42709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 597 - 546
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  597 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 5729 - 5780
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||||||||| ||   ||||||||||||||||    
T  5729 catcaattcatgcatacaaacataacatcaaagttggagcacgaatttagca 5780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 6127 - 6076
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  6127 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 6076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 3645 - 3594
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  3645 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 3594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 19406 - 19457
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  19406 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 19457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 21490 - 21541
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  21490 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 21541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 1019 - 968
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  1019 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 41929 - 41980
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  41929 catcaattcatgcatacaaacatatcatcacagttggagcacgaatttagca 41980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 9049 - 9100
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||||||||   ||||||||||||||||    
T  9049 catcaattcatgcatacaaacatatcatcacagatggagcacgaatttagca 9100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 55
Target Start/End: Original strand, 148921 - 148953
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacag 55  Q
    |||||||||||||||||||||||| ||||||||    
T  148921 catcaattcatgcatacaaacatatcatcacag 148953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 36976 - 36928
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaattta 71  Q
    |||||||||||||||||||||||| ||||||||   |||||||||||||    
T  36976 catcaattcatgcatacaaacatatcatcacagttggagcacgaattta 36928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 9078 - 9129
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||| |||||||||||||||||||||||||||    ||||||||||||||||    
T  9078 catcgattcatgcatacaaacataacatcacaaatggagcacgaatttagca 9129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 48387 - 48438
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| ||| ||||   ||||||||||||||||    
T  48387 catcaattcatgcatacaaacatatcattacagttggagcacgaatttagca 48438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 51245 - 51194
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||| ||| ||||||||   ||||||||||||||||    
T  51245 catcaattcatgcatacaaatatatcatcacagttggagcacgaatttagca 51194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 123227 - 123176
Alignment:
Q  23 catcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    |||||||||||||||||||||||| |||||||    ||||||||||||||||    
T  123227 catcaattcatgcatacaaacatatcatcacaattggagcacgaatttagca 123176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 22741 - 22791
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  22741 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 22791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 26996 - 27046
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  26996 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 27046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 1644 - 1594
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  1644 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 1594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 37128 - 37078
Alignment:
Q  24 atcaattcatgcatacaaacataacatcacagcaagagcacgaatttagca 74  Q
    ||||||||||||||||||||||| ||||| ||   ||||||||||||||||    
T  37128 atcaattcatgcatacaaacatatcatcaaagttggagcacgaatttagca 37078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University