View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10608_low_9 (Length: 294)
Name: NF10608_low_9
Description: NF10608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10608_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 19 - 284
Target Start/End: Complemental strand, 13669674 - 13669409
Alignment:
| Q |
19 |
attgttaacagcagcaagcaatggaatagctgtcaatcttctcactgacttgaacttgaaaacatcaatcattgatttccattgcatcatgttactttcc |
118 |
Q |
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| T |
13669674 |
attgttaacagcagcaagcaatggaatagctgttaatcttctcactgacttgaacttgaaaacatcaatcattgatttccattgcatcatgttactttcc |
13669575 |
T |
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| Q |
119 |
ttccaacctaattttccctccaccggtggtgaattctccgatgagtacgaggagaaactgctgcttccactattgtctgactctgttcctgaaacagggg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13669574 |
ttccaacctaattttccctccaccggtggtgaattctccgatgagtacgaggagaaactgctgcttccactattgtctgactctgttcctgaaacagggg |
13669475 |
T |
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| Q |
219 |
catctagtattgctcttggtgatgcttcatcgtcgcttgaaaactgttttttgttattgccctttg |
284 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13669474 |
catctagtattgctcttggtgatgcttcatcgtcgcttgaaaactgttttttgttattgccctttg |
13669409 |
T |
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