View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10610_low_4 (Length: 325)
Name: NF10610_low_4
Description: NF10610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10610_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 251
Target Start/End: Original strand, 2293906 - 2294148
Alignment:
| Q |
14 |
caacaataacacttttttctgattgaaaattgaaaacaagaaaaacaatagtactaaaacagtgcgtaatgtactactgtttagatagatacaaca---- |
109 |
Q |
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| T |
2293906 |
caacaataacacttttttctgattgaaaactgaaaacaagaaaaacaatagtacaaaaacagtgcgtaatgtactgctgtttagatagatacaacagatg |
2294005 |
T |
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| Q |
110 |
-aattaggatatggttctttttctctctcttcttttataaattgtcaaaaaatttaatttcgaatctgaggtttgataaacttacttagactgtaaattt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
2294006 |
aaattaggatatggttctttttctctctcttcttttataaattgtcaaaaaatttaatttcgaatctgaggtttgataaacttacttagaccgtaaattt |
2294105 |
T |
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| Q |
209 |
gcttcttttcgaaacggtccaattagatatcaccgtttgtacc |
251 |
Q |
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||||||||| ||||| | ||||||||||||||||||||||||| |
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| T |
2294106 |
gcttcttttggaaacagaccaattagatatcaccgtttgtacc |
2294148 |
T |
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