View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10608_low_3 (Length: 381)
Name: NF10608_low_3
Description: NF10608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10608_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 35 - 299
Target Start/End: Original strand, 32776926 - 32777189
Alignment:
| Q |
35 |
aggaggagcagagaaaaacagcatttaagttggtaggataaagtgcatttgttgcaagctttttgatgagaagattggaaatggaatggagtgtggtggg |
134 |
Q |
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| T |
32776926 |
aggacgagcagagaaaaacagcatttaagttggtaggataaagtgcatttgttgcaagctttttgatgagaagattggaaatagaatggagtgtggtggg |
32777025 |
T |
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| Q |
135 |
gaataagggagggacattctggcatccataaatttgacagatggcacatggattgcagaaccaatgatcaatagaagccacacacgnnnnnnnncctatc |
234 |
Q |
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| T |
32777026 |
gaataagggagggacattctggcacccataaatttgacagatggcacatggattgcagaaccaatgatcaatagaagccacacacgaaaaaaaacctatc |
32777125 |
T |
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| Q |
235 |
cagaaaaatgttttaatccatttgtatattcaaattgcaagaagatattttgataatttagacag |
299 |
Q |
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| T |
32777126 |
cag-aaaatgttttaatccatttgtatattcaaattgcaagaagatattttgataatttagacag |
32777189 |
T |
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