View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10608_low_10 (Length: 276)
Name: NF10608_low_10
Description: NF10608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10608_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 46454161 - 46453901
Alignment:
| Q |
1 |
catggaatagaatattgaagagtatatgatagcctgtgcgaacacgtaagggaactcaatcacaacctgcacaatggaggataacgcattagtgaactta |
100 |
Q |
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| T |
46454161 |
catggaatagaatattgaagagtatatgatagcctgtgcgaacacgtaagggaactcaatcacaacctgcacaatggaggataacgcattagtgaactta |
46454062 |
T |
|
| Q |
101 |
tggaaaactgtaggttccaggcactttgtaagtaaaaatacctgagctcttgctctatatgaaacaaactgaaaaaatacctgagcaaatgcaaaacata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46454061 |
tggaaaactgtaggttccaggcactttgtaagtaaaaatacctgagctcttgctctatatgaaacaaactgaaaaaatacctgagcaaatgcaaaacata |
46453962 |
T |
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| Q |
201 |
aagccgagtacatccctgcagctctttctctatatgaaacaaatctttccactgaaacaac |
261 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46453961 |
aagctgagtacatccctgcagctctttctctatatgaaacaaatctttccactgaaacaac |
46453901 |
T |
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