View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10605_high_7 (Length: 207)
Name: NF10605_high_7
Description: NF10605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10605_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 76; Significance: 2e-35; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 42064779 - 42064854
Alignment:
| Q |
117 |
gaactacacactaggaggataatttgagactaacctccattaatttagtaattagctgtactttttccctattctt |
192 |
Q |
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| T |
42064779 |
gaactacacactaggaggataatttgagactaacctccattaatttagtaattagctgtactttttccctattctt |
42064854 |
T |
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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 42064690 - 42064722
Alignment:
| Q |
28 |
aaatcatttcacaattaactaaagaaatgacaa |
60 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
42064690 |
aaatcatttcacaattaactaaagaaatgacaa |
42064722 |
T |
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