View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10614_low_2 (Length: 394)
Name: NF10614_low_2
Description: NF10614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10614_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 20 - 386
Target Start/End: Original strand, 37604451 - 37604817
Alignment:
| Q |
20 |
gaataatggggtgttgctgatttcttgcttttataatgcttatgcactttgctnnnnnnnntcaagtttgtaagatatgttcttatatatataaggtttc |
119 |
Q |
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| T |
37604451 |
gaataatggggtgttgctgatttcttgcttttataatgcttatgcactttgctaaaaaaaatcaagtttgtaagatatgttcttatatatataaggtttc |
37604550 |
T |
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| Q |
120 |
tttaattagaactatgttcttaacattttattcttttttagtttggtatgttttgttttcttctacgaaactataatgtgatgacaaataaacgatctat |
219 |
Q |
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| T |
37604551 |
tttaattagaactatgttcttaacattttattcttttttagtttggtatgttttgttttcttctacgaaactataatgtgatgacaaataaacgatctat |
37604650 |
T |
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| Q |
220 |
cattgtcatcctatcagcatctcggatggaagcactagtcgatacttgatagtgtactaggaatgatgctgatgcatgcaccatactacacggtcgtgaa |
319 |
Q |
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| T |
37604651 |
cattgtcatcctatcagcatctcggatggaagcactagtcgatacttgatagtttaataggaatgatgctgatgcatgcaccatactacacggtcgtgaa |
37604750 |
T |
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| Q |
320 |
gttaccctttgaaattaaaatattaaaacctttctttataactaagactatgacaacctttcttctc |
386 |
Q |
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| T |
37604751 |
gttaccctttgaaattaaaatattaaaacctttctttataactaagactatgacaacctttcttctc |
37604817 |
T |
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