View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10614_high_1 (Length: 487)
Name: NF10614_high_1
Description: NF10614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10614_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 7 - 469
Target Start/End: Complemental strand, 37702062 - 37701600
Alignment:
| Q |
7 |
agcacgggaatcatatatataatgaaagatatcgagcacaaaggaaactcataaccaatacaatgtttagaacaacaataaaaaagagaaacaaaatcga |
106 |
Q |
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| T |
37702062 |
agcacgggaatcatatatataatgaaagaaatcgagcacaaggggaactcctaaccaatacaatgtttagaacaagaataaaaaagagaaacaaaatcga |
37701963 |
T |
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| Q |
107 |
taatattgagcacaagaaccggaatacgaagaattcaaaatctagctcaaagacggaagagggttcggtaacatagttaatttaaatgggtaattaatga |
206 |
Q |
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| T |
37701962 |
taatattgagcacaagaaccagaatacgaagaattcaaaatctagctcaaagacggaagggggttcagtaacgtagttaatttaaatgggtgattaatga |
37701863 |
T |
|
| Q |
207 |
atataacaaatatcataattcattagttgtctactgaacacaaccataattttagacatcattaaccataaattgtaagggtatatttgaacacaaaata |
306 |
Q |
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| T |
37701862 |
atataacaaatatcgtaattcattagttgtctactgaacacaaccataattttagacatcattaaccataaattataagggtatatttgaacacaaaata |
37701763 |
T |
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| Q |
307 |
cgattaatgaattaaacccttgcaaatcatatatatttcaacataactttcttgattaatatatggttcatgatgttcattaaccacttatttgtcaacc |
406 |
Q |
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||||||||||||| ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37701762 |
cgattaatgaattgaacacttacaaatcatatatatttcatcataactttcttgattaatatatggttcatgatgttcattaaccacttatttgtcaacc |
37701663 |
T |
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| Q |
407 |
aatatttcaacgttgttaagcatctaatttatcgtccaaatttaatattaaatttgtgcgtga |
469 |
Q |
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| T |
37701662 |
aatatttgaacgttgttaagcatctaatttatcgtccaaatttaatattaagtttgtgcgtga |
37701600 |
T |
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