View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10614_low_7 (Length: 247)
Name: NF10614_low_7
Description: NF10614
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10614_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 16 - 239
Target Start/End: Original strand, 35915529 - 35915752
Alignment:
| Q |
16 |
ttttcttccttccattttttcctattccacttaccaccacttcaacggcgcggcgaggcaacgcaagacggcccccgcttgcttgctgcctcagccatca |
115 |
Q |
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| T |
35915529 |
ttttcttccttccattttttcctattccacttaccaccacttcaacggcgcggcgaggcaacgcaagacggcccccgcttgcttgctgcctcagccatca |
35915628 |
T |
|
| Q |
116 |
tcattttcatcaaattaaaattaacactttcaatctgttgttaaagatatacaataattatttgtagctatgaacaaagaagagcaaaagtgtgacaaaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35915629 |
tcattttcatcaaattaaaattaacactttcaatctgttgttaaagatatacaataattatttgtagctatgaacaaagaagagcaaaagtgtgacaaaa |
35915728 |
T |
|
| Q |
216 |
tgtcattatcttcatcttcttctc |
239 |
Q |
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|||||||||||||||||||||||| |
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| T |
35915729 |
tgtcattatcttcatcttcttctc |
35915752 |
T |
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