View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10611_low_26 (Length: 253)
Name: NF10611_low_26
Description: NF10611
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10611_low_26 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 253
Target Start/End: Complemental strand, 26578433 - 26578186
Alignment:
| Q |
6 |
tcgagagagaagaatatgaattgaatgacgtgcacgagtggggtggatggagttagggccacccactgtgtccatgaagcaagctgaccaggtgctgcag |
105 |
Q |
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| T |
26578433 |
tcgagagatgagaatatgaattgaatgacgtgcacgagtggggtggatggagttagggccacccactgtgtccatgaagcaagctgaccaggtgctgcag |
26578334 |
T |
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| Q |
106 |
gctgacatatactcacagcgtagcatagcatagaatggcctgtgccctagccctactcatagacgttacaggatgatgacgtgatatattgtagattaaa |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26578333 |
gctgacatatactcacagcgtagcatagcatagaatggcctgtgccctagccctactcatagacgttacaggatgatgacgtgatatattgtagattaaa |
26578234 |
T |
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| Q |
206 |
atgattggttgatctatatattttgaacgtaagaggctatggtctggc |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26578233 |
atgattggttgatctatatattttgaacgtaagaggctatggtctggc |
26578186 |
T |
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