View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10605_low_12 (Length: 239)
Name: NF10605_low_12
Description: NF10605
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10605_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 223
Target Start/End: Complemental strand, 52066604 - 52066400
Alignment:
| Q |
19 |
aagtatactatccaatatctgctggcacattacagagtattactattaagttatcacaacatgaacacaaactgttttatccaaacattgtgctcaaaac |
118 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52066604 |
aagtatactatccaatatctgctggcacattacagagtattactattaagttatcacaacatgaacacaaactgttttatccaaacattgtgctcaaaac |
52066505 |
T |
|
| Q |
119 |
ctgcactcagtaccatataaattaaaaggccgtgtattctttcttctcattatattgaacataaattctcagccattctgtgagactttcattgcaaact |
218 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52066504 |
ctgcactcagtgccatataaattaaaaggccgtgtattctttcttctcattatattgaacataaattctcagccattctgtgagactttcattgcaaact |
52066405 |
T |
|
| Q |
219 |
tttct |
223 |
Q |
| |
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||||| |
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| T |
52066404 |
tttct |
52066400 |
T |
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