View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10611_high_13 (Length: 292)
Name: NF10611_high_13
Description: NF10611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10611_high_13 |
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Alignment Details
Target: chr8 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 24 - 280
Target Start/End: Original strand, 36952341 - 36952597
Alignment:
| Q |
24 |
ggttcacaattgactcctccacactgttctgtagacttctactggaaagattattgccctatggtcttcaggtattcattatcagaataacatgtatata |
123 |
Q |
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| T |
36952341 |
ggttcacaattgactcctccacactgttctgtagacttctactggaaagattattgccctatggtcttcaggtattcattatcagaataacatgtatata |
36952440 |
T |
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| Q |
124 |
ggttcttgatataatatgattttatgattattgtggtgtattagagttcttagtcagagttatgattataagcacatattctttatgtgatttcatatat |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36952441 |
ggttcttgatataatatgattttatgattattgtggtgtattagagttcttagtcaaagttatgattataagcacatattctttatgtgatttcatatat |
36952540 |
T |
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| Q |
224 |
ttccaggaatttgagagaaatgttcaaattggatgcggccgagtacatgatgtccat |
280 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36952541 |
ttccaggaatttgagagaaatgttcaaattggatgcggccgagtacatgatgtccat |
36952597 |
T |
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