View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10611_high_25 (Length: 227)
Name: NF10611_high_25
Description: NF10611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10611_high_25 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 37603069 - 37603285
Alignment:
| Q |
1 |
actcgccgggtatgttgatttaattccttggcataggtttggtttttgtgcttccaacaatgaaattttcaagtcaattaagggattcaaaagggtacat |
100 |
Q |
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| T |
37603069 |
actcgccgggtatgttgatttaattccttggcataggtttggtttttgtgcttccaacaatgaaattttcaagtcaattaagggattcaaaagggtacat |
37603168 |
T |
|
| Q |
101 |
attttagattttagcataacaccttgtatgcaatggcctacttttatagattctttggctaaattaccagaaggccctccttcacttagaatcacagttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37603169 |
attttagattttagcataacaccttgtatgcaatggcctacttttatagattctttggctaaattaccagaaggccctccttcacttagaatcacagttc |
37603268 |
T |
|
| Q |
201 |
catcttttaggcctatg |
217 |
Q |
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||||||||||||||||| |
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| T |
37603269 |
catcttttaggcctatg |
37603285 |
T |
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