View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10609_high_1 (Length: 305)
Name: NF10609_high_1
Description: NF10609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10609_high_1 |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 16 - 296
Target Start/End: Complemental strand, 46132624 - 46132344
Alignment:
| Q |
16 |
atacaaataatttaatttatggtacaaattccataatttatgtgcataatgtgggtaatcaattagggctgccagtttgagttctaattctagtgctaaa |
115 |
Q |
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| T |
46132624 |
atacaaataatttaatttatggtacaaattccctaatttatgtgcataatgtgggtaatcaattagggctaccagtttgagttctaattctagtgctaaa |
46132525 |
T |
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| Q |
116 |
gtcaaccttttatatatgcaaggttgcatatctgcaaccaactgaatcattctatagacccagcttgacataaacttgataatactagactgcccttaat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46132524 |
gtcaaccttttatatatgcaaggttgcatatctgcaaccaactgaaccattctatagacccagcttgacataaacttgataatactagactgcccttaat |
46132425 |
T |
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| Q |
216 |
ggctaatcagctagggataatacaaattacaaattatacaatgcaagctaaaaaagacagctgggtcatttttcttcatct |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46132424 |
ggctaatcagctagggataatacaaattacaaattatacaatgcaagctaaaaaagacagctgggtcatttttcttcatct |
46132344 |
T |
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