View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10613_low_8 (Length: 217)
Name: NF10613_low_8
Description: NF10613
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10613_low_8 |
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Alignment Details
Target: chr3 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 12 - 201
Target Start/End: Original strand, 53274010 - 53274197
Alignment:
| Q |
12 |
agatgaaggcatttcttgcaagcaataaatgagtgaaaaaattaagctgaaaagaaaagggagggaagaaagagtgagcatttgcaag---tagctaaac |
108 |
Q |
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| T |
53274010 |
agatgaaggcatttcttgcaagcaataaatgagtgaaaaaattcagctgaaaag-----ggagggaagaaagagtgagcatttgcaagaagtagctagac |
53274104 |
T |
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| Q |
109 |
ttattcttcaatgtgtaccttgatgatttgtttcttcatattattgggagttgtttcttacacaactaaggctagtttggcaacactagagct |
201 |
Q |
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| T |
53274105 |
ttattcttcaatgtgtaccttaatgatttatttcttcatattattgggagttgtttcttacacaactaaggctagtttggcaacaatagagct |
53274197 |
T |
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