View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10615_low_5 (Length: 347)

Name: NF10615_low_5
Description: NF10615
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10615_low_5
NF10615_low_5
[»] chr8 (98 HSPs)
chr8 (44-329)||(34665372-34665656)
chr8 (51-320)||(20091598-20091867)
chr8 (49-319)||(17841645-17841915)
chr8 (49-319)||(42754837-42755107)
chr8 (48-319)||(40779923-40780194)
chr8 (48-319)||(32064745-32065017)
chr8 (49-319)||(6108028-6108298)
chr8 (48-319)||(26041907-26042181)
chr8 (49-291)||(3596836-3597078)
chr8 (48-315)||(37985850-37986116)
chr8 (49-310)||(25581034-25581295)
chr8 (44-319)||(1645754-1646030)
chr8 (50-318)||(14128865-14129128)
chr8 (48-319)||(15187560-15187831)
chr8 (60-319)||(39772608-39772866)
chr8 (61-319)||(35353041-35353299)
chr8 (61-319)||(32393858-32394114)
chr8 (45-319)||(31347567-31347847)
chr8 (74-316)||(8453837-8454078)
chr8 (80-319)||(41819594-41819843)
chr8 (46-309)||(7021988-7022252)
chr8 (160-320)||(24211459-24211619)
chr8 (49-307)||(24844655-24844911)
chr8 (48-319)||(30834849-30835111)
chr8 (47-319)||(7017651-7017930)
chr8 (94-319)||(27835293-27835518)
chr8 (52-291)||(3890412-3890653)
chr8 (180-318)||(27782043-27782181)
chr8 (49-221)||(30055615-30055786)
chr8 (49-272)||(10044390-10044618)
chr8 (48-141)||(1503637-1503730)
chr8 (51-149)||(24211169-24211267)
chr8 (46-319)||(37132472-37132723)
chr8 (199-291)||(15972822-15972914)
chr8 (51-148)||(38017103-38017201)
chr8 (243-310)||(38016980-38017047)
chr8 (1-48)||(1421313-1421360)
chr8 (240-307)||(3890421-3890488)
chr8 (53-125)||(1645953-1646026)
chr8 (53-125)||(14128868-14128941)
chr8 (53-125)||(32064749-32064822)
chr8 (53-125)||(32393862-32393935)
chr8 (53-125)||(34665386-34665459)
chr8 (53-125)||(35353045-35353118)
chr8 (53-125)||(37986043-37986116)
chr8 (242-307)||(1503650-1503714)
chr8 (238-291)||(3817914-3817967)
chr8 (61-125)||(6108221-6108286)
chr8 (242-307)||(17841657-17841721)
chr8 (53-125)||(17841838-17841911)
chr8 (242-307)||(20091608-20091672)
chr8 (53-125)||(20091789-20091862)
chr8 (242-307)||(26041920-26041984)
chr8 (242-307)||(30834862-30834927)
chr8 (53-125)||(31347770-31347843)
chr8 (242-307)||(34665575-34665639)
chr8 (242-307)||(37132487-37132552)
chr8 (242-307)||(40779936-40780000)
chr8 (53-125)||(40780117-40780190)
chr8 (61-125)||(42755030-42755095)
chr8 (240-308)||(35353233-35353300)
chr8 (240-315)||(24844659-24844734)
chr8 (52-125)||(24844847-24844920)
chr8 (242-307)||(6108040-6108104)
chr8 (53-125)||(7017853-7017926)
chr8 (61-125)||(7021990-7022055)
chr8 (53-125)||(8453838-8453911)
chr8 (242-307)||(10044542-10044606)
chr8 (242-307)||(14129053-14129117)
chr8 (53-125)||(15187564-15187637)
chr8 (53-125)||(24211541-24211614)
chr8 (53-125)||(26042104-26042177)
chr8 (53-125)||(27782105-27782178)
chr8 (242-307)||(31347583-31347647)
chr8 (242-307)||(37985863-37985927)
chr8 (61-125)||(39772789-39772854)
chr8 (61-125)||(30835035-30835099)
chr8 (53-120)||(37132651-37132719)
chr8 (61-124)||(38016983-38017047)
chr8 (256-307)||(1886621-1886672)
chr8 (240-307)||(30055708-30055774)
chr8 (239-319)||(30055543-30055616)
chr8 (242-307)||(24211179-24211243)
chr8 (242-307)||(25581046-25581110)
chr8 (53-125)||(27835441-27835514)
chr8 (242-307)||(32064940-32065004)
chr8 (242-291)||(41819590-41819639)
chr8 (61-125)||(41819766-41819831)
chr8 (242-307)||(42754849-42754913)
chr8 (54-125)||(25581227-25581299)
chr8 (242-307)||(1645771-1645835)
chr8 (80-125)||(3817918-3817963)
chr8 (80-125)||(3890605-3890649)
chr8 (242-279)||(8454027-8454064)
chr8 (242-307)||(15187754-15187818)
chr8 (80-125)||(15972865-15972910)
chr8 (242-307)||(39772609-39772673)
chr8 (242-310)||(32394051-32394117)
[»] chr6 (55 HSPs)
chr6 (47-319)||(33696696-33696969)
chr6 (47-319)||(28675148-28675420)
chr6 (45-319)||(17705260-17705530)
chr6 (49-319)||(33695121-33695392)
chr6 (49-319)||(2309218-2309488)
chr6 (49-319)||(17175816-17176086)
chr6 (49-319)||(18365369-18365638)
chr6 (49-319)||(18370633-18370902)
chr6 (47-319)||(23290874-23291149)
chr6 (47-308)||(32702216-32702477)
chr6 (51-320)||(6031537-6031807)
chr6 (51-310)||(11548386-11548644)
chr6 (91-319)||(6127275-6127505)
chr6 (118-319)||(9752110-9752309)
chr6 (160-319)||(25986930-25987089)
chr6 (87-316)||(8515560-8515787)
chr6 (47-149)||(29693615-29693718)
chr6 (240-319)||(18889683-18889761)
chr6 (91-149)||(18889481-18889539)
chr6 (53-125)||(6127279-6127352)
chr6 (53-125)||(23291072-23291145)
chr6 (49-127)||(582522-582602)
chr6 (53-125)||(17705453-17705526)
chr6 (242-307)||(29693639-29693704)
chr6 (53-125)||(33695315-33695388)
chr6 (53-125)||(33696700-33696773)
chr6 (53-125)||(18365561-18365634)
chr6 (53-125)||(18370825-18370898)
chr6 (50-115)||(34238883-34238948)
chr6 (55-125)||(11548576-11548647)
chr6 (242-315)||(582526-582600)
chr6 (242-307)||(11548396-11548460)
chr6 (53-125)||(17176009-17176082)
chr6 (53-125)||(25986934-25987007)
chr6 (53-125)||(28675152-28675225)
chr6 (242-307)||(28675342-28675406)
chr6 (53-125)||(18889685-18889757)
chr6 (53-115)||(8515723-8515786)
chr6 (242-296)||(2309241-2309294)
chr6 (242-307)||(6031547-6031611)
chr6 (53-125)||(6031729-6031802)
chr6 (80-125)||(9752233-9752278)
chr6 (242-307)||(17175828-17175892)
chr6 (242-307)||(32702399-32702463)
chr6 (242-307)||(33696891-33696955)
chr6 (49-103)||(2121004-2121059)
chr6 (160-215)||(29693542-29693597)
chr6 (252-307)||(34238894-34238948)
chr6 (256-286)||(18889593-18889623)
chr6 (88-125)||(2309411-2309448)
chr6 (242-307)||(17705276-17705339)
chr6 (242-307)||(18365381-18365445)
chr6 (242-307)||(18370645-18370709)
chr6 (242-279)||(18889478-18889515)
chr6 (61-125)||(32702217-32702282)
[»] chr7 (59 HSPs)
chr7 (51-319)||(4974532-4974800)
chr7 (48-320)||(42611810-42612082)
chr7 (48-319)||(48880721-48880992)
chr7 (47-319)||(3961979-3962250)
chr7 (48-319)||(45637712-45637982)
chr7 (49-319)||(24394972-24395241)
chr7 (49-319)||(34482835-34483108)
chr7 (44-319)||(15329273-15329549)
chr7 (44-319)||(15577637-15577915)
chr7 (49-319)||(25167651-25167915)
chr7 (49-291)||(30848597-30848839)
chr7 (48-319)||(42696083-42696355)
chr7 (58-315)||(29737143-29737406)
chr7 (50-319)||(37476876-37477145)
chr7 (51-319)||(20009895-20010162)
chr7 (46-319)||(18036978-18037250)
chr7 (48-319)||(15238382-15238655)
chr7 (163-319)||(35444558-35444714)
chr7 (196-316)||(36790408-36790528)
chr7 (48-149)||(35445567-35445668)
chr7 (49-149)||(35876414-35876514)
chr7 (177-293)||(40880715-40880831)
chr7 (53-125)||(34482839-34482912)
chr7 (53-125)||(4974723-4974796)
chr7 (53-125)||(42611815-42611888)
chr7 (242-315)||(42696277-42696350)
chr7 (53-125)||(45637716-45637789)
chr7 (53-122)||(15577841-15577911)
chr7 (53-125)||(3961983-3962056)
chr7 (53-125)||(15329277-15329350)
chr7 (61-125)||(18036990-18037055)
chr7 (242-307)||(25167663-25167727)
chr7 (53-125)||(25167838-25167911)
chr7 (53-125)||(29737143-29737216)
chr7 (242-315)||(34483032-34483104)
chr7 (53-125)||(36790454-36790527)
chr7 (53-125)||(37477068-37477141)
chr7 (53-125)||(48880915-48880988)
chr7 (242-307)||(4974542-4974606)
chr7 (53-125)||(24394976-24395049)
chr7 (242-307)||(29737338-29737403)
chr7 (53-125)||(35444562-35444635)
chr7 (242-307)||(48880734-48880798)
chr7 (49-115)||(40880641-40880706)
chr7 (242-307)||(3962172-3962236)
chr7 (80-125)||(15238414-15238459)
chr7 (53-125)||(20010086-20010158)
chr7 (242-307)||(24395165-24395229)
chr7 (80-125)||(30848601-30848646)
chr7 (242-307)||(30848763-30848827)
chr7 (242-307)||(35445591-35445655)
chr7 (242-307)||(37476887-37476951)
chr7 (242-307)||(45637905-45637969)
chr7 (242-293)||(18037171-18037222)
chr7 (240-307)||(20009905-20009972)
chr7 (242-307)||(15329468-15329532)
chr7 (242-307)||(15577654-15577718)
chr7 (49-113)||(36790271-36790336)
chr7 (242-307)||(42612005-42612069)
[»] chr3 (82 HSPs)
chr3 (47-319)||(3137207-3137479)
chr3 (47-319)||(6041884-6042149)
chr3 (51-319)||(33145713-33145980)
chr3 (49-319)||(3574321-3574592)
chr3 (45-319)||(33113793-33114068)
chr3 (49-319)||(2754717-2754989)
chr3 (45-319)||(22426136-22426409)
chr3 (47-319)||(3456064-3456336)
chr3 (47-319)||(37216846-37217118)
chr3 (49-319)||(19650695-19650965)
chr3 (49-319)||(37522053-37522323)
chr3 (50-319)||(8320378-8320649)
chr3 (47-319)||(48160905-48161178)
chr3 (46-319)||(36864824-36865092)
chr3 (49-281)||(3089455-3089689)
chr3 (49-307)||(47738117-47738382)
chr3 (49-318)||(9796824-9797093)
chr3 (61-319)||(33839531-33839794)
chr3 (49-319)||(24343547-24343820)
chr3 (160-319)||(30385011-30385170)
chr3 (47-319)||(8361832-8362110)
chr3 (160-319)||(42297353-42297513)
chr3 (177-319)||(34482833-34482975)
chr3 (160-319)||(11347268-11347427)
chr3 (48-319)||(41224233-41224505)
chr3 (91-263)||(42297920-42298090)
chr3 (47-247)||(40327897-40328104)
chr3 (64-291)||(41883031-41883260)
chr3 (47-149)||(34482681-34482783)
chr3 (195-308)||(42921154-42921267)
chr3 (49-149)||(30385570-30385670)
chr3 (46-149)||(42921295-42921399)
chr3 (49-149)||(26612916-26613017)
chr3 (214-319)||(26612785-26612890)
chr3 (50-262)||(46918959-46919164)
chr3 (53-125)||(3574515-3574588)
chr3 (242-315)||(47738305-47738378)
chr3 (53-125)||(33145717-33145789)
chr3 (53-125)||(2754721-2754794)
chr3 (53-125)||(3456068-3456141)
chr3 (53-125)||(11347272-11347345)
chr3 (53-125)||(37217041-37217114)
chr3 (242-307)||(40328025-40328090)
chr3 (53-125)||(48160909-48160982)
chr3 (242-310)||(33839729-33839797)
chr3 (242-307)||(3137221-3137285)
chr3 (53-125)||(3137402-3137475)
chr3 (53-125)||(6041888-6041961)
chr3 (242-315)||(26612940-26613013)
chr3 (53-125)||(33113797-33113870)
chr3 (242-307)||(34482695-34482759)
chr3 (242-307)||(36864839-36864904)
chr3 (242-315)||(46919088-46919161)
chr3 (53-125)||(42297357-42297431)
chr3 (61-125)||(8320572-8320637)
chr3 (242-307)||(8361846-8361910)
chr3 (80-125)||(8362033-8362078)
chr3 (61-125)||(9797017-9797082)
chr3 (61-125)||(19650888-19650953)
chr3 (61-125)||(22426332-22426397)
chr3 (242-315)||(24343743-24343816)
chr3 (242-307)||(30385594-30385658)
chr3 (242-307)||(33113988-33114052)
chr3 (242-307)||(33145906-33145970)
chr3 (242-307)||(37522247-37522311)
chr3 (242-307)||(41224428-41224492)
chr3 (88-125)||(3089457-3089494)
chr3 (242-307)||(6042071-6042135)
chr3 (242-307)||(8320389-8320453)
chr3 (242-307)||(9796836-9796900)
chr3 (242-307)||(22426152-22426216)
chr3 (53-125)||(30385015-30385088)
chr3 (53-125)||(34482898-34482971)
chr3 (53-121)||(36865019-36865088)
chr3 (242-307)||(37216860-37216924)
chr3 (61-125)||(37522065-37522130)
chr3 (80-125)||(41883211-41883256)
chr3 (242-307)||(42921319-42921384)
chr3 (282-316)||(40327878-40327912)
chr3 (242-307)||(3089613-3089677)
chr3 (242-307)||(19650707-19650771)
chr3 (61-125)||(33839543-33839608)
[»] chr4 (84 HSPs)
chr4 (49-319)||(44893426-44893696)
chr4 (47-319)||(31078612-31078884)
chr4 (45-319)||(47290066-47290340)
chr4 (48-319)||(44893007-44893279)
chr4 (47-319)||(46441844-46442116)
chr4 (47-319)||(53123030-53123303)
chr4 (51-319)||(24128239-24128507)
chr4 (48-319)||(21802114-21802387)
chr4 (48-318)||(7744906-7745176)
chr4 (44-315)||(36073354-36073624)
chr4 (48-319)||(10442581-10442854)
chr4 (47-319)||(49387680-49387953)
chr4 (44-319)||(22199261-22199534)
chr4 (47-319)||(4751446-4751719)
chr4 (47-320)||(36072946-36073223)
chr4 (51-291)||(9088898-9089138)
chr4 (48-319)||(50156373-50156643)
chr4 (59-319)||(23964269-23964530)
chr4 (47-319)||(2624837-2625109)
chr4 (51-287)||(17655462-17655699)
chr4 (49-319)||(33530479-33530753)
chr4 (46-319)||(24392667-24392947)
chr4 (48-319)||(37934735-37935006)
chr4 (49-310)||(42671678-42671939)
chr4 (80-291)||(30563237-30563448)
chr4 (46-273)||(37219671-37219905)
chr4 (177-306)||(36073666-36073795)
chr4 (47-275)||(11314044-11314255)
chr4 (50-302)||(44744452-44744698)
chr4 (53-125)||(7745100-7745173)
chr4 (53-125)||(33530676-33530749)
chr4 (242-315)||(37219825-37219898)
chr4 (49-122)||(25063369-25063443)
chr4 (53-125)||(10442777-10442850)
chr4 (53-125)||(31078807-31078880)
chr4 (49-141)||(36073256-36073349)
chr4 (53-125)||(49387876-49387949)
chr4 (55-125)||(42671675-42671746)
chr4 (245-307)||(25063381-25063443)
chr4 (53-125)||(2624841-2624914)
chr4 (53-125)||(21802310-21802383)
chr4 (53-125)||(22199265-22199338)
chr4 (61-125)||(23964453-23964518)
chr4 (53-125)||(24392671-24392744)
chr4 (53-125)||(36072951-36073024)
chr4 (242-307)||(36073543-36073607)
chr4 (242-315)||(42671862-42671935)
chr4 (53-125)||(44893430-44893503)
chr4 (53-125)||(46441848-46441921)
chr4 (242-307)||(46442038-46442102)
chr4 (53-125)||(47290070-47290143)
chr4 (242-315)||(49387686-49387758)
chr4 (53-125)||(50156566-50156639)
chr4 (243-307)||(11314058-11314122)
chr4 (53-125)||(53123034-53123108)
chr4 (53-125)||(4751450-4751523)
chr4 (242-315)||(7744911-7744983)
chr4 (242-307)||(9089064-9089128)
chr4 (242-307)||(10442594-10442658)
chr4 (242-307)||(21802127-21802191)
chr4 (53-125)||(24128243-24128316)
chr4 (53-125)||(36073354-36073427)
chr4 (242-307)||(44893020-44893084)
chr4 (242-307)||(44893620-44893684)
chr4 (242-307)||(47290260-47290324)
chr4 (242-315)||(50156378-50156449)
chr4 (242-307)||(53123225-53123289)
chr4 (79-125)||(17655461-17655507)
chr4 (53-125)||(44893201-44893275)
chr4 (80-125)||(9088902-9088947)
chr4 (242-307)||(22199453-22199517)
chr4 (242-307)||(31078626-31078690)
chr4 (242-307)||(36073145-36073209)
chr4 (62-125)||(36073731-36073795)
chr4 (172-247)||(9111337-9111412)
chr4 (242-307)||(4751641-4751705)
chr4 (242-307)||(17655624-17655689)
chr4 (242-307)||(23964271-23964335)
chr4 (242-307)||(24128433-24128497)
chr4 (242-307)||(24392868-24392932)
chr4 (242-291)||(30563403-30563452)
chr4 (242-307)||(33530491-33530555)
chr4 (53-125)||(37934929-37935002)
chr4 (66-125)||(44744452-44744512)
[»] chr2 (53 HSPs)
chr2 (49-319)||(23267857-23268127)
chr2 (49-319)||(9293370-9293641)
chr2 (49-319)||(33380207-33380477)
chr2 (49-319)||(35160757-35161029)
chr2 (49-318)||(10661888-10662158)
chr2 (44-319)||(7475298-7475573)
chr2 (52-316)||(31174633-31174896)
chr2 (46-319)||(13354846-13355121)
chr2 (53-291)||(3989104-3989342)
chr2 (91-319)||(21936081-21936310)
chr2 (48-319)||(43330912-43331183)
chr2 (49-319)||(9723405-9723677)
chr2 (91-319)||(14941201-14941431)
chr2 (51-322)||(21393483-21393756)
chr2 (160-319)||(27847632-27847791)
chr2 (177-314)||(22591487-22591624)
chr2 (80-309)||(16767288-16767527)
chr2 (44-247)||(40262526-40262729)
chr2 (45-149)||(22592880-22592987)
chr2 (203-279)||(37335753-37335829)
chr2 (47-139)||(34320961-34321042)
chr2 (53-125)||(10661891-10661964)
chr2 (53-125)||(35160761-35160834)
chr2 (241-307)||(22592905-22592971)
chr2 (70-139)||(37335824-37335894)
chr2 (53-125)||(14941354-14941427)
chr2 (43-125)||(31174822-31174905)
chr2 (53-125)||(9293564-9293637)
chr2 (242-315)||(9723600-9723673)
chr2 (53-125)||(21393676-21393749)
chr2 (53-125)||(21936085-21936158)
chr2 (53-125)||(23268050-23268123)
chr2 (53-125)||(33380211-33380284)
chr2 (242-307)||(33380401-33380465)
chr2 (242-307)||(35160953-35161017)
chr2 (53-125)||(43330916-43330989)
chr2 (80-125)||(3989108-3989153)
chr2 (242-307)||(9293382-9293446)
chr2 (53-125)||(9723409-9723482)
chr2 (242-307)||(10662082-10662146)
chr2 (242-307)||(23267869-23267933)
chr2 (49-94)||(39819272-39819317)
chr2 (242-280)||(34320990-34321028)
chr2 (282-316)||(40262714-40262748)
chr2 (242-307)||(7475315-7475379)
chr2 (53-125)||(7475496-7475569)
chr2 (61-125)||(13354858-13354923)
chr2 (242-307)||(21393493-21393556)
chr2 (242-307)||(43331106-43331170)
chr2 (242-307)||(13355042-13355106)
chr2 (61-125)||(27847644-27847709)
chr2 (242-290)||(16767285-16767333)
chr2 (47-79)||(27847801-27847833)
[»] chr5 (60 HSPs)
chr5 (44-320)||(25398237-25398513)
chr5 (48-319)||(4892202-4892473)
chr5 (49-319)||(33584124-33584394)
chr5 (49-319)||(6043307-6043576)
chr5 (48-319)||(3521801-3522071)
chr5 (48-319)||(14138668-14138938)
chr5 (49-315)||(8145379-8145643)
chr5 (49-319)||(2477636-2477906)
chr5 (50-319)||(3362778-3363048)
chr5 (52-319)||(12850801-12851069)
chr5 (48-319)||(37321587-37321859)
chr5 (49-319)||(38899520-38899791)
chr5 (70-319)||(11360947-11361196)
chr5 (49-319)||(22912852-22913119)
chr5 (90-319)||(4433844-4434072)
chr5 (48-320)||(12614531-12614799)
chr5 (48-319)||(17545476-17545750)
chr5 (80-291)||(31640767-31640977)
chr5 (66-315)||(27481830-27482077)
chr5 (53-125)||(2477640-2477713)
chr5 (53-125)||(11361119-11361192)
chr5 (53-125)||(4892206-4892279)
chr5 (53-125)||(22913042-22913115)
chr5 (53-125)||(25398242-25398315)
chr5 (251-307)||(10458409-10458465)
chr5 (242-307)||(4892396-4892460)
chr5 (53-125)||(6043499-6043572)
chr5 (61-125)||(8145387-8145452)
chr5 (242-307)||(22912864-22912928)
chr5 (242-307)||(33584136-33584200)
chr5 (53-125)||(33584317-33584390)
chr5 (53-125)||(37321781-37321855)
chr5 (53-125)||(3362782-3362855)
chr5 (242-307)||(3521814-3521878)
chr5 (53-125)||(4433995-4434068)
chr5 (242-307)||(6043319-6043383)
chr5 (242-307)||(8145567-8145631)
chr5 (53-125)||(12614721-12614794)
chr5 (242-307)||(12850996-12851060)
chr5 (242-307)||(25398432-25398496)
chr5 (242-307)||(38899532-38899597)
chr5 (53-125)||(38899714-38899787)
chr5 (91-141)||(13664737-13664787)
chr5 (160-230)||(36880229-36880299)
chr5 (242-307)||(12614544-12614609)
chr5 (53-125)||(12850805-12850878)
chr5 (282-319)||(13664642-13664679)
chr5 (61-125)||(14138680-14138745)
chr5 (242-307)||(14138861-14138925)
chr5 (80-125)||(17545673-17545718)
chr5 (241-302)||(27482016-27482077)
chr5 (242-307)||(37321600-37321664)
chr5 (61-116)||(10458409-10458465)
chr5 (108-149)||(36880171-36880213)
chr5 (242-307)||(3362973-3363037)
chr5 (61-125)||(3521994-3522059)
chr5 (46-79)||(12614483-12614516)
chr5 (242-279)||(13664753-13664790)
chr5 (254-291)||(31640763-31640800)
chr5 (80-125)||(31640928-31640973)
[»] scaffold0228 (8 HSPs)
scaffold0228 (45-308)||(25947-26210)
scaffold0228 (45-308)||(15995-16258)
scaffold0228 (118-308)||(8413-8603)
scaffold0228 (61-125)||(8414-8479)
scaffold0228 (61-125)||(15996-16061)
scaffold0228 (61-125)||(25948-26013)
scaffold0228 (242-307)||(26130-26194)
scaffold0228 (242-307)||(16178-16242)
[»] chr1 (67 HSPs)
chr1 (50-319)||(40214988-40215257)
chr1 (48-319)||(19015404-19015675)
chr1 (47-319)||(36966501-36966773)
chr1 (49-319)||(37821629-37821899)
chr1 (49-319)||(6883487-6883757)
chr1 (49-319)||(25463676-25463946)
chr1 (46-319)||(41876234-41876507)
chr1 (47-320)||(44094697-44094969)
chr1 (47-319)||(18404442-18404720)
chr1 (45-319)||(51737510-51737779)
chr1 (49-319)||(9910086-9910358)
chr1 (49-319)||(25973414-25973677)
chr1 (49-316)||(3559620-3559887)
chr1 (49-319)||(32000061-32000332)
chr1 (51-319)||(40273702-40273976)
chr1 (45-246)||(20304921-20305123)
chr1 (47-310)||(27523048-27523311)
chr1 (46-307)||(33786423-33786687)
chr1 (45-319)||(44690812-44691094)
chr1 (202-315)||(16045746-16045859)
chr1 (203-329)||(34519748-34519874)
chr1 (46-291)||(10167428-10167673)
chr1 (49-125)||(19722894-19722970)
chr1 (243-315)||(44690820-44690892)
chr1 (53-125)||(25463680-25463753)
chr1 (52-125)||(33786623-33786696)
chr1 (242-315)||(9910090-9910162)
chr1 (53-125)||(16045786-16045859)
chr1 (53-125)||(40214992-40215065)
chr1 (53-125)||(40273706-40273779)
chr1 (240-315)||(27523054-27523129)
chr1 (53-125)||(3559621-3559694)
chr1 (53-125)||(18404446-18404519)
chr1 (242-307)||(19015598-19015662)
chr1 (242-307)||(32000073-32000137)
chr1 (242-307)||(33786438-33786502)
chr1 (242-307)||(40273902-40273966)
chr1 (53-125)||(44094702-44094775)
chr1 (242-307)||(51737699-51737763)
chr1 (49-149)||(22157333-22157433)
chr1 (50-121)||(52064373-52064445)
chr1 (91-149)||(52329445-52329503)
chr1 (53-125)||(6883491-6883564)
chr1 (242-307)||(6883681-6883745)
chr1 (53-125)||(9910281-9910354)
chr1 (53-125)||(19015408-19015481)
chr1 (242-315)||(19722898-19722970)
chr1 (242-307)||(20304937-20305001)
chr1 (53-125)||(32000255-32000328)
chr1 (53-125)||(36966696-36966769)
chr1 (242-307)||(37821641-37821705)
chr1 (53-125)||(37821822-37821895)
chr1 (242-307)||(40215182-40215246)
chr1 (242-307)||(41876249-41876313)
chr1 (53-121)||(41876434-41876503)
chr1 (246-307)||(52064384-52064445)
chr1 (63-125)||(27523243-27523306)
chr1 (196-247)||(51621002-51621053)
chr1 (160-243)||(52329345-52329427)
chr1 (242-307)||(25463870-25463934)
chr1 (242-307)||(25973601-25973665)
chr1 (282-319)||(52329319-52329356)
chr1 (242-279)||(52329469-52329506)
chr1 (242-307)||(18404642-18404706)
chr1 (211-248)||(22159230-22159267)
chr1 (61-125)||(25973426-25973490)
chr1 (282-319)||(51620980-51621017)
[»] scaffold0204 (2 HSPs)
scaffold0204 (49-319)||(4396-4666)
scaffold0204 (53-125)||(4400-4473)
[»] scaffold0178 (3 HSPs)
scaffold0178 (49-319)||(11621-11891)
scaffold0178 (53-125)||(11625-11698)
scaffold0178 (242-315)||(11815-11887)
[»] scaffold0471 (3 HSPs)
scaffold0471 (51-319)||(12842-13110)
scaffold0471 (53-125)||(12846-12919)
scaffold0471 (242-307)||(13036-13100)
[»] scaffold0085 (3 HSPs)
scaffold0085 (49-320)||(47849-48119)
scaffold0085 (53-125)||(47854-47927)
scaffold0085 (242-307)||(48043-48107)
[»] scaffold0096 (2 HSPs)
scaffold0096 (49-319)||(41011-41280)
scaffold0096 (53-125)||(41015-41088)
[»] scaffold0665 (2 HSPs)
scaffold0665 (195-318)||(3069-3192)
scaffold0665 (53-125)||(3072-3145)
[»] scaffold0041 (2 HSPs)
scaffold0041 (177-293)||(85452-85568)
scaffold0041 (49-115)||(85577-85642)


Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 98)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 44 - 329
Target Start/End: Complemental strand, 34665656 - 34665372
Alignment:
Q  44 taaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 143  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34665656 taaaagaaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 34665557  T
Q  144 tttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    ||||||          ||||||||||| | ||  ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34665556 tttcataaaaaaaaa-tacataacacccaccactccatgattttcggccaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 34665458  T
Q  244 atctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctcgatgtaaaat 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  34665457 atctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcgttttaaaat 34665372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 51 - 320
Target Start/End: Original strand, 20091598 - 20091867
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatn 150  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  20091598 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 20091697  T
Q  151 nnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaag 250  Q
             ||||||||||| | || ||||||||||||||  | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20091698 aaaaaaaaatacataacacccaccaccccatgatttccggctaggctgagattttattggctaacattaatttcaggacgatttcttgataaaatctaag 20091797  T
Q  251 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctcg 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  20091798 ggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctcg 20091867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 17841645 - 17841915
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  17841645 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 17841744  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  17841745 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatcta 17841844  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  17841845 agggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 17841915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 42754837 - 42755107
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  42754837 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 42754936  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | ||||||||||||| ||| || |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  42754937 taaaaaaaaaatacataacacccaccatcccatgattttcggccaggctgagattttattggttaacattaatttcatgactatttcttgataaaatcta 42755036  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42755037 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatatcattgctc 42755107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 40779923 - 40780194
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  40779923 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 40780022  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||| | | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  40780023 ataaaaaaaagatacataacatccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 40780122  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  40780123 aagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 40780194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 48 - 319
Target Start/End: Complemental strand, 32065017 - 32064745
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  32065017 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttc 32064918  T
Q  148 atnnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    ||           ||||||||||| |||| |||||||||||||| || |||||||||||||||| ||||||||||||||| |  ||||||||||||||||    
T  32064917 ataaaaaaaaagatacataacacccatcagcccatgatttccggccaggctgagattttattggttaacattaatttcagaattatttcttgataaaatc 32064818  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32064817 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 32064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 6108028 - 6108298
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  6108028 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 6108127  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  6108128 taaaaagaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatcta 6108227  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||    
T  6108228 agggtgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatataacattgctc 6108298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 26041907 - 26042181
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  26041907 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 26042006  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa--- 244  Q
    ||          ||||||||||| | || ||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||       
T  26042007 ataaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaaaaaa 26042106  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  26042107 tctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcattgctc 26042181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 49 - 291
Target Start/End: Original strand, 3596836 - 3597078
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  3596836 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttca 3596935  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || ||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  3596936 taaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaaatcta 3597035  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgata 291  Q
    ||||| |||||||||||||||||||||||||| ||||||||||    
T  3597036 agggtaattattctgccatgtcattcttgaaactttcttgata 3597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 48 - 315
Target Start/End: Original strand, 37985850 - 37986116
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  37985850 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtcccatttattaatctttc 37985949  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | || |||||||||||||| ||  |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  37985950 ataaaaaaaaa-tacataacacccaccaccccatgatttccggccagactgagattttattggctagcattaatttcaggactatttcttgataaaatct 37986048  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  37986049 aagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 49 - 310
Target Start/End: Original strand, 25581034 - 25581295
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| |||||||||||||||||||||||| ||||||    
T  25581034 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacataacacaataatcacctttagatttcagtctcatttattaatctttca 25581133  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || ||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  25581134 taaaaaaaagatacataacacccaccaccccatgatttccggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaaatcta 25581233  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatata 310  Q
    | |||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||||||    
T  25581234 aaggtgattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatata 25581295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 44 - 319
Target Start/End: Original strand, 1645754 - 1646030
Alignment:
Q  44 taaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 143  Q
    |||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  1645754 taaaaggaaaatgctagatatcaagaatgattttataagaaagaaccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 1645853  T
Q  144 tttcatnnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataa 242  Q
    ||||||           ||||||||||| | || |||||||||||||  || |||||||||||||| |||||||||||||||| ||| ||||||||||||    
T  1645854 tttcataaaaaaaaaaatacataacacccaccaccccatgatttccgaccaggctgagattttattagctaacattaatttcaagactatttcttgataa 1645953  T
Q  243 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  1645954 aatctaagggtgattattctgccatgtctttcttaaaattttcttgataaaatctttcttgatatatagcattgctc 1646030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 50 - 318
Target Start/End: Complemental strand, 14129128 - 14128865
Alignment:
Q  50 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 149  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  14129128 gaaaatgctagatatcaagaatgattttataagaaatattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 14129029  T
Q  150 nnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaa 249  Q
              ||||||||||| | || || ||||||| |||     |||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  14129028 aaaaaaaaaatacataacacccaccaccctatgattttcgg-----ctgagattttattggctaacattaatttcaagactatttcttgataaaatctaa 14128934  T
Q  250 gggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgct 318  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||    
T  14128933 gggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcattgct 14128865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 48 - 319
Target Start/End: Complemental strand, 15187831 - 15187560
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  15187831 aggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttc 15187732  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagct-gagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    ||          ||||||||||| | ||  ||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  15187731 ataaaaaaaaa-tacataacacccaccactccatgatttccggccaggctagagattttattggctaacattaatttcaagactatttcttgataaaatc 15187633  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15187632 taagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 15187560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 60 - 319
Target Start/End: Original strand, 39772608 - 39772866
Alignment:
Q  60 gatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnn 159  Q
    |||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||| |||||||||||| || |||||||| |||||||              
T  39772608 gatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtttcgtttattaatctttcataaaaaaaaaa 39772707  T
Q  160 tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattat 259  Q
    ||||||||||| | ||||||||||||||||| |  ||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  39772708 tacataacacccaccatcccatgatttccgg-ctggctgagattttattggctaacattaatttcaagactattttttgataaaatctaagggtgattat 39772806  T
Q  260 tctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  39772807 tctgccatgtcattcttgaaatttttttgataaaatatttcttgatatataacattgctc 39772866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 61 - 319
Target Start/End: Complemental strand, 35353299 - 35353041
Alignment:
Q  61 atatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnnt 160  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| | ||||||||||||| |||||||          |    
T  35353299 atatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttaaattttaatctcatttattaatctttcataaaaaaaagat 35353200  T
Q  161 acataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattatt 260  Q
    |||||||||| | || | |||||||||||| || |||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||||||||||||    
T  35353199 acataacacccaccacctcatgatttccggccaggctgagattttattggttaacattaatttcatgattatttcttgataaaatctaagggtgattatt 35353100  T
Q  261 ctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  35353099 ctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 35353041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 61 - 319
Target Start/End: Complemental strand, 32394114 - 32393858
Alignment:
Q  61 atatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnnt 160  Q
    ||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||          |    
T  32394114 atatcaagaatgattttataaaaaatatttaagaatgacatg-cacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaaa-t 32394017  T
Q  161 acataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattatt 260  Q
    |||||||||| | || |||||||||| |||  |  |||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  32394016 acataacacctaccaccccatgattttcggctagactgagattttattggctaacattaatttcaagactatttcttgataaaatttaagggtgattatt 32393917  T
Q  261 ctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  32393916 ctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 32393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 45 - 319
Target Start/End: Original strand, 31347567 - 31347847
Alignment:
Q  45 aaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcattta--ttaa- 141  Q
    ||||||||||||||||||||||||||||||||   |||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||  |||      
T  31347567 aaaaggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttaatttatt 31347666  T
Q  142 cctttcatnnnnnnnnnn---tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttg 238  Q
    ||||||||             ||||||||||| |  | ||||||||||| || |   | |||||||||||||||||||||||||||||||||||||||||    
T  31347667 cctttcataaaaaaaaaaaaatacataacacccactaccccatgatttctggcccgacagagattttattggctaacattaatttcaggacaatttcttg 31347766  T
Q  239 ataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||    
T  31347767 ataaaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcattgctc 31347847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 74 - 316
Target Start/End: Complemental strand, 8454078 - 8453837
Alignment:
Q  74 ttttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnntacataacaccaat 173  Q
    ||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||          ||||||||||| |     
T  8454078 ttttataagaagaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcataaaaaaaga-tacataacacccac 8453980  T
Q  174 catcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcatt 273  Q
    ||  |||| |||||||| || |||||||||||||||  | |||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||    
T  8453979 cacaccataatttccggccaggctgagattttattgtgttacattaatttcaggactatttcttgataaaatctaagggtgattattttgtcatgtcatt 8453880  T
Q  274 cttgaaattttcttgataaaatctttcttgatatataacattg 316  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  8453879 cttgaaattttcttgaaaaaatctttcttgatatatagcattg 8453837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 80 - 319
Target Start/End: Original strand, 41819594 - 41819843
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnn----------tacataacac 169  Q
    |||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||                    ||||||||||    
T  41819594 aagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacctatcataaaaaaaaaaaaaaaaaaaatacataacac 41819693  T
Q  170 caatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgt 269  Q
      | || |||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  41819694 acaccaccccatgatttccggccgggctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatat 41819793  T
Q  270 cattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||| |||  |||||||||||||||||||||||||||||||||||||    
T  41819794 cattcttaaaacattcttgataaaatctttcttgatatataacattgctc 41819843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 46 - 309
Target Start/End: Complemental strand, 7022252 - 7021988
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt 145  Q
    |||||||||||||||||||||| ||||||||   |||||| ||| |||||||||| | |||||||||| |||||||||||||||||||||||||  ||||    
T  7022252 aaaggaaaatgctagatatcaacaatgatttatcaagaaagattcaagaatgacaagtcacaataatcgcccttagatttcagtctcatttatt--cctt 7022155  T
Q  146 tcatnnnnnnnnnn---tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataa 242  Q
    ||||             ||||||||||| | || |||||||||||||| |   |  |||||||||||||||||||||||||| | |||||||||||||||    
T  7022154 tcataaaaaaaaaaaaatacataacacccaccaccccatgatttccggcccgacatagattttattggctaacattaatttcggtacaatttcttgataa 7022055  T
Q  243 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatat 309  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  7022054 aatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatatat 7021988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 160 - 320
Target Start/End: Original strand, 24211459 - 24211619
Alignment:
Q  160 tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattat 259  Q
    ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||||||||||    
T  24211459 tacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaagactatttcttgataaaatttaagggtgattat 24211558  T
Q  260 tctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctcg 320  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24211559 tctgccatgccattcttgaaattttcttgataaaatctttcttgatatatagcattgctcg 24211619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 49 - 307
Target Start/End: Original strand, 24844655 - 24844911
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||| |||||||||| ||||||||||| |||||| ||||||||||| ||||||| ||||||||| ||||||||| | ||| | |||||||||||||    
T  24844655 ggaaaatgttagatatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatcactcttagattttaatcttaattattaacctttc 24844754  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | || || |||||||||  ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24844755 ataaaaaaaa--tacataacacccaccaccctatgatttccaatcaggatgagattttattggctaacattaatttcgggacaatttcttgataaaatct 24844852  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||| || ||||||||||||||| ||||||| ||||||| |||||||||||    
T  24844853 aagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatat 24844911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 30834849 - 30835111
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||| |||||||||||||||||||||| |||||| ||| |||||||||||| || ||||| ||||||||||||||||| | |||| | ||| |||    
T  30834849 aggaaaatgatagatatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagatttcagtgttatttttcaactttt 30834948  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
     ||          ||||||||||| | || ||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  30834949 gataaaataaaa-tacataacacccaccaccccatgatttcc--------tgagattttattgactaacattaatttcaggacaatttcttgataaaatc 30835039  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
     |||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||    
T  30835040 aaagggtgattattctgccatgtcattcttg-aattttttcgataaaatctttcttgatatataacattgctc 30835111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 47 - 319
Target Start/End: Original strand, 7017651 - 7017930
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||||||||||   | |||||||| ||||||||||||||||||||||||  |||||    
T  7017651 aaggaaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacattttataataatcatccttagatttcagtctcatttatt--ccttt 7017748  T
Q  147 catnnnnnnnnnn---------tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttctt 237  Q
    |||                   ||||||||||| | || |||||||||||||| |   | |||||||||||||||||||||||||| || ||||||||||    
T  7017749 cataaaaaaataaaaaaataaatacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaattttagtacaatttctt 7017848  T
Q  238 gataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||||||||| ||||||||| ||||||||    
T  7017849 gataaaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcattgctc 7017930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 94 - 319
Target Start/End: Original strand, 27835293 - 27835518
Alignment:
Q  94 aatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtca 193  Q
    ||||| ||| ||||||||||| |||||||||||| |||||||||||||||||| ||          ||||||||||| | ||||||||||||||||   |    
T  27835293 aatgatatgacacaataatcatccttagatttcaatctcatttattaaccttttataaaacaaaaatacataacacccaccatcccatgatttccgtcta 27835392  T
Q  194 agctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 293  Q
     ||||||||||||||||||||||||||||| | |||||||| || ||||||||||||| |||||||| | |||||||||||||||| ||||||| ||||     
T  27835393 ggctgagattttattggctaacattaatttgaagacaattttttaataaaatctaaggatgattattttaccatgtcattcttgaatttttcttaataag 27835492  T
Q  294 atctttcttgatatataacattgctc 319  Q
    |||||| |||||||||| ||||||||    
T  27835493 atctttattgatatatagcattgctc 27835518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 52 - 291
Target Start/End: Original strand, 3890412 - 3890653
Alignment:
Q  52 aaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt--tca 148  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||| |||||| |||||||||| |||||||| | ||| |||||||||||||  |      
T  3890412 aaatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagattttaatcttatttattaaccttaattt 3890511  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||| | | || | ||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  3890512 tataaaaaaaatacataacacccaccaccccatgattttcagccatgatgagattttattggctaacattaatttcgagacaatttcttgataaaatcta 3890611  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgata 291  Q
    | ||||||||||||||||||||||||||||| |||||||||||    
T  3890612 a-ggtgattattctgccatgtcattcttgaatttttcttgata 3890653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 180 - 318
Target Start/End: Original strand, 27782043 - 27782181
Alignment:
Q  180 atgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaa 279  Q
    ||||||||||| ||  || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27782043 atgatttccggccagactaagattttattggctaacattaatttcaagacaatttcttgataaaatctaagggtgattattctgccatgtcattattgaa 27782142  T
Q  280 attttcttgataaaatctttcttgatatataacattgct 318  Q
      |||||||||||||| |||||||||||||| |||||||    
T  27782143 tctttcttgataaaatatttcttgatatatagcattgct 27782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 49 - 221
Target Start/End: Complemental strand, 30055786 - 30055615
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  30055786 ggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagattttagtctcatttattaacctttca 30055687  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaat 221  Q
    |          ||||||||| | | || |||||||||||||| | ||||||||||||||||||||||||||||    
T  30055686 taaaaaaaaaatacataacatccaccaccccatgatttccgg-ccagctgagattttattggctaacattaat 30055615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 49 - 272
Target Start/End: Complemental strand, 10044618 - 10044390
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  10044618 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 10044519  T
Q  149 t-----nnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    |               ||||||||| | | ||  ||||||||||||  ||   |||||||||||||||||||||||||| ||  || |||||||||||||    
T  10044518 taaaaaaaaaaaaaaatacataacaaccaccactccatgatttccgaccagattgagattttattggctaacattaattccaaaactatttcttgataaa 10044419  T
Q  244 atctaagggtgattattctgccatgtcat 272  Q
    || ||||| ||||||||||| ||||||||    
T  10044418 atttaaggatgattattctgtcatgtcat 10044390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 48 - 141
Target Start/End: Original strand, 1503637 - 1503730
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaa 141  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1503637 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaa 1503730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 51 - 149
Target Start/End: Original strand, 24211169 - 24211267
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 149  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  24211169 aaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 24211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 319
Target Start/End: Original strand, 37132472 - 37132723
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  37132472 aaagaaaaatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagatttcagtcttatttattaacct 37132571  T
Q  145 ttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    ||||            |||||||||    || ||||||||||||  |||  |||||||||||||||||||||||||||||| ||                    
T  37132572 ttca-aaaaaaaaaaaacataacac----caccccatgatttccaatcagactgagattttattggctaacattaatttcaaga---------------- 37132650  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
      ||||| |||||||||||||||||||||||| || ||||||||||||||| ||| |||||||||| ||||||||    
T  37132651 --taaggatgattattctgccatgtcattcttaaatttttcttgataaaatattttttgatatatagcattgctc 37132723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 199 - 291
Target Start/End: Original strand, 15972822 - 15972914
Alignment:
Q  199 agattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgata 291  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||    
T  15972822 agattttattggctaacattaaattcagaacaatttcttgataaaatctaagggtgattattctgtcatgtcattcttcaatctttcttgata 15972914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 38017201 - 38017103
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataa-tcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||| | ||| |||||||||||||||||||||||| ||||||    
T  38017201 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatttacctttagatttcagtctcatttattaatctttca 38017103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 38017047 - 38016980
Alignment:
Q  243 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatata 310  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38017047 aatccaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatata 38016980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 1421313 - 1421360
Alignment:
Q  1 ataaaacaactgttagccaaaaaatgtgtgagaagatgtgatgtaaaa 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1421313 ataaaacaactgttagccaaaaaatgtgtgagaagatgtgatgtaaaa 1421360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 3890488 - 3890421
Alignment:
Q  240 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||||    
T  3890488 taaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatat 3890421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 1646026 - 1645953
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||    
T  1646026 aatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatcacccttagattt 1645953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 14128868 - 14128941
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| || |||| |||||||||||||||||| |||||||||||||||||||    
T  14128868 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 14128941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 32064749 - 32064822
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  32064749 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 32064822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 32393862 - 32393935
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||    
T  32393862 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 32393935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 34665386 - 34665459
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  34665386 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 34665459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 35353045 - 35353118
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  35353045 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35353118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 37986116 - 37986043
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| | |||||||| ||||||||||||||| |||||||||||||||||||    
T  37986116 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 37986043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 1503714 - 1503650
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  1503714 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 1503650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 3817914 - 3817967
Alignment:
Q  238 gataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgata 291  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  3817914 gataaaatctaagggtgattattctgtcatgtaattcttgaatttttcttgata 3817967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 6108286 - 6108221
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  6108286 atatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcacccttagattt 6108221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 17841721 - 17841657
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  17841721 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 17841657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 17841911 - 17841838
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||||||||||||    
T  17841911 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 17841838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 20091672 - 20091608
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  20091672 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 20091608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 20091862 - 20091789
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| ||||||||||  ||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  20091862 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 20091789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 26041984 - 26041920
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  26041984 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 26041920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 30834927 - 30834862
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||| |||||||| |||||||||||| ||  ||||||||||||||| ||||||||||    
T  30834927 aaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatat 30834862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 31347843 - 31347770
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| ||||||||||  ||||| | |||||||||| ||||||||||||||| |||||||||||||||||||    
T  31347843 aatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 31347770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 34665575 - 34665639
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  34665575 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 34665639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 37132552 - 37132487
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| || |||||||||| ||||  ||||||||||||||| ||||||||||    
T  37132552 aaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatat 37132487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 40780000 - 40779936
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  40780000 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 40779936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 40780190 - 40780117
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||||||||||||    
T  40780190 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40780117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 42755095 - 42755030
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  42755095 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42755030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Original strand, 35353233 - 35353300
Alignment:
Q  240 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 308  Q
    |||||| ||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||||    
T  35353233 taaaatttaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatata 35353300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 24844734 - 24844659
Alignment:
Q  240 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    ||||||||||| ||||||||| ||||||| ||||||| ||  ||||||||||||||| || ||||||| |||||||    
T  24844734 taaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacatt 24844659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 24844920 - 24844847
Alignment:
Q  52 aaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||| ||||||||||  ||||||| |||||||||| |||||||||||| || |||||||||||||||||||    
T  24844920 aaatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatgaca-aataatcacccttagattt 24844847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 6108104 - 6108040
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  6108104 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 6108040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 7017926 - 7017853
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||| ||| |||||| | |||||||||| ||||||||||||||| |||||||| ||||||||||    
T  7017926 aatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatcatccttagattt 7017853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 7021990 - 7022055
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||| | |||||||||| |||||||| |||||| |||||||||||||||||||    
T  7021990 atatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatcacccttagattt 7022055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 8453838 - 8453911
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || |||||||||||| || |||||||||||||||||||    
T  8453838 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatcacccttagattt 8453911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 10044542 - 10044606
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  10044542 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 10044606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 14129053 - 14129117
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  14129053 aaatctaaaggtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattcttgatat 14129117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 15187564 - 15187637
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||| |||||| |||||| ||||||||||||    
T  15187564 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 15187637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 24211614 - 24211541
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||| ||||||| |||||||||||||| ||||    
T  24211614 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatcacccttaaattt 24211541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 26042177 - 26042104
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||| ||||| |||||||| ||||||| || |||||||||||| || |||||||||||||||||||    
T  26042177 aatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 26042104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 27782178 - 27782105
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| ||||||||||  ||||||| |||||| ||| || |||||||||||| |||||||||||||||||||    
T  27782178 aatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatcacccttagattt 27782105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 31347647 - 31347583
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  ||||||||| ||||| ||||||||||    
T  31347647 aaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 31347583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 37985927 - 37985863
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  37985927 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 37985863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 39772854 - 39772789
Alignment:
Q  61 atatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||||||  ||||||| | |||||||| ||||||||||||||| |||||||||||||||||||    
T  39772854 atatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 39772789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 30835099 - 30835035
Alignment:
Q  61 atatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| ||||||||   ||||||| ||||||||||||||| ||||||||||||| |||||    
T  30835099 atatcaagaaagattttatcgaaaaaattcaagaatgacatggcagaataatcaccctttgattt 30835035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 37132719 - 37132651
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcaccctta 120  Q
    ||||||| ||||||| ||  ||||||| |||||||||||||||||||||||||| |||||||| |||||    
T  37132719 aatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatcatcctta 37132651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 38016983 - 38017047
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatt 124  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| ||||||||||||| ||||    
T  38016983 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttggatt 38017047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 1886621 - 1886672
Alignment:
Q  256 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  1886621 ttattctgccacgtcattcttgaatctttcttgataaaatcattcttgatat 1886672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 30055708 - 30055774
Alignment:
Q  240 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||||| || |||||||||||||||  |||||| |||||||| ||||| ||||    
T  30055708 taaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttaatat 30055774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 319
Target Start/End: Complemental strand, 30055616 - 30055543
Alignment:
Q  239 ataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||| |||||||||||||||||||||       |||||||||| ||||||||||||| |||| |||||| ||||||||    
T  30055616 ataaaatttaagggtgattattctgccat-------ttgaaatttttttgataaaatcttccttggtatatagcattgctc 30055543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 24211243 - 24211179
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||| |  |||||| |||||||| ||||||||||    
T  24211243 aaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatat 24211179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 25581110 - 25581046
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| ||||||||||    
T  25581110 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 25581046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 27835514 - 27835441
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| ||||||| || ||| |||| |||||||||| ||||||||||||| | |||||||| ||||||||||    
T  27835514 aatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatcatccttagattt 27835441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 32064940 - 32065004
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| || |||||||||||| || ||||||| |||||||| ||||||||||    
T  32064940 aaatctaaaggtgattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatat 32065004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 291
Target Start/End: Complemental strand, 41819639 - 41819590
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgata 291  Q
    ||||||||||||||||||| || |||||||||||||||  ||||||||||    
T  41819639 aaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgata 41819590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 41819831 - 41819766
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| |||||   ||||||||||| |||||| |||||||||||||||||||    
T  41819831 atatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatcacccttagattt 41819766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 42754913 - 42754849
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| | ||||||||||||| || ||||||| |||||||| ||||||||||    
T  42754913 aaatctaaaggtgattattgtaccatgtcattcttaaatttttctt-ataaaatcattcttgatat 42754849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 125
Target Start/End: Complemental strand, 25581299 - 25581227
Alignment:
Q  54 atgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||| |||||||||| | |||||  ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatcacctttagattt 25581227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 1645835 - 1645771
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||    |||||| |||||||| ||||||||||    
T  1645835 aaatctaaaggtgattattgtgccatgtcattcttggttctttctt-ataaaatcattcttgatat 1645771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 3817963 - 3817918
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||| ||||| || |||||||||||||||||||    
T  3817963 aagaaaaattcaagaattacatgacagaataatcacccttagattt 3817918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 3890649 - 3890605
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| ||||||||||||||| |||||||| ||||||||||    
T  3890649 aagaaaaattcaagaatgacatggcagaataatca-ccttagattt 3890605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 8454027 - 8454064
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaa 279  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  8454027 aaatctaaaggtgattattgtgccatgtcattcttgaa 8454064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 15187754 - 15187818
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||| |||||||||||| |  |||||| |||||||| ||||||||||    
T  15187754 aaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatat 15187818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 15972910 - 15972865
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||| ||| |||||||||||| || |||||||||||||||||||    
T  15972910 aagaaagattgaagaatgacatgacagaataatcacccttagattt 15972865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 39772673 - 39772609
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| || ||||||||||||| |  |||||| |||||||| ||||||||||    
T  39772673 aaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatat 39772609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 32394051 - 32394117
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatata 310  Q
    |||||||| |||||||||| ||| ||||||||||| |||| || || |||||||| |||||||||||||    
T  32394051 aaatctaaaggtgattattgtgc-atgtcattctt-aaatattttttataaaatcattcttgatatata 32394117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 196; Significance: 1e-106; HSPs: 55)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 47 - 319
Target Start/End: Complemental strand, 33696969 - 33696696
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  33696969 aaggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 33696870  T
Q  147 catnnnnnnnnnnt-acataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaat 245  Q
    |||          | |||||||||| | || |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33696869 cataaaaaaaaaattacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaat 33696770  T
Q  246 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33696769 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 33696696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 47 - 319
Target Start/End: Complemental strand, 28675420 - 28675148
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28675420 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaaccttt 28675321  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          |||||||| || | || |||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28675320 cataaataaaaaatacataacccccaccaccccatgatttccggccaggctgagattttattagctaacattaatttcaggacaatttcttgataaaatc 28675221  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28675220 taagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 28675148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 45 - 319
Target Start/End: Original strand, 17705260 - 17705530
Alignment:
Q  45 aaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  17705260 aaaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacc-ttagatttcagtctcatttattaacct 17705358  T
Q  145 ttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    |||||          ||||||||||| | ||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17705359 ttcataaaaaat---tacataacacccaccatcccatgatttccggccagactgagattttattggctaacattaatttcaggacaatttcttgataaaa 17705455  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  17705456 tctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 17705530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 33695121 - 33695392
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  33695121 ggaaaatgctagatatcaagaatgattttataagaaatatttaagaatgatatgtcacaataatcacctttagatttcagtctcatttattaatctttca 33695220  T
Q  149 tnnnnnnnnnnt-acataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    |          | |||||||||| | || |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33695221 taaaaaaaaaattacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatct 33695320  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33695321 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 33695392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 2309218 - 2309488
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    |||||||||||||||||||  |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2309218 ggaaaatgctagatatcaacgatgattttataagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 2309317  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| |  | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2309318 taaaaaaaaaatacataacacccacaaccccatgatttccggccaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 2309417  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||| ||||||| |||   | ||||||||||||||||||||||||||||||||||    
T  2309418 agggtgattattctgccatgccattcttaaaaaaattttgataaaatctttcttgatatataacattgctc 2309488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 17175816 - 17176086
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  17175816 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatctttca 17175915  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  17175916 taaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcatgattatttcttgataaaatcta 17176015  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  17176016 agggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcattgctc 17176086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 18365369 - 18365638
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||    
T  18365369 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 18365468  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| |  | |||||||||||||| || | ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||    
T  18365469 taaaaaaaaa-tacataacacccactaccccatgatttccggccaggatgagattttattggctaacattaatttcaagactatttcttgataaaattta 18365567  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  18365568 agggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 18365638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 18370633 - 18370902
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||    
T  18370633 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctttca 18370732  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| |  | |||||||||||||| || | ||||||||||||||||||||||||||||| ||| ||||||||||||||| ||    
T  18370733 taaaaaaaaa-tacataacacccactaccccatgatttccggccaggatgagattttattggctaacattaatttcaagactatttcttgataaaattta 18370831  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  18370832 agggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 18370902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 47 - 319
Target Start/End: Original strand, 23290874 - 23291149
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  23290874 aaggaaaatgctagatatcaaaaatgattttataagaaagattcaagaatgatatggcacaataattacctttagatttcagtctcatttattaatcttt 23290973  T
Q  147 catnnnnnnnnnn---tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    |||             ||||||||||| |||| ||||||||||| || || |||||||||||||||| ||||||||||||||| || |||||||||||||    
T  23290974 cataaaaaaaagaaaatacataacacccatcaccccatgatttctggccaggctgagattttattggttaacattaatttcagaactatttcttgataaa 23291073  T
Q  244 atctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  23291074 atctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 23291149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 47 - 308
Target Start/End: Complemental strand, 32702477 - 32702216
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||| |||||||||||||||||||||||| ||||    
T  32702477 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataattacctttagatttcagtctcatttattaatcttt 32702378  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||| ||| | || ||||||||||||||  |  || |||||||||||| ||| |||||||||||||| ||||||||||||||||    
T  32702377 cataaaaaaaagatacataagacccaccaccccatgatttccggctagactcagattttattggttaatattaatttcaggactatttcttgataaaatc 32702278  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 308  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||    
T  32702277 taagggtgattattctgccatatcattcttgaaattttcatgaaaaaatctttcttgatata 32702216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 51 - 320
Target Start/End: Original strand, 6031537 - 6031807
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatn 150  Q
    ||||| || |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||     
T  6031537 aaaatactggatatcaagaatgattttataaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttttata 6031636  T
Q  151 nnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaa 249  Q
              ||||||||||| | || |||||||||||||| || |||| ||||||||||| |||||||||||||| ||| ||||||||||||||| |||    
T  6031637 aaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgggattttattggttaacattaatttcaagactatttcttgataaaatttaa 6031736  T
Q  250 gggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctcg 320  Q
    |||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||| |||||||||    
T  6031737 gggtgattattctgtcatgtcattcttaaaattttattgatgaaatctttcttgatatatagcattgctcg 6031807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 51 - 310
Target Start/End: Original strand, 11548386 - 11548644
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatn 150  Q
    ||||||||||||||||||||||||||   |||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||     
T  11548386 aaaatgctagatatcaagaatgatttatcaagaacgattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--cctttcata 11548483  T
Q  151 nnnnnnnnn--tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
               ||||||||||| | || |||||||||||||| |   | |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  11548484 aaaaagaaaaatacataacaccca-caccccatgatttccggcccgacagagattttattggctaacattaatatcagtacaatttcttgataaaatcta 11548582  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatata 310  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  11548583 agggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatata 11548644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 91 - 319
Target Start/End: Complemental strand, 6127505 - 6127275
Alignment:
Q  91 aagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnn-tacataacaccaatcatcccatgatttccg 189  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||           ||||||||||| | || ||||||||||| |    
T  6127505 aagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctttcatataaaaaaaaatacataacacccaccaccccatgatttctg 6127406  T
Q  190 gtcaagctgagattttattggctaacattaattt-caggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttg 288  Q
    | ||| |||| ||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6127405 gccaaactgatattttattggctaacattaattttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttcttg 6127306  T
Q  289 ataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||| ||||||||    
T  6127305 ataaaatctttcttgatatatagcattgctc 6127275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 118 - 319
Target Start/End: Original strand, 9752110 - 9752309
Alignment:
Q  118 ttagatttcagtctcatttattaacctttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacat 217  Q
    ||||||||||||||||||||||||||||||||          ||||||||||| |||| |||||||||||||| || |||||||||||||||||||||||    
T  9752110 ttagatttcagtctcatttattaacctttcataaaaaaaaa-tacataacacccatcaccccatgatttccggccaggctgagattttattggctaacat 9752208  T
Q  218 taatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgc 317  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||| || | |||||||||||||||||||||    
T  9752209 taatttcaggacaatttcttaataaaatctaagggtgattattctgccatatcattcttgaatttttcttgat-aattttttcttgatatataacattgc 9752307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 160 - 319
Target Start/End: Complemental strand, 25987089 - 25986930
Alignment:
Q  160 tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattat 259  Q
    ||||||||||| | || |||||||||||||| ||  ||||||||||||||| |||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  25987089 tacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatttaagagtgattat 25986990  T
Q  260 tctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  25986989 tttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 25986930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 87 - 316
Target Start/End: Original strand, 8515560 - 8515787
Alignment:
Q  87 atttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnntacataacaccaatcatcccatgattt 186  Q
    |||||| |||||||||| | ||||||||| ||||||||||||||| |||||||||| ||||||          ||||||||| | | || ||||||||||    
T  8515560 atttaaaaatgacatggtagaataatcactcttagatttcagtcttatttattaacatttcataaaaaaaaa-tacataacatccaccaccccatgattt 8515658  T
Q  187 ccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttct 286  Q
    ||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||| ||  | |||    
T  8515659 ccgatcaggctgagattttattggctaacattaatttcgggacaatttcttgataaaatc-aaatgtgattattctgccatgtcattcttaaatctgtct 8515757  T
Q  287 tgataaaatctttcttgatatataacattg 316  Q
    |||||||||||||||||||||||| |||||    
T  8515758 tgataaaatctttcttgatatatagcattg 8515787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 29693718 - 29693615
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt 145  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| |||||||||||||||||| |||||||| ||||    
T  29693718 aaggaaaatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagatttcagtcttatttattatcctt 29693619  T
Q  146 tcat 149  Q
    ||||    
T  29693618 tcat 29693615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 319
Target Start/End: Original strand, 18889683 - 18889761
Alignment:
Q  240 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  18889683 taaaatctaagggttattattctgccatgtcattcttgaaattttcttgat-aaatctttcttgatatatagcattgctc 18889761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 18889481 - 18889539
Alignment:
Q  91 aagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 149  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  18889481 aagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 18889539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 6127279 - 6127352
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  6127279 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 6127352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 23291145 - 23291072
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  23291145 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 23291072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 582522 - 582602
Alignment:
Q  49 ggaaaatgctagatatcaagaatgatttta-taagaaaaatttaagaatgacat-ggcacaataatcacccttagatttca 127  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||| || |||| |||||||||| ||||||||||    
T  582522 ggaaaatgttagatatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatcaccattagatttca 582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 17705526 - 17705453
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||||||||||||    
T  17705526 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttagattt 17705453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 29693639 - 29693704
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||||||| |||||||||||||||||||||| ||  ||||||||||||||| ||||||||||    
T  29693639 aaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatat 29693704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 33695388 - 33695315
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  33695388 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33695315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 33696700 - 33696773
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  33696700 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 33696773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 18365634 - 18365561
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| | |||||||| ||||||||||||||| |||||||||||||| ||||    
T  18365634 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18365561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 18370898 - 18370825
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| | |||||||| ||||||||||||||| |||||||||||||| ||||    
T  18370898 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattt 18370825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 34238883 - 34238948
Alignment:
Q  50 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcac 115  Q
    |||||||||||||||||||||||||||||| |  || ||| |||||||||||| ||||||||||||    
T  34238883 gaaaatgctagatatcaagaatgattttatcaagaagattcaagaatgacatgacacaataatcac 34238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 11548647 - 11548576
Alignment:
Q  55 tgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||| ||||||||||  ||||| | |||||||||| ||||||||||||||| |||||||||||||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 11548576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 582600 - 582526
Alignment:
Q  242 aaatctaagggtgattattctg-ccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||| ||||||||||||| |||| |||||||| || ||||||| |||||||| |||||||||| |||||||    
T  582600 aaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacatt 582526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 11548460 - 11548396
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| ||||||||||||||||||   |||||||| ||||| ||||||||||    
T  11548460 aaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgat-aaatcattcttgatat 11548396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 17176082 - 17176009
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| |  ||||||| |||||||||||| || |||||||||||||||||||    
T  17176082 aatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatcacccttagattt 17176009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 25986934 - 25987007
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| ||||||||| |||| ||||    
T  25986934 aatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatcactcttaaattt 25987007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 28675152 - 28675225
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| |  |||||||||||||||||||    
T  28675152 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatcacccttagattt 28675225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 28675342 - 28675406
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  28675342 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 28675406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 18889757 - 18889685
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||   ||||||| || ||||||||||||||| |||||| ||||||||||||    
T  18889757 aatgctatatatcaagaaagatttatcaagaaaatttcaagaatgacatggcagaataataacccttagattt 18889685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 8515786 - 8515723
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcac 115  Q
    ||||||| |||||||||| |||||||| |||| | ||||||||||||||||||| |||||||||    
T  8515786 aatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatcac 8515723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 2309294 - 2309241
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatc 296  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| ||||||||    
T  2309294 aaatctaagggtgattattgtgccatgtcattcttgaatctttctt-ataaaatc 2309241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 6031611 - 6031547
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||| |||| || || |||||||| ||||||||||    
T  6031611 aaatctaaaggtgattattgtgccatgtcattctt-aaatcttttttataaaatcattcttgatat 6031547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 6031802 - 6031729
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| ||||| || || |||| ||||||||||||||| || |||||||||||||| ||||    
T  6031802 aatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatcacccttaaattt 6031729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 9752278 - 9752233
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||    
T  9752278 aagaaaaattcaagaatgatatggcagaataatcacccttagattt 9752233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 17175892 - 17175828
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| | ||||||||||||||||  |||||| |||||||| ||||||||||    
T  17175892 aaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatat 17175828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 32702399 - 32702463
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| ||| |||||| || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  32702399 aaatctaaaggtaattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 32702463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 33696891 - 33696955
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  33696891 aaatctaaaggtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatat 33696955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 2121004 - 2121059
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaa-atttaagaatgacatgg 103  Q
    |||||||| |||||||||| ||||||||||||| |||| ||| |||||||||||||    
T  2121004 ggaaaatgttagatatcaaaaatgattttataaaaaaagattcaagaatgacatgg 2121059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 215
Target Start/End: Complemental strand, 29693597 - 29693542
Alignment:
Q  160 tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaac 215  Q
    ||||||||| | | || |||||||||||||| || |||||||||||||||||||||    
T  29693597 tacataacatccaccaccccatgatttccggccaggctgagattttattggctaac 29693542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 307
Target Start/End: Complemental strand, 34238948 - 34238894
Alignment:
Q  252 gtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||| || ||||||||||||||| | |||||||||||||| ||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaa-tcttcttgataaaatcattcttgatat 34238894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 286
Target Start/End: Original strand, 18889593 - 18889623
Alignment:
Q  256 ttattctgccatgtcattcttgaaattttct 286  Q
    |||||||||||||||||||||||||||||||    
T  18889593 ttattctgccatgtcattcttgaaattttct 18889623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 2309448 - 2309411
Alignment:
Q  88 tttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  2309448 tttaagaatggcatggcagaataatcacccttagattt 2309411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 17705339 - 17705276
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||||| |||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  17705339 aaatctaagg-tgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 17705276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 18365445 - 18365381
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||| |||||||||||| |  |||||| |||||||| ||||||||||    
T  18365445 aaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatat 18365381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 18370709 - 18370645
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||| |||||||||||| |  |||||| |||||||| ||||||||||    
T  18370709 aaatctaaaggtgattattgtgctatgtcattcttggatctttctt-ataaaatcattcttgatat 18370645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 18889515 - 18889478
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaa 279  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  18889515 aaatctaaaggtgattattgtgccatgtcattcttgaa 18889478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 32702217 - 32702282
Alignment:
Q  61 atatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||| | |  ||||||| |||||||| |||||| |||||||||||||||||||    
T  32702217 atatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatcacccttagattt 32702282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 51 - 319
Target Start/End: Original strand, 4974532 - 4974800
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatn 150  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4974532 aaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcata 4974631  T
Q  151 nnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaag 250  Q
             ||||||||||| | || | |||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4974632 aaaaaaaaatacataacacccaccacctcatgatttccggccaaactgagattttattggctaacattaatttcaggataatttcttgataaaatctaag 4974731  T
Q  251 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4974732 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 4974800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 48 - 320
Target Start/End: Complemental strand, 42612082 - 42611810
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||    
T  42612082 aggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttc 42611983  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | || |||||||||||||||||  |||| ||||||||||||||||||||||||| ||| |||||||||||||||||    
T  42611982 ataaaaaaaaaatacataacacccaccaccccatgatttccggtcagactgaaattttattggctaacattaatttcaagactatttcttgataaaatct 42611883  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctcg 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  42611882 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcg 42611810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 48880721 - 48880992
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||| ||||||||||| |||||    
T  48880721 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacatttagatttcagtttcatttattaatctttc 48880820  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  48880821 ataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 48880920  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48880921 aagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 48880992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 47 - 319
Target Start/End: Complemental strand, 3962250 - 3961979
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  3962250 aaggaaaatgctagatatcaagaatgattttataagaaatatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 3962151  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||||| | || |||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||     
T  3962150 cataaaaaaaaa-tacataacacccaccaccccatgatttccggccaagctgagattttattggctaacattaatttcaagactatttcttgataaaatt 3962052  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  3962051 taagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3961979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 48 - 319
Target Start/End: Complemental strand, 45637982 - 45637712
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    ||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  45637982 aggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 45637883  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||| | | || |||||||||||||| ||  |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  45637882 ataaaaaaaaa-tacataacatccaccaccccatgatttccggccagactgagattttattggctagcattaatttcaggactatttcttgataaaatct 45637784  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45637783 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 45637712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 24395241 - 24394972
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  24395241 ggaaaatgctagatatcaagaatgattttataaaaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 24395142  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || | |||||||||||||||||||||||||||||| || |||| |||||||||||||    
T  24395141 taaaaataaa-tacataacacccaccaccccatgatttccggccaggttgagattttattggctaacattaatttcagaactattttttgataaaatcta 24395043  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    | |||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  24395042 aaggttgttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 24394972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 34483108 - 34482835
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  34483108 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttca 34483009  T
Q  149 tnnnnnnnnnn----tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    |              ||||||||||| | || |||||||||||||| ||  |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34483008 taaaaataaaaaaaatacataacacccacca-cccatgatttccggccagactgagattttattggctaacattaatttcaggactatttcttgataaaa 34482910  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  34482909 tctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcattgctc 34482835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 44 - 319
Target Start/End: Complemental strand, 15329549 - 15329273
Alignment:
Q  44 taaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 143  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||  |||||||||||||||||||||||| |    
T  15329549 taaaaggaaaatgctagatataaagaatgattttataagaaatattcaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatc 15329450  T
Q  144 tttcatnnnnnnnnnntaca-taacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataa 242  Q
    ||||||           | | ||||||  | || |||||||||||||| ||  |||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  15329449 tttcataaaaaataaaaaaaataacactcaccaccccatgatttccggccagtctgagattttattgactaacattaatttcaagactatttcttgataa 15329350  T
Q  243 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15329349 aatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 15329273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 44 - 319
Target Start/End: Original strand, 15577637 - 15577915
Alignment:
Q  44 taaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 143  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||| |||||||||||||||||||||||| |    
T  15577637 taaaaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgtcacaataatcacctttagatttcagtctcatttattaatc 15577736  T
Q  144 tttcatnnnnnnnnnn---tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgat 240  Q
    ||| ||             ||||||||||| | || |||||||||||||| ||  |||||||| ||||||||||||||||||||| |||  |||||||||    
T  15577737 ttttataaaaaaaaaaaaatacataacacccaccaacccatgatttccggccagactgagattatattggctaacattaatttcaagactttttcttgat 15577836  T
Q  241 aaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15577837 aaagtctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 15577915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 25167651 - 25167915
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||      || ||||||    
T  25167651 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctca------aatctttca 25167744  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| |||| |||||||||||||| ||  ||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  25167745 taaaaaaaagatacataacacccatcaccccatgatttccggccagactgagattttattggttaacattaatttcagaactatttcttgataaaatcta 25167844  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||| |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| ||||||||    
T  25167845 aggatgattattctgccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcattgctc 25167915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 49 - 291
Target Start/End: Complemental strand, 30848839 - 30848597
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  30848839 ggaaaatgctagatatcaagaatgcttttataagaaaaattcaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttca 30848740  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| |  |||||||||||||||| ||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  30848739 taaaaaaaagatacataacacccactatcccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatcta 30848640  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgata 291  Q
    ||| |||||||||||||||||||||||| ||||||||||||||    
T  30848639 aggatgattattctgccatgtcattcttaaaattttcttgata 30848597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 48 - 319
Target Start/End: Complemental strand, 42696355 - 42696083
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||| |||||||||| ||||||||||| || ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  42696355 aggaaaatgttagatatcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagatttcagtctcatttattaactttt 42696256  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||| | | || ||| |||||||||| || | ||||||||||||| |||||||||||||||||||||||||||||||||||     
T  42696255 cataaaaaaaaaatacataacatccaccaccccttgatttccggccaggttgagattttattgactaacattaatttcaggacaatttcttgataaaata 42696156  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||| ||||||||||| |||  || || |||||||||||||||||||||||||||||||    
T  42696155 taagggtgattattctgctatgtcattcttaaaaaatttttaataaaatctttcttgatatataacattgctc 42696083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 58 - 315
Target Start/End: Complemental strand, 29737406 - 29737143
Alignment:
Q  58 tagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnn 156  Q
    |||||||||||||||||||||| |||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||           
T  29737406 tagatatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagatttcagtctcatttattaacctttcatagaaaga 29737307  T
Q  157 nnn-----tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagg 251  Q
            |||||||| || |  | ||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  29737306 aaaaaaaatacataactcccactaccccatgatttccggtcaggttgagattttattggctaacattaatttcgggacaatttcttaataaaatctaagg 29737207  T
Q  252 gtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    ||||||||||| ||||||||||||| |||||||||| | |||||||||||||||||||| ||||    
T  29737206 gtgattattctaccatgtcattcttaaaattttcttaaaaaaatctttcttgatatatagcatt 29737143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 50 - 319
Target Start/End: Original strand, 37476876 - 37477145
Alignment:
Q  50 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 149  Q
    |||||||||||||||||||||||||||   |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||  |     
T  37476876 gaaaatgctagatatcaagaatgatttatcaagaaagatttaataatgacatggcacaataatcacccttagatttcagtctcatttattcattttatac 37476975  T
Q  150 nnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaa 249  Q
              ||||||||||| | || |||||||||||||| |   | ||||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  37476976 agaaaaaaaatacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaaatttaa 37477075  T
Q  250 gggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    || |||||||||||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||    
T  37477076 ggatgattattctgccatgtcattcttaaatttttcttgagaaaatctttcttgatatatagcattgctc 37477145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 51 - 319
Target Start/End: Original strand, 20009895 - 20010162
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaa-atttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 149  Q
    |||||| ||||||||| |||||||||||| | |||| ||| |||||||||||| |||||||||||  ||||||||| |||||||||||||||||||| ||    
T  20009895 aaaatgatagatatcatgaatgattttatcaaaaaagattcaagaatgacatgacacaataatcatacttagattttagtctcatttattaacctttaat 20009994  T
Q  150 nnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaa 249  Q
              ||||||||||| || | ||||| |||||||| || | |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20009995 aagaaaaaa-tacataacacccataaccccataatttccggccaggttgagattttattggctaacattaatttcaggacaattttttgataaaatctaa 20010093  T
Q  250 gggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  20010094 gggtgattattctg-tatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 20010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 46 - 319
Target Start/End: Complemental strand, 18037250 - 18036978
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt 145  Q
    |||||||||||||||||||||| ||||||||   |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||  |||     
T  18037250 aaaggaaaatgctagatatcaacaatgatttatcaagaaagatttaagaatgacatggtacaataatcacccttagatttcagtcacatttatt--cctc 18037153  T
Q  146 tcatnnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    ||||           ||||||||||| | || ||||||||||| || |   | ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  18037152 tcataaaaaaaaaaatacataacacccaccaccccatgatttctggcccgacagagattttattggctaacattaatttcagtacaattttttgataaaa 18037053  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    | |||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||| ||||||||    
T  18037052 tttaagggtgattattctgccatgtcattcttaaatttttcttgaaaaaatctttcttgatatatatcattgctc 18036978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 48 - 319
Target Start/End: Complemental strand, 15238655 - 15238382
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||   || ||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||||    
T  15238655 aggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt--cctttc 15238558  T
Q  148 atnnnnnnnnnn----tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    ||              || |||||||| | || |||||||||||||| |   | |||||||||||| |||||||||||||||| ||||||||||||||||    
T  15238557 ataaaaaaaataaaaataaataacacccaccaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataaa 15238458  T
Q  244 atctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||| ||||||||    
T  15238457 atctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 15238382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 163 - 319
Target Start/End: Complemental strand, 35444714 - 35444558
Alignment:
Q  163 ataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattct 262  Q
    |||||||| | ||||||||||||| ||| || |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  35444714 ataacacccaccatcccatgattttcggccaggctgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattct 35444615  T
Q  263 gccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||    
T  35444614 gccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcattgctc 35444558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 36790408 - 36790528
Alignment:
Q  196 ctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaat 295  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| || ||||||||||||||     
T  36790408 ctgagattttattggctaacattaatttcagaacaatttcttgataaaatttaagggtaattattctgccatgtcattcttaaatttttcttgataaaaa 36790507  T
Q  296 ctttcttgatatataacattg 316  Q
    ||||||||||||||| |||||    
T  36790508 ctttcttgatatatagcattg 36790528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 48 - 149
Target Start/End: Complemental strand, 35445668 - 35445567
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||| |||||    
T  35445668 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacacaataatcacctttagatttcagtctcatttattaatctttc 35445569  T
Q  148 at 149  Q
    ||    
T  35445568 at 35445567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 35876514 - 35876414
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  35876514 ggaaaatgctagatatcaagaatgattttataagaaatatctaaaaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 35876415  T
Q  149 t 149  Q
    |    
T  35876414 t 35876414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 177 - 293
Target Start/End: Original strand, 40880715 - 40880831
Alignment:
Q  177 cccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 276  Q
    |||||||||| ||  || ||| |||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  40880715 cccatgattttcgaccaggctaagattttattggctaacattaatttcaggataatttcttcataaaatttaaggatgattattctgccatgtcattctt 40880814  T
Q  277 gaaattttcttgataaa 293  Q
    ||  |||||||||||||    
T  40880815 gagtttttcttgataaa 40880831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 34482839 - 34482912
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  34482839 aatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatcacccttagattt 34482912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 4974796 - 4974723
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  4974796 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 4974723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 42611815 - 42611888
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  42611815 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 42611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 42696277 - 42696350
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    ||||||||||||||||||| | |||||||||||||||| |||| ||||||||||| || ||||||| |||||||    
T  42696277 aaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacatt 42696350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 45637716 - 45637789
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  45637716 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 45637789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 15577911 - 15577841
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttaga 122  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| ||||||||||||||||    
T  15577911 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttaga 15577841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 3961983 - 3962056
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||||||||| ||||    
T  3961983 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttaaattt 3962056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 15329277 - 15329350
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||||||||||||||    
T  15329277 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 15329350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 18036990 - 18037055
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||| | |||||||||||||||||||||||||| |||||||||||||| ||||    
T  18036990 atatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatcacccttaaattt 18037055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 25167727 - 25167663
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  25167727 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 25167663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 25167911 - 25167838
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| ||||||||||    
T  25167911 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcatccttagattt 25167838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 29737143 - 29737216
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||| | |||||||||||||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatcacccttagattt 29737216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 34483032 - 34483104
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  34483032 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 34483104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 36790527 - 36790454
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||||||| |||||| ||||||| ||||    
T  36790527 aatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataattacccttaaattt 36790454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 37477141 - 37477068
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | |||||||||||||||||||||||||| |||||||| ||||| ||||    
T  37477141 aatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatcatccttaaattt 37477068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 48880988 - 48880915
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||||||||||||||    
T  48880988 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 48880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 4974606 - 4974542
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| |||||||||||||||| ||| || || |||||||| ||||||||||    
T  4974606 aaatctaagggtgattattgtgccatgtcattcttg-aatcttttttataaaatcattcttgatat 4974542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 24394976 - 24395049
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||  ||| ||||||||    
T  24394976 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataacaacctttagattt 24395049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 29737338 - 29737403
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| || ||||| |||||| ||  ||||||||||||||| ||||||||||    
T  29737338 aaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatat 29737403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 35444562 - 35444635
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||| ||||| |||||| | ||||||| || ||||||||||||||| |||||||||||||||||||    
T  35444562 aatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 35444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 48880798 - 48880734
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||  ||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  48880798 aaatctaaatgtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 48880734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 40880641 - 40880706
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcac 115  Q
    |||||||||||||||||||||||||||| ||  |||| ||| || ||| ||||||||||||||||||    
T  40880641 ggaaaatgctagatatcaagaatgatttgat-tgaaagattaaaaaataacatggcacaataatcac 40880706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 3962172 - 3962236
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||| |  |||||| |||||||| ||||||||||    
T  3962172 aaatctaaaggtgattattgtgccatgtcattcttggatatttctt-ataaaatcattcttgatat 3962236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 15238414 - 15238459
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||    
T  15238414 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 15238459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 20010158 - 20010086
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| | |||||||| |||||||||||  || |||||||||||||||||||    
T  20010158 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacata-cagaataatcacccttagattt 20010086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 24395165 - 24395229
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||| ||| || || |||||||| ||||||||||    
T  24395165 aaatctaaaggtgattattgtgccatgtcattcttg-aatcttttttataaaatcattcttgatat 24395229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 30848601 - 30848646
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||||    
T  30848601 aagaaaattttaagaatgacatggcagaataatcatccttagattt 30848646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 30848763 - 30848827
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||| ||| |||||||||| |||||||||||||||||| ||||||| |||||| | ||||||||||    
T  30848763 aaatttaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaagcattcttgatat 30848827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 35445591 - 35445655
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| || ||| ||||||||||| ||||||| |||||||| ||||||||||    
T  35445591 aaatctaaaggtgattattgtgtcatatcattcttgaatttttctt-ataaaatcattcttgatat 35445655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 37476951 - 37476887
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| |||||||||||| || ||  ||||||||| ||||| ||||||||||    
T  37476951 aaatctaagggtgattattgtgccatgtcattattaaatctttcttgat-aaatcattcttgatat 37476887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 45637905 - 45637969
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||| ||||    
T  45637905 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatat 45637969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 293
Target Start/End: Original strand, 18037171 - 18037222
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaa 293  Q
    ||||||||||||||||||| | ||||||||||||| ||  ||||||||||||    
T  18037171 aaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaa 18037222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 307
Target Start/End: Complemental strand, 20009972 - 20009905
Alignment:
Q  240 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||||||  |||||||| || |||||||||||||||  ||| ||||||||||| ||| ||||||    
T  20009972 taaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatat 20009905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 15329468 - 15329532
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||  ||||||||| ||||||||||||||||||  |||||| |||||||| ||||| ||||    
T  15329468 aaatctaaaagtgattattgtgccatgtcattcttgaatatttctt-ataaaatcattctttatat 15329532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 15577718 - 15577654
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| || ||||||||||||| |  |||||| |||||||| ||||||||||    
T  15577718 aaatctaaaggtgattattgtgacatgtcattcttggatctttctt-ataaaatcattcttgatat 15577654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 36790271 - 36790336
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 113  Q
    ||||||||||| ||||||| |||| |||||| || ||| ||| |||||||||||| ||||||||||    
T  36790271 ggaaaatgctaaatatcaataatggttttatcaacaaagattcaagaatgacatgacacaataatc 36790336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 42612005 - 42612069
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||  |  |||||| |||||||| ||||||||||    
T  42612005 aaatctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatat 42612069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 47 - 319
Target Start/End: Original strand, 3137207 - 3137479
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  3137207 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 3137306  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||||| |||| |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  3137307 catacaaaaaagatacataacacccatcaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatc 3137406  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  3137407 taagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 3137479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 47 - 319
Target Start/End: Complemental strand, 6042149 - 6041884
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| ||||||||||||||||||||||||  |||    
T  6042149 aaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaattttt 6042050  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||           | |||||| | | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6042049 cataaaa-------aaataacaaccaccaccccatgatttccggtcaggctgagattttattggctaacattaatttcaggactatttcttgataaaatc 6041957  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6041956 taagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 6041884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 51 - 319
Target Start/End: Complemental strand, 33145980 - 33145713
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatn 150  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||     
T  33145980 aaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttattaacctttcata 33145881  T
Q  151 nnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaag 250  Q
             |||||| |||| | || | ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33145880 aaaaaaaaatacataccacccaccacctcataatttccggtcaggctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaag 33145781  T
Q  251 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||| ||||||||    
T  33145780 ggtgattattctgccatgtcattcttaaaatttt-ttaataaaatctttcttgatatatagcattgctc 33145713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 3574321 - 3574592
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||||    
T  3574321 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctctagatttcagtctcatttattaatctttca 3574420  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaattt-caggacaatttcttgataaaatct 247  Q
    |          ||||||||||| | || |||||||||||||| |||||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  3574421 taaaaaaaaaatacataacacccaccaccccatgatttccggccaagctgagattttattggctaacattaattttcaagactatttcttgataaaatct 3574520  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  3574521 aagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3574592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 45 - 319
Target Start/End: Complemental strand, 33114068 - 33113793
Alignment:
Q  45 aaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| ||    
T  33114068 aaaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatct 33113969  T
Q  145 ttcatnnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    |||||           ||||||||||| | || |||||||||||||| ||  |||| ||||||||||||||||||||||||||||| |||||||||||||    
T  33113968 ttcataaaaaaaaaaatacataacacccaccaccccatgatttccggccagactgaaattttattggctaacattaatttcaggactatttcttgataaa 33113869  T
Q  244 atctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  33113868 atctaagggtgattattctgccatgtaattcttgaaattttcttaataaaatctttcttgatatatagcattgctc 33113793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 2754989 - 2754717
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  2754989 ggaaaatgctagatatcaagaatcattttataagaaagatttaagaatgacatggcacaataatcacctttaaatttcagtctcatttattaatctttca 2754890  T
Q  149 tnnnnnnnnnn--tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |            ||||||||||| |  | ||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  2754889 taaaaaaaaaaaatacataacacccactaccccatgatttccggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaaatc 2754790  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  2754789 taaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 2754717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 45 - 319
Target Start/End: Original strand, 22426136 - 22426409
Alignment:
Q  45 aaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  |||||||||||||||||||||||| ||    
T  22426136 aaaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatct 22426235  T
Q  145 ttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    |||||          ||||||||||| | || |||||||||||||| ||  |||| ||||||||||||||||||||||||| ||| ||||||||||||||    
T  22426236 ttcataaaaaaaaa-tacataacacccaccaccccatgatttccggccagactgaaattttattggctaacattaatttcaagactatttcttgataaaa 22426334  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||    
T  22426335 tctaagggtgattattctgccatgtcatttttaaaattttcttgataaaatctttcttaatatataacattgctc 22426409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 47 - 319
Target Start/End: Complemental strand, 3456336 - 3456064
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||| |||||| | |||||||||||||||||||||||| ||||    
T  3456336 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacactaatcatctttagatttcagtctcatttattaatcttt 3456237  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||||| | || |||||||||||||| ||  ||||||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  3456236 cataaaaaaaaaatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaattccaggactatttcttgataaaatc 3456137  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  3456136 taagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 3456064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 47 - 319
Target Start/End: Original strand, 37216846 - 37217118
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||    
T  37216846 aaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattaatcttt 37216945  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||||| | || || ||||||| | |  | |||||||||||||||| |||||||||||||| ||| |||||||||||||||     
T  37216946 cataaaaaaaaaatacataacacccaccaccctatgattttcagcaaggctgagattttattggttaacattaatttcatgactatttcttgataaaatt 37217045  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  37217046 taagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 37217118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 19650695 - 19650965
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  19650695 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 19650794  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaattt-caggacaatttcttgataaaatct 247  Q
    |          ||||||||||| | || |||||||||||||| |||||||||||||||| ||||||||||||||| || |||  ||||||||||||||||    
T  19650795 taaaaaaaaa-tacataacacccaccaccccatgatttccggccaagctgagattttatcggctaacattaattttcaagactgtttcttgataaaatct 19650893  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    || |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  19650894 aatggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttaatatataacattgctc 19650965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 37522323 - 37522053
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||    
T  37522323 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcataataatcacctttagatttcagtctcatttattaatctttca 37522224  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || ||||| |||||||| || | |||||||||||||| |||||||||||||| ||| ||||||| |||||||||     
T  37522223 taaaaaaaagatacataacacccaccaccccataatttccggccaggttgagattttattggttaacattaatttcatgactatttctttataaaatctt 37522124  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||  |||||||    
T  37522123 agggtgattattctgtcatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagtattgctc 37522053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 50 - 319
Target Start/End: Original strand, 8320378 - 8320649
Alignment:
Q  50 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 149  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  8320378 gaaaatgctagatatcaataatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttcat 8320477  T
Q  150 nnnnnnnnnn-tacataacaccaatcatccc-atgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
               ||||||||||| |  | ||| |||||||| || || ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |    
T  8320478 aaaaaaaaaaatacataacacccactacccccatgatttctggccaggctgagattttattggctaacattaatttcaagactatttcttgataaaattt 8320577  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8320578 aagggtgattattttgccatatcattcttaaaattttcttgataaaatctttcttgatatataacattgctc 8320649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 47 - 319
Target Start/End: Complemental strand, 48161178 - 48160905
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||| ||  ||||| |||||| ||||||||||||| ||||||||||||||||||||||||  |||    
T  48161178 aaggaaaatgctagatatcaagaatgattttataagaaatatccaagaacgacatgacacaataatcacctttagatttcagtctcatttattaattttt 48161079  T
Q  147 catnnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaat 245  Q
    |||           ||||||||||| | || |||||| |||||||  | |||||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  48161078 cataaaaaaaaaaatacataacacccaccaccccatggtttccggctaggctgagattttattggctaatattaatttcaagactatttcttgataaaat 48160979  T
Q  246 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  48160978 ctaagggtgattattctgccatatcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 48160905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 46 - 319
Target Start/End: Original strand, 36864824 - 36865092
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttataagaaaa-atttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    |||||||||||||||||||||||||||||||||| | |||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  36864824 aaaggaaaatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaacat 36864923  T
Q  145 ttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    |||||          ||||||||||| | |||||||||||||||||     |||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  36864924 ttcatataaaaaa--tacataacacccaccatcccatgatttccgg----cctgagattctattggctaacattaatttcaggactattttttgataaaa 36865017  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
     ||||||||||||||||| ||||||||||||| |||||||||| |||||||||| ||| ||||||| ||||||||    
T  36865018 cctaagggtgattattctaccatgtcattcttaaaattttcttaataaaatcttccttaatatatagcattgctc 36865092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 49 - 281
Target Start/End: Complemental strand, 3089689 - 3089455
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  3089689 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 3089590  T
Q  149 tnnnnnnnnnn--tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |            |||||| |||| | || |||||||||||||| |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  3089589 taaaaaaaaataatacatagcacccaccaccccatgatttccggccaagctgagattttattggctaacattaatttcaagaatatttcttgataaaatc 3089490  T
Q  247 taagggtgattattctgccatgtcattcttgaaat 281  Q
    |||||||||||||||||||||||||||||| ||||    
T  3089489 taagggtgattattctgccatgtcattcttaaaat 3089455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 49 - 307
Target Start/End: Complemental strand, 47738382 - 47738117
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||| |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  47738382 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagatttcagtctcatttattaacctttc 47738283  T
Q  148 atnnnnnnnnnn------tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgata 241  Q
    ||                ||||||||||| | || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| || |||    
T  47738282 ataaaaaataaaaaaaaatacataacacccaccaccccatgatttctggtcaggctgagattttattggctaacattaatttcaggacaatttttttata 47738183  T
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| ||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 49 - 318
Target Start/End: Original strand, 9796824 - 9797093
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||   |||||| ||| |||||||||||| |||||||||||| |||||||||||||||||||||||  |||||||    
T  9796824 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatgtcacaataatcactcttagatttcagtctcatttatt--cctttca 9796921  T
Q  149 tnnnnnnnnnn--tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |            ||||||| ||| | || |||||||||| ||| |   | |||||||||||||||||||||||||| || |||||||||||||||||||    
T  9796922 taaaaaagaaaaatacataagacccaccaccccatgattttcggcccgacagagattttattggctaacattaatttaagtacaatttcttgataaaatc 9797021  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgct 318  Q
    ||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  9797022 taatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatataacattgct 9797093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 61 - 319
Target Start/End: Complemental strand, 33839794 - 33839531
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnn 159  Q
    ||||||||||||||||||| |||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||              
T  33839794 atatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaatttcagtctcatttattaacctttcataaaaaaagaa 33839695  T
Q  160 ----tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtga 255  Q
        ||||||||||| | || |||||||||| ||| ||   |||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  33839694 aaaatacataacacctaccaccccatgatttacggccagattgagattttattggctaacattaatttcaaaacaatttcttgataaaatctaatggtga 33839595  T
Q  256 ttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||| ||||| |||||| || |||| ||||||||||||||||| ||||||||||||||||    
T  33839594 ttattctgtcatgttattcttaaattttttttgataaaatctttcttaatatataacattgctc 33839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 24343820 - 24343547
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaa-atttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||| |||||||||||||||||||||| | |||| ||| ||||||||||||  |  |||||||||||||||||||||||| |||||||||||||||    
T  24343820 ggaaaatgttagatatcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagatttcagtcttatttattaacctttc 24343721  T
Q  148 atnnnnnnnnnn--tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaat 245  Q
    |             ||||||||||| | || || ||||||| |||||| | |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24343720 aaaaaaaaaaaaaatacataacacccaccacccgatgattttcggtcaggatgagattttattggctaacattaatttcggaacaatttcttgataaaat 24343621  T
Q  246 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||| |||||||||||||||| | | | ||||| |||||||||||||||||||||| ||||||| ||||||||    
T  24343620 ctaagagtgattattctgccatattaattttgaatttttcttgataaaatctttcttaatatatagcattgctc 24343547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 160 - 319
Target Start/End: Complemental strand, 30385170 - 30385011
Alignment:
Q  160 tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattat 259  Q
    ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  30385170 tacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatataagggtgattat 30385071  T
Q  260 tctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||    
T  30385070 tctgccatgtcatttttgaaattttcttgataaaatctttcttgataaatagcattgctc 30385011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 47 - 319
Target Start/End: Original strand, 8361832 - 8362110
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||   |||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||| |  |||    
T  8361832 aaggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattca--ttt 8361929  T
Q  147 catnnnnnnnnnn--------tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttg 238  Q
    |||                  ||||| ||||| | || |||||||||||||| |   | ||||||||||||||||||||||||||||| |||||||||||    
T  8361930 cataaaaaaaaaaaaaaaaaatacatgacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttg 8362029  T
Q  239 ataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |   | |||||||||||||| ||||||||    
T  8362030 ataaaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaattttttttcttgatatatagcattgctc 8362110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 160 - 319
Target Start/End: Complemental strand, 42297513 - 42297353
Alignment:
Q  160 tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattat 259  Q
    ||||||||| | | || ||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  42297513 tacataacatccaccaccccatgatttccggtcaggctgagattttattggctaacattaatttcagaactatttcttgataaaatctaagggtgattat 42297414  T
Q  260 tct-gccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||| | |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  42297413 tctagtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 42297353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 177 - 319
Target Start/End: Original strand, 34482833 - 34482975
Alignment:
Q  177 cccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 276  Q
    |||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||    
T  34482833 cccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaagggtgattattctaccatatcattctt 34482932  T
Q  277 gaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||| |||||||||||||||||||| ||||||||    
T  34482933 gaaattttcttgaaaaaatctttcttgatatatagcattgctc 34482975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 160 - 319
Target Start/End: Complemental strand, 11347427 - 11347268
Alignment:
Q  160 tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattat 259  Q
    ||||||||||| | || |||||||||||  | ||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||    
T  11347427 tacataacacccaccaccccatgatttctagccactctgagattttattggctaacattaatttcaggactatttcctgataaaatctaagggttattat 11347328  T
Q  260 tctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  11347327 tctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 11347268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 48 - 319
Target Start/End: Complemental strand, 41224505 - 41224233
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||   |||||| ||| |||||||||||||||||||||||||||||| |||||| |||||||||||   |||||    
T  41224505 aggaaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttaaatttcaatctcatttattt--ctttc 41224408  T
Q  148 atnnnnnnnnnn---tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    ||             ||||||||||| | || |||||||||||||  | | | ||||||||||| ||||||||||||||||  |||||||||| ||||||    
T  41224407 ataaaaaaaaaaaaatacataacacccaccaccccatgatttccgacccaacagagattttattagctaacattaatttcaatacaatttcttaataaaa 41224308  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |  ||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||| ||||||| || |||||    
T  41224307 ttcaagggtgataattctaccatgtcattcttgaatttttcttgagaaaatctttcttaatatatagcagtgctc 41224233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 91 - 263
Target Start/End: Complemental strand, 42298090 - 42297920
Alignment:
Q  91 aagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnntacataacaccaatcatcccatgatttccgg 190  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||          ||||||||| | | || ||||||||||||||    
T  42298090 aagaatgacatgacacaataaccacccttagatttcagtctcatttattaacctttcataaaaaaaa--tacataacatctaccaccccatgatttccgg 42297993  T
Q  191 tcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctg 263  Q
     ||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42297992 ccagactgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctg 42297920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 47 - 247
Target Start/End: Complemental strand, 40328104 - 40327897
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt 145  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||||||||||||||||| ||||||| |||||    
T  40328104 aaggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttcagtcttatttatttacctt 40328005  T
Q  146 t------catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttga 239  Q
    |       ||          ||||||||||| | || || ||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||    
T  40328004 tgataaaaataaaaataaaatacataacacccaccaccctatgatttccggccaggttgagattttattggctaacattaatttcaggacaatttcttga 40327905  T
Q  240 taaaatct 247  Q
    ||||||||    
T  40327904 taaaatct 40327897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 64 - 291
Target Start/End: Original strand, 41883031 - 41883260
Alignment:
Q  64 tcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnn-ta 161  Q
    |||| ||||||||||| |||||| ||| ||||||||||||| | |||||||| | || ||||||||||| |||||| ||||||| ||           ||    
T  41883031 tcaaaaatgattttatgaagaaagattcaagaatgacatggtaaaataatcatctttggatttcagtcttatttatcaaccttttataaaaaaaaaaata 41883130  T
Q  162 cataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattc 261  Q
    ||||||||| | || |||||||||||  | ||  |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  41883131 cataacacccaccaccccatgatttctagccagtctgagattttattgactaacattaatttcgggacaatttcttgataaaatttaagggtgattattc 41883230  T
Q  262 tgccatgtcattcttgaaattttcttgata 291  Q
    |||||||||||||||||| |||||||||||    
T  41883231 tgccatgtcattcttgaatttttcttgata 41883260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 34482681 - 34482783
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  34482681 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 34482780  T
Q  147 cat 149  Q
    |||    
T  34482781 cat 34482783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 195 - 308
Target Start/End: Complemental strand, 42921267 - 42921154
Alignment:
Q  195 gctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaa 294  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  || |||| | |||||||||||| |||||||||||||||||    
T  42921267 gctgagattttattggctaacattaaattcaggacaatttcttgataaaatctaaaggcaatcattcggtcatgtcattcttaaaattttcttgataaaa 42921168  T
Q  295 tctttcttgatata 308  Q
    ||||||||||||||    
T  42921167 tctttcttgatata 42921154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 30385670 - 30385570
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  30385670 ggaaaatgctaaatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 30385571  T
Q  149 t 149  Q
    |    
T  30385570 t 30385570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 46 - 149
Target Start/End: Complemental strand, 42921399 - 42921295
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    |||| |||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  42921399 aaagaaaaatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaatttcagtctcatttattaacct 42921300  T
Q  145 ttcat 149  Q
    |||||    
T  42921299 ttcat 42921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 49 - 149
Target Start/End: Complemental strand, 26613017 - 26612916
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||| |||||||||| ||||||||||| |||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26613017 ggaaaatgttagatatcaataatgattttattaagaaagattcaagaataacatggcacaataatcacccttagatttcagtctcatttattaacctttc 26612918  T
Q  148 at 149  Q
    ||    
T  26612917 at 26612916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 214 - 319
Target Start/End: Complemental strand, 26612890 - 26612785
Alignment:
Q  214 acattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataaca 313  Q
    |||||||||| ||||| |||| || |||||||||||   || |||||||||||||||||||||||| |||| || ||||||||||| ||||||||||| |    
T  26612890 acattaatttaaggactattttttaataaaatctaaaaatggttattctgccatgtcattcttgaatttttttttataaaatcttttttgatatataata 26612791  T
Q  314 ttgctc 319  Q
    ||||||    
T  26612790 ttgctc 26612785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 50 - 262
Target Start/End: Complemental strand, 46919164 - 46918959
Alignment:
Q  50 gaaaatgctagatatcaagaatgattttataagaaaa-atttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||| |||||||||||||||||||||| | |||| ||| || |||||||||||| ||||||||||  |||||||| |||| ||||||||| || |||    
T  46919164 gaaaatgttagatatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagatttcggtcttatttattaatctatca 46919065  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          || |||||| | | || ||||||||||||     |||  | |||||||| |||||||||||||||  ||||||||||||||||||||||    
T  46919064 t---aaatatatatataacatccaccaccccatgatttcc-----agccaacattttatttgctaacattaatttcgagacaatttcttgataaaatcta 46918973  T
Q  249 agggtgattattct 262  Q
    | ||| ||||||||    
T  46918972 aaggtaattattct 46918959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 3574588 - 3574515
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  3574588 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 3574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 47738305 - 47738378
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||||| |||||||| ||||||||||||||||||  ||||||||||||||| |||||||||| |||||||    
T  47738305 aaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatt 47738378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 33145717 - 33145789
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| | |||| |||||||||||||||||| |||||||||||||||||||    
T  33145717 aatgctatatatcaagaaagattttattaaaaaattttaagaatgacatggcagaataatcacccttagattt 33145789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 2754721 - 2754794
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  2754721 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacctttagattt 2754794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 3456068 - 3456141
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||||||||||||||    
T  3456068 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatcacccttagattt 3456141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 11347272 - 11347345
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||| ||||||||||||    
T  11347272 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataataacccttagattt 11347345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 37217114 - 37217041
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||    
T  37217114 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37217041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 40328025 - 40328090
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  40328025 aaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 40328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 48160909 - 48160982
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||||||||||||||    
T  48160909 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatcacccttagattt 48160982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 33839729 - 33839797
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatata 310  Q
    |||| |||||||||||||| || |||||||||||||||  ||||||||||||||| |||||||||||||    
T  33839729 aaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatata 33839797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 3137285 - 3137221
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  3137285 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 3137221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 3137475 - 3137402
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||||||||||||    
T  3137475 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 3137402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 6041888 - 6041961
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||||||||||||||    
T  6041888 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 6041961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 26612940 - 26613013
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    ||||||||||||||||||| |||||||| |||||||||  |||||| |||||||| || ||||||| |||||||    
T  26612940 aaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatt 26613013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 33113797 - 33113870
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||| |||||||| |||||||||||||||||||    
T  33113797 aatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatcacccttagattt 33113870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 34482759 - 34482695
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  34482759 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 34482695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 36864904 - 36864839
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| || |||||||||||||||  ||| ||||||||||| ||||||||||    
T  36864904 aaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatat 36864839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 46919088 - 46919161
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||  ||||||||||||||||||||||| |||||  ||| ||||||||||| |||||||||| |||||||    
T  46919088 aaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatt 46919161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 42297357 - 42297431
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggc-acaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| | | |||||||||||||||||||    
T  42297357 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgactagaataatcacccttagattt 42297431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 8320637 - 8320572
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||||||||| ||||    
T  8320637 atatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatcacccttaaattt 8320572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 8361910 - 8361846
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| || |||||||||||||||  ||||||||| ||||| ||||||||||    
T  8361910 aaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgat-aaatcattcttgatat 8361846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 8362078 - 8362033
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||    
T  8362078 aagaaaaattcaagaatgacatggcagaataatcacccttagattt 8362033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 9797082 - 9797017
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||| | |||||||||| ||||||||||||||| |||||||||| ||||||||    
T  9797082 atatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattt 9797017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 19650953 - 19650888
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  19650953 atattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcaccattagattt 19650888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 22426397 - 22426332
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||| ||||| |||||||| ||||||| ||||| |||||||||||| |||||||||||||||||||    
T  22426397 atattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatcacccttagattt 22426332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 24343743 - 24343816
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    ||||||||||||||||||  |  |||||||||||||||  ||| ||||||||||| |||||||||| |||||||    
T  24343743 aaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacatt 24343816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 30385594 - 30385658
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  30385594 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 30385658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 33113988 - 33114052
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  33113988 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 33114052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 33145906 - 33145970
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  33145906 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 33145970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 37522247 - 37522311
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  37522247 aaatctaaaggtgattattatgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 37522311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 41224428 - 41224492
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||| |||||||||||||| ||||||||||||||||||  ||||||||| ||||| ||||||||||    
T  41224428 aaatttaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatat 41224492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 3089457 - 3089494
Alignment:
Q  88 tttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||||||||||| |||||||||||||||||||    
T  3089457 tttaagaatgacatggcagaataatcacccttagattt 3089494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 6042071 - 6042135
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||| |  |||||| |||||||| ||||||||||    
T  6042071 aaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatat 6042135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 8320453 - 8320389
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| || |||||||    
T  8320453 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattattgatat 8320389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 9796900 - 9796836
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||| ||||||||| || |||||||||||||||  ||||||||| ||||| ||||||||||    
T  9796900 aaatctaagagtgattattgtgacatgtcattcttgaatctttcttgat-aaatcattcttgatat 9796836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 22426216 - 22426152
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||  ||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  22426216 aaatctaaatgtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 22426152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 30385015 - 30385088
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||  ||||||||| |||||||| ||||||| || || |||||||||||| |||||||||||||| ||||    
T  30385015 aatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatcacccttatattt 30385088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 34482971 - 34482898
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || |||||||| |||| | |||||||||||||||||||    
T  34482971 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatcacccttagattt 34482898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 36865088 - 36865019
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttag 121  Q
    ||||||| |||| ||| | |||||||| ||||||| |||||||||||||||| | |||||||||||||||    
T  36865088 aatgctatatattaaggaagattttattaagaaaattttaagaatgacatggtagaataatcacccttag 36865019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 37216924 - 37216860
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| | ||||||||||||||||  |||||| |||||||| ||||||||||    
T  37216924 aaatctaaaggtgattattgtaccatgtcattcttgaatctttctt-ataaaatcattcttgatat 37216860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 37522065 - 37522130
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||| | ||||||| ||||||||||||||| || |||||||||||| ||||||    
T  37522065 atatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatcaccctaagattt 37522130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 41883256 - 41883211
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||||    
T  41883256 aagaaaaattcaagaatgacatggcagaataatcacccttaaattt 41883211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 42921319 - 42921384
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||| ||||||||||| || ||||||||||||||| ||  ||||||||||||||| ||||| ||||    
T  42921319 aaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatat 42921384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 316
Target Start/End: Complemental strand, 40327912 - 40327878
Alignment:
Q  282 tttcttgataaaatctttcttgatatataacattg 316  Q
    ||||||||||||||||||||||||||||| |||||    
T  40327912 tttcttgataaaatctttcttgatatatagcattg 40327878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 3089613 - 3089677
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||  |  |||||| |||||||| ||||||||||    
T  3089613 aaatctaaaggtgattattgtgccatgtcattcttagatctttctt-ataaaatcattcttgatat 3089677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 19650771 - 19650707
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| || ||||||||||||| |  |||||| |||||||| ||||||||||    
T  19650771 aaatctaaaggtgattattgtgtcatgtcattcttggatctttctt-ataaaatcattcttgatat 19650707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 33839543 - 33839608
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||| ||||| |||||||| || |||||||||||||| ||||| || |||||||||| ||||||||    
T  33839543 atattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatcaccattagattt 33839608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 44893696 - 44893426
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  44893696 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 44893597  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | ||||||||||||| ||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  44893596 taaaaaaaagatacataacacccaccatcccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatcta 44893497  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||    
T  44893496 agggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcattgctc 44893426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 47 - 319
Target Start/End: Original strand, 31078612 - 31078884
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| | |||||||||| ||||||||||||| ||||    
T  31078612 aaggaaaatgctagatatcaagaatgattttataaaaaaaattcaagaatgacatggcacaataatcatctttagatttcaatctcatttattaatcttt 31078711  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||||| |||| |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  31078712 cataaaaaaaagatacataacacccatcaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatc 31078811  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31078812 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 31078884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 45 - 319
Target Start/End: Complemental strand, 47290340 - 47290066
Alignment:
Q  45 aaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||  ||    
T  47290340 aaaaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggtacaataatcacctttagatttcagtctcatttattattct 47290241  T
Q  145 ttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    |||||          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  47290240 ttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaa 47290141  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  47290140 tctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 47290066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 44893007 - 44893279
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  44893007 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 44893106  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | ||||||||||||| ||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  44893107 ataaaaaaaagatacataacacccaccatcccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 44893206  T
Q  248 aagggtgattattctgccatgtcattcttgaaa-ttttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||| |||| |||| |||||||||||| ||||||| ||||||||    
T  44893207 aagggtgattattctgccatgtcattcttgaaattttttttgaaaaaatctttcttaatatatagcattgctc 44893279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 47 - 319
Target Start/End: Complemental strand, 46442116 - 46441844
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  46442116 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 46442017  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||||| | || |||||||||||||| || | |||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  46442016 cataaaaaaaagatacataacacccaccaccccatgatttccggccaggttgagattttattggttaacattaatttcaggactatttcttgataaaatc 46441917  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||    
T  46441916 taagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcattgctc 46441844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 47 - 319
Target Start/End: Complemental strand, 53123303 - 53123030
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||| ||||    
T  53123303 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatcttt 53123204  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||||| | || |||||||||||||| ||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  53123203 catacaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatc 53123104  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttc-ttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||    
T  53123103 taagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcattgctc 53123030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 51 - 319
Target Start/End: Complemental strand, 24128507 - 24128239
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatn 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||||     
T  24128507 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcata 24128408  T
Q  151 nnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaag 250  Q
             ||||||||| | | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  24128407 aaaaaaagatacataacatccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaag 24128308  T
Q  251 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  24128307 gatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 24128239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 21802114 - 21802387
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  21802114 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttc 21802213  T
Q  148 atnnnnnnnnnntacataacaccaatcatc---ccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    ||          ||||||||||| | || |   ||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21802214 ataaaaaaaaa-tacataacacccaccaccaccccatgatttccggccagactgagattttattggctaacattaatttcaggacaatttcttgataaaa 21802312  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  21802313 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctc 21802387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 48 - 318
Target Start/End: Original strand, 7744906 - 7745176
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||| |||||||||||||  ||||    
T  7744906 aggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacattgcacaataatcacctttagatttcaatctcatttattaatatttc 7745005  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | || |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7745006 ataaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatct 7745105  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgct 318  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  7745106 aagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 7745176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 44 - 315
Target Start/End: Complemental strand, 36073624 - 36073354
Alignment:
Q  44 taaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 143  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  36073624 taaatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 36073525  T
Q  144 tttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    ||||||          ||||||||||| | || ||||||||||||||||| |||||||||||||||| |||||||||||||| ||  |||||||||||||    
T  36073524 tttcataaaaaaaga-tacataacacccaccaccccatgatttccggtcaggctgagattttattggttaacattaatttcatgaatatttcttgataaa 36073426  T
Q  244 atctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  36073425 atttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 10442581 - 10442854
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttatt-aaccttt 146  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||| || ||||    
T  10442581 aggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatttaatcttt 10442680  T
Q  147 catnnnnnnnnnnta-cataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaat 245  Q
    ||            | ||||||||| | || |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10442681 caaaaaaaaaaaaaaacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaat 10442780  T
Q  246 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10442781 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 10442854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 47 - 319
Target Start/End: Original strand, 49387680 - 49387953
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    |||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  49387680 aaggaaaatgttagatatcaaggatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatcttt 49387779  T
Q  147 catnnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaat 245  Q
    |||           ||||||||| | | || ||||||||||||||  | |||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  49387780 cataaaaaaaaagatacataacatccaccaccccatgatttccggctaggctgagattttattggttaacattaatttcaggactatttcttgataaaat 49387879  T
Q  246 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49387880 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 49387953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 44 - 319
Target Start/End: Complemental strand, 22199534 - 22199261
Alignment:
Q  44 taaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 143  Q
    |||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  22199534 taaaaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 22199435  T
Q  144 tttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    ||||||          ||||||||||| | || ||||||||||| || || ||||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  22199434 tttcataaaaaaaaa-tacataacacccacca-cccatgatttctggccaggctgagattttattggctaacattagtttcaagactatttcttgataaa 22199337  T
Q  244 atctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22199336 atctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 22199261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 47 - 319
Target Start/End: Complemental strand, 4751719 - 4751446
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  4751719 aaggaaaatgctagatatcaagaataattttataagaaaaatttaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatcttt 4751620  T
Q  147 catnnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaat 245  Q
    |||           ||||||||||| | || |||||||||||||  ||  ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  4751619 cataaaaaagaaaatacataacacccaccaccccatgatttccgaccagactgagattttattggttaacattaatttcaggactatttcttgataaaat 4751520  T
Q  246 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  4751519 ctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 4751446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 47 - 320
Target Start/End: Complemental strand, 36073223 - 36072946
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  36073223 aaggaaaatgctagatatcaaaaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatcttt 36073124  T
Q  147 catnnnnnnnnnn----tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataa 242  Q
    |||              ||||||||||| | || |||||||||||||| ||  ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  36073123 cataaaaaaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataa 36073024  T
Q  243 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctcg 320  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36073023 aatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctcg 36072946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 51 - 291
Target Start/End: Complemental strand, 9089138 - 9088898
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatn 150  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||     
T  9089138 aaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatctttcata 9089039  T
Q  151 nnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaag 250  Q
             ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  9089038 caaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaag 9088939  T
Q  251 ggtgattattctgccatgtcattcttgaaattttcttgata 291  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9088938 ggtgattattctgccatgtcattcttgaaattttcttgata 9088898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 50156373 - 50156643
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| || |||||||||| |||||||||||||||||||||||| |||||    
T  50156373 aggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatgacataataatcacc-ttagatttcagtctcatttattaatctttc 50156471  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||| | ||| |||||||||||||||||    
T  50156472 ataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaattttatgactatttcttgataaaatct 50156571  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||| ||||||||    
T  50156572 aagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttaatatatagcattgctc 50156643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 59 - 319
Target Start/End: Original strand, 23964269 - 23964530
Alignment:
Q  59 agatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnn 158  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| | |||||||||| ||||||||||||| |||||||             
T  23964269 agatatcaagaatgattttataagaaagatttaagaatgacatggcataataatcatctttagatttcaatctcatttattaatctttcataaaaaaaaa 23964368  T
Q  159 n-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgatt 257  Q
      ||||||||||| | || | ||||||||||||||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  23964369 aatacataacacccaccaccgcatgatttccggtcaggctgagattttattgactaacattaatttcaagactatttcttgataaaatctaagggtgatt 23964468  T
Q  258 attctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  23964469 attctgccatgtcattcttaaaatttttttgataaaatctttcttgatatataacattgctc 23964530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 47 - 319
Target Start/End: Complemental strand, 2625109 - 2624837
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    |||||||||| |||||||||||||||||||||||||||| ||| || |||||||| |||||||||||||| |||||||||||||||||||||||| ||||    
T  2625109 aaggaaaatgttagatatcaagaatgattttataagaaagattcaaaaatgacatagcacaataatcacctttagatttcagtctcatttattaatcttt 2625010  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||||| | ||  ||||||||||||| ||  ||||||||||||||  |||||||||||||| ||  ||||||||||||||||    
T  2625009 cataaaaaaaaaatacataacacccaccactccatgatttccggccagactgagattttattgattaacattaatttcatgattatttcttgataaaatc 2624910  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2624909 taagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 2624837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 51 - 287
Target Start/End: Complemental strand, 17655699 - 17655462
Alignment:
Q  51 aaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 149  Q
    |||||||||||||| |||||||||||||| |||||| |||||||||||||||| || |||||| ||| ||||||||||||||||||||||||||||||||    
T  17655699 aaaatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagatttcagtctcatttattaacctttcat 17655600  T
Q  150 nnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaa 249  Q
               | |||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17655599 aaaaaaaatacatataacacccatcatcccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaa 17655500  T
Q  250 gggtgattattctgccatgtcattcttgaaattttctt 287  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17655499 gggtgattattctgccatgtcattcttgaaattttctt 17655462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 33530479 - 33530753
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||| ||| ||  |||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||    
T  33530479 ggaaaatgctagatatcaagaatgattttataaaaaagatccaagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttca 33530578  T
Q  149 tnnnnnnnnnnta-----cataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    |           |     ||||||||| | || |||||||||||||| || ||||| ||||||||||||||||||| ||||| ||| |||||||||||||    
T  33530579 taaaaaaaataaaaaaaacataacacccacca-cccatgatttccggccaggctgaaattttattggctaacattagtttcaagactatttcttgataaa 33530677  T
Q  244 atctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  33530678 atctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcattgctc 33530753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 46 - 319
Target Start/End: Complemental strand, 24392947 - 24392667
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt 145  Q
    |||| ||||||||||||||||||||||||||   |||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||  ||||    
T  24392947 aaagaaaaatgctagatatcaagaatgatttatcaagaaatatttaagaatgacatagcacaataatcatccttagatttcagtctcatttatt--cctt 24392850  T
Q  146 tcatnnnnnnnnnn---------tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttct 236  Q
    ||||                   ||||||||||| |||| |||||||||||||| |   | |||||||||||| |||||||||||||||| |||||||||    
T  24392849 tcataaaaaaaataaaaaaaaaatacataacacccatcaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttct 24392750  T
Q  237 tgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  24392749 tgataaaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctc 24392667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 37934735 - 37935006
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||| ||||||| | || ||||||||| |||||| ||| || ||||| ||| |||||||||||||||||||||||| ||||||||||||||||||    
T  37934735 aggaaaatgttagatattatgactgattttattaagaaagattcaataatgatatgacacaataatcacccttagatttcaatctcatttattaaccttt 37934834  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||| | | |||||||| |||||||  ||  ||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  37934835 cataaaaaaaaa-tacataacaaccaccatcccataatttccgaccagactgagattttattggttaacattaatttcaggataatttcttgataaaatc 37934933  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||| |||||| ||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||    
T  37934934 taagggtgagtattctaccatgtcattcttgacatttttttgataaaatcttttttgatatatagcattgctc 37935006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 49 - 310
Target Start/End: Complemental strand, 42671939 - 42671678
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||| |||||||||||||||||||||| |||||| ||| |||||||||||| || ||||||||  ||||||||| |||||||||| ||||||||||    
T  42671939 ggaaaatgttagatatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatcattcttagatttgagtctcatttgttaacctttc 42671840  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
     |           |||||||||  |||| ||||| |||||||| |||  |||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  42671839 gtaaaaaaaaaa-acataacactcatcaccccataatttccggccaaattgagattttattggttaacattaattttaggacaatttcttgataaaatct 42671741  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatata 310  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||||| ||||||||||    
T  42671740 aagggtgattattctgccatgtcattcttaaattttttttgataaaatctttattgatatata 42671678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 80 - 291
Target Start/End: Complemental strand, 30563448 - 30563237
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnntacataacaccaatcatccc 179  Q
    |||||| ||| |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||          ||||||||||| | || |||    
T  30563448 aagaaagattcaagaatgacatgacacaataatcacacttagatttcagtcttatttattaacctttcataaaaaaaaaatacataacacccaccacccc 30563349  T
Q  180 atgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaa 279  Q
    ||||||||||| || ||||||||||||||||| |||||||||| ||||| |||||||||||||||||||| | ||| ||||||||| ||||||| |||||    
T  30563348 atgatttccggccaggctgagattttattggccaacattaattgcaggataatttcttgataaaatctaaagatgactattctgccgtgtcattgttgaa 30563249  T
Q  280 attttcttgata 291  Q
      ||||||||||    
T  30563248 tctttcttgata 30563237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 46 - 273
Target Start/End: Complemental strand, 37219905 - 37219671
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| |||||||||||| ||| ||||||||||||    
T  37219905 aaaggaaaatgttagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagatttcaatcttatttattaacct 37219806  T
Q  145 ttcat------nnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttg 238  Q
    |||||                ||||||||| | |||| || ||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||||    
T  37219805 ttcataaaaaataaaaaaaaatacataacatccatcacccaatgatttccggccagactgagattttattgactaacattaatttcaggacaatttcttg 37219706  T
Q  239 ataaaatctaagggtgattattctgccatgtcatt 273  Q
    ||||||| |||| ||||||||| | ||||||||||    
T  37219705 ataaaatttaagagtgattattttaccatgtcatt 37219671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 177 - 306
Target Start/End: Original strand, 36073666 - 36073795
Alignment:
Q  177 cccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 276  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||  ||||||||| || ||||||||||||    
T  36073666 cccatgatttccggccaaactgagattttattggctaatattaattttaggacaatttcttcataaaatctaaaagtgattattttgtcatgtcattctt 36073765  T
Q  277 gaaattttcttgataaaatctttcttgata 306  Q
     ||  |||||| ||||||||||||||||||    
T  36073766 aaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 47 - 275
Target Start/End: Original strand, 11314044 - 11314255
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt 145  Q
    ||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||| |||||||||||||||||||||  ||||| |||||||||||||    
T  11314044 aaggaaaatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagattatagtcttatttattaacctt 11314143  T
Q  146 tcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaat 245  Q
    | |           ||||||||||       |||||||||| ||| |||||       ||||||||||||||||||||||| |||||||||||||| |||    
T  11314144 tta----aaaaaagtacataacac-------cccatgattttcggccaagc-------ttattggctaacattaatttcagaacaatttcttgatataat 11314225  T
Q  246 ctaagggtgattattctgccatgtcattct 275  Q
    |||||| ||||||||||| |||||||||||    
T  11314226 ctaaggatgattattctgtcatgtcattct 11314255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 302
Target Start/End: Complemental strand, 44744698 - 44744452
Alignment:
Q  50 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 149  Q
    ||||||| |||||||||| ||||||||||| |   | ||| |||||||||||| | ||||||| | |||||||||||||||| |||||||||||| |       
T  44744698 gaaaatgttagatatcaaaaatgattttatca---agattcaagaatgacatgactcaataattatccttagatttcagtcttatttattaacctata-- 44744604  T
Q  150 nnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaa 249  Q
              ||||||||||| | || || ||||||||||| ||  |||| ||||||| | ||||||| |||||||||||||||| |||||||||| |||    
T  44744603 caaaaaaaaatacataacacccaccaccctatgatttccggccagactga-attttatcgactaacatcaatttcaggacaattttttgataaaatttaa 44744505  T
Q  250 gggtgattattctgccatgtcattcttgaaattttcttgataaaatctttctt 302  Q
    ||||||||||||| |||||||||| || ||  |||||| ||||||||||||||    
T  44744504 gggtgattattctaccatgtcatttttaaatatttcttaataaaatctttctt 44744452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 7745173 - 7745100
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  7745173 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 7745100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 33530749 - 33530676
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  33530749 aatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 33530676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 37219825 - 37219898
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||||| |||||||||||||||||||||||| ||  ||||||||||||||| |||||||||| |||||||    
T  37219825 aaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatt 37219898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 25063369 - 25063443
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttaga 122  Q
    ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||| | ||||||||| ||||||    
T  25063369 ggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatcactcttaga 25063443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 10442850 - 10442777
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  10442850 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 10442777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 31078880 - 31078807
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  31078880 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31078807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 141
Target Start/End: Original strand, 36073256 - 36073349
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaa 141  Q
    |||||||||||||||  || ||||||||||| |||||| |||||||||||| ||| || |||||| || ||||||||||||||| |||||||||    
T  36073256 ggaaaatgctagatactaaaaatgattttatcaagaaagatttaagaatgatatgccagaataattactcttagatttcagtcttatttattaa 36073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 49387949 - 49387876
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  49387949 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 49387876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 55 - 125
Target Start/End: Original strand, 42671675 - 42671746
Alignment:
Q  55 tgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||| ||||||| || |||||||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatcacccttagattt 42671746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 25063443 - 25063381
Alignment:
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||| ||||||||||| ||||||||||||||||  ||||||||||||||| ||||||||||    
T  25063443 tctaagagtgattattctaccatgtcattcttgaatctttcttgataaaatcattcttgatat 25063381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 2624841 - 2624914
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||| |||||| |||||||||||||||||||    
T  2624841 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatcacccttagattt 2624914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 21802383 - 21802310
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| ||||||||||  ||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  21802383 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 21802310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 22199265 - 22199338
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||| ||||||||||    
T  22199265 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcagccttagattt 22199338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 23964518 - 23964453
Alignment:
Q  61 atatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| | |||||||| ||||||||||||||| |||||||||||||||||||    
T  23964518 atatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattt 23964453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 24392671 - 24392744
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | |||||||||| ||||||||||||||| |||||||||||||| ||||    
T  24392671 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcacccttaaattt 24392744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 36072951 - 36073024
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| ||||| |||||||||||||    
T  36072951 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataaccacccttagattt 36073024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 36073543 - 36073607
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  36073543 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 36073607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 42671862 - 42671935
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||||  |||||||| || |||||||||||||||  ||||||||||||||| |||||||||| |||||||    
T  42671862 aaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatt 42671935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 44893430 - 44893503
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | | |||||||| ||||||||||||||| |||||||||||||||||||    
T  44893430 aatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 46441848 - 46441921
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||||||||||||    
T  46441848 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatcacccttagattt 46441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 46442038 - 46442102
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  46442038 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 46442102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 47290070 - 47290143
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||||||||||||    
T  47290070 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 49387758 - 49387686
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| | |||||||| |||||||    
T  49387758 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcatccttgatatctaacatt 49387686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 50156639 - 50156566
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||| ||||| |||||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  50156639 aatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 50156566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 11314122 - 11314058
Alignment:
Q  243 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||||||||||||| || ||||||||||||| |  ||||||||||||||| ||||||||||    
T  11314122 aatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatat 11314058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 53123034 - 53123108
Alignment:
Q  53 aatgctagatatcaagaatgattttat--aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| |  ||||||| || ||||||||||||||| |||||||||||||||||||    
T  53123034 aatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatcacccttagattt 53123108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 4751450 - 4751523
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |  ||||||||||||||| ||||| |||||||||||||    
T  4751450 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 4751523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 7744983 - 7744911
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||| |||||||||| ||| ||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  7744983 aaatctaaaggtgattattgtgcaatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 7744911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 9089064 - 9089128
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  9089064 aaatctaaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 9089128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 10442658 - 10442594
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  10442658 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 10442594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 21802191 - 21802127
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  21802191 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 21802127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 24128243 - 24128316
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||| ||||||||||    
T  24128243 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 24128316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 36073354 - 36073427
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||||||| ||||    
T  36073354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttaaattt 36073427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 44893084 - 44893020
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  44893084 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 44893020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 44893620 - 44893684
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  44893620 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 44893684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 47290260 - 47290324
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| | |||||||||||||||| ||||||| |||||||| ||||||||||    
T  47290260 aaatctaaaggtgattattgtaccatgtcattcttgaatttttctt-ataaaatcattcttgatat 47290324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 50156449 - 50156378
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||||| |||||||| || ||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  50156449 aaatctaagg-tgattattatgtcatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacatt 50156378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 53123225 - 53123289
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  53123225 aaatctaaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 53123289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 125
Target Start/End: Original strand, 17655461 - 17655507
Alignment:
Q  79 taagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||| || ||||||||||||||| |||||||||||||||||||    
T  17655461 taagaaaatttcaagaatgacatggcagaataatcacccttagattt 17655507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 44893275 - 44893201
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||| ||||| |||||| | || |||||||| ||||||||||||||| |||||||||||||||||||    
T  44893275 aatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 44893201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 9088902 - 9088947
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| || ||||||||||||||| |||||||||||||||||||    
T  9088902 aagaaaatttcaagaatgacatggcagaataatcacccttagattt 9088947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 22199453 - 22199517
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||| |  |||||| |||||||| ||||||||||    
T  22199453 aaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatat 22199517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 31078690 - 31078626
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| | |||||||| |||||||||||||||| |||||| || |||||||| ||||||||||    
T  31078690 aaatctaaagatgattattgtgccatgtcattcttg-aattttttttataaaatcattcttgatat 31078626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 36073145 - 36073209
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||| ||||| |||||||||||||||||| ||||||| |||||||| || |||||||    
T  36073145 aaatctaaaggtggttattgtgccatgtcattcttgaatttttctt-ataaaatcatttttgatat 36073209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 36073795 - 36073731
Alignment:
Q  62 tatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||||| |||||||| |||||| |||||||||||||||| || |||||||||  ||||||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatcacttttagattt 36073731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 172 - 247
Target Start/End: Complemental strand, 9111412 - 9111337
Alignment:
Q  172 atcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    |||| |||||||||| ||| || |  || |||||||||| |||| ||||||||  |||||||||||||||||||||    
T  9111412 atcaccccatgattttcggccaggtagaaattttattggttaactttaatttcgagacaatttcttgataaaatct 9111337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 4751641 - 4751705
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||| ||||| ||||||||||||||| || ||||||| |||||||  ||||||||||    
T  4751641 aaatctaaaggtggttattgtgccatgtcattcttaaatttttctt-ataaaattattcttgatat 4751705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 17655624 - 17655689
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| ||| |||||| || |||||||||||| ||  ||||||||||||||| ||||| ||||    
T  17655624 aaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatat 17655689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 23964335 - 23964271
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| | |||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  23964335 aaatctaaagatgattattatgccatgtcattcttaaatctttctt-ataaaatcattcttgatat 23964271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 24128433 - 24128497
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| ||| |||||| || |||||||||||| || ||||||| |||||||| ||||||||||    
T  24128433 aaatctaaaggtaattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatat 24128497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 24392868 - 24392932
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||||| |||||||| ||| ||||||||||| ||  ||||||||| ||||| ||||||||||    
T  24392868 aaatctaaggatgattattgtgctatgtcattcttaaatatttcttgat-aaatcattcttgatat 24392932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 30563403 - 30563452
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgata 291  Q
    ||||||||| ||||||||| || |||||||||||||||  ||||||||||    
T  30563403 aaatctaagtgtgattattgtgtcatgtcattcttgaatctttcttgata 30563452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 33530555 - 33530491
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||  || || || |||||||| ||||||||||    
T  33530555 aaatctaaaggtgattattgtgccatgtcattcttg-gatcttttttataaaatcattcttgatat 33530491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 37935002 - 37934929
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| ||||||| || |||||||| | |||||| | ||||||||||||| | |||| ||||||||||||||    
T  37935002 aatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaatactcacccttagattt 37934929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 125
Target Start/End: Original strand, 44744452 - 44744512
Alignment:
Q  66 aagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||| |||||||| |||||| |||||| |||||||||| | |||||||||||||| ||||    
T  44744452 aagaaagattttattaagaaatatttaaaaatgacatggtagaataatcacccttaaattt 44744512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 23267857 - 23268127
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  23267857 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 23267956  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| ||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  23267957 taaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatcta 23268056  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  23268057 agggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 23268127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 9293370 - 9293641
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  9293370 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacccttagatttcagtctcatttattaatctttca 9293469  T
Q  149 tnnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    |           ||||||||||| | || |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9293470 taaaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 9293569  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  9293570 aagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcattgctc 9293641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 33380477 - 33380207
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  33380477 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 33380378  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  33380377 ttaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatcta 33380278  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  33380277 agggtgattattcagccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33380207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 35161029 - 35160757
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  35161029 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 35160930  T
Q  149 tnnnnnnnnnn--tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |            ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  35160929 taaaaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatc 35160830  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  35160829 taagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 35160757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 49 - 318
Target Start/End: Complemental strand, 10662158 - 10661888
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  10662158 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 10662059  T
Q  149 tnnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    |           ||||||||||| | || || ||||||||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  10662058 taaaaaaaaagatacataacacccaccaccctatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 10661959  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgct 318  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  10661958 aagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgct 10661888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 44 - 319
Target Start/End: Original strand, 7475298 - 7475573
Alignment:
Q  44 taaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 143  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| || |||||||||| |||||||||||||||||||||||| |    
T  7475298 taaatggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgatatgacataataatcacctttagatttcagtctcatttattaatc 7475397  T
Q  144 tttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    ||||||          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  7475398 tttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 7475497  T
Q  244 atctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  7475498 atctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 7475573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 52 - 316
Target Start/End: Original strand, 31174633 - 31174896
Alignment:
Q  52 aaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnn 151  Q
    |||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||| | || |||||||||| ||||||||||||| |||||||      
T  31174633 aaatgctagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataaactcctttagatttcaatctcatttattaatctttcataa 31174732  T
Q  152 nnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagg 251  Q
            ||||||||||| | || |||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31174733 aaaaaaa-tacataacacccaccaccccatgatttccggtcagactgagattttattggctaacattaatttcaggactatttcttgataaaatctaagg 31174831  T
Q  252 gtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattg 316  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  31174832 gtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatatataacattg 31174896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 46 - 319
Target Start/End: Complemental strand, 13355121 - 13354846
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt 145  Q
    |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||  |||||||||||||||||||||||| |||    
T  13355121 aaaggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacttttagatttcagtctcatttattaatctt 13355022  T
Q  146 tcatnnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagct-gagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    ||||           ||||||||||| | ||  ||||||||||||| || ||| |||||||||||||||||||||||||||| ||| |||||||||||||    
T  13355021 tcataaaaaaaaaaatacataacacccaccactccatgatttccggccaggctagagattttattggctaacattaatttcaagactatttcttgataaa 13354922  T
Q  244 atctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13354921 atctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 13354846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 53 - 291
Target Start/End: Complemental strand, 3989342 - 3989104
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnn 152  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||||       
T  3989342 aatgctagatatcaagaatgattttataagaaagatccaagaatgacatgacacaataataacctttagatttcagtctcatttattaatctttcataaa 3989243  T
Q  153 nnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaaggg 252  Q
           ||||||||||| | || |||||||||||||| ||  |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  3989242 aaaaaaatacataacacccaccaccccatgatttccggccagactgagattttattggctaacattaatttcaagactatttcttgataaaatctaaggg 3989143  T
Q  253 tgattattctgccatgtcattcttgaaattttcttgata 291  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  3989142 tgattattctgccatgtcattcttaaaattttcttgata 3989104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 91 - 319
Target Start/End: Complemental strand, 21936310 - 21936081
Alignment:
Q  91 aagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnntacataacaccaatcatcccatgatttccgg 190  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||| |||||||          ||||||||||| | || ||||||||||||||    
T  21936310 aagaatgacatggcacaataatcacctttagatttcagtttcatttattaatctttcataaaaaaaaaatacataacacccaccaccccatgatttccgg 21936211  T
Q  191 tcaagct-gagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttga 289  Q
     || ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21936210 ccaggctagagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttga 21936111  T
Q  290 taaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||| ||||||||    
T  21936110 taaaatctttcttgatatatagcattgctc 21936081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 48 - 319
Target Start/End: Complemental strand, 43331183 - 43330912
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||   |||||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||  ||| ||    
T  43331183 aggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggtacaataatcacctttagatttcagtctcatttatt--cctctc 43331086  T
Q  148 atnnnnnnnnnn--tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaat 245  Q
    ||            ||||||||||| | || |||||||||||||| |   | || |||||||||||||||||||||||||| ||||||||||||||||||    
T  43331085 ataaaaaaaaaaaatacataacacccaccaccccatgatttccggcccgacagaaattttattggctaacattaatttcagtacaatttcttgataaaat 43330986  T
Q  246 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||| ||||||||    
T  43330985 ctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcattgctc 43330912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 9723677 - 9723405
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||| ||||||||||||||||||| || |||||| |||||||||||||||| || |||||||||| |||||||||||||| ||||||| || ||||    
T  9723677 ggaaaatgttagatatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagatttcagtcttatttattcacttttc 9723578  T
Q  148 atnnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    ||           ||||||||||| | || ||||||||||||||| | |||||||||||||| ||||||||||||||| ||||||||||||||||||||     
T  9723577 ataaaaaaaaaaatacataacacccaccaccccatgatttccggtgaggctgagattttattagctaacattaatttcgggacaatttcttgataaaatt 9723478  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||| |||||||||||| ||  |||||| |||||||||||||| ||||||| ||||||||    
T  9723477 taagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcattgctc 9723405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 91 - 319
Target Start/End: Original strand, 14941201 - 14941431
Alignment:
Q  91 aagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnn---tacataacaccaatcatcccatgatttc 187  Q
    |||||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||             ||||||||||| | || | |||||||||    
T  14941201 aagaatgacatgacacaataatcatccttagatttcaatcttatttattaacctttcataaaataaaaaaaatacataacacccaccacctcatgatttc 14941300  T
Q  188 cggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttctt 287  Q
     || || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  14941301 tggccaggctgagattt-attggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaatctttctt 14941399  T
Q  288 gataaaatctttcttgatatataacattgctc 319  Q
     |||||||||||||||||||||| ||||||||    
T  14941400 aataaaatctttcttgatatatagcattgctc 14941431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 51 - 322
Target Start/End: Original strand, 21393483 - 21393756
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatn 150  Q
    ||||||||||||||||||||||||||   ||||||| || |||||||||||| ||||||||||||||||| ||||||||||||||||||  ||||||||     
T  21393483 aaaatgctagatatcaagaatgatttatcaagaaaa-ttcaagaatgacatgacacaataatcacccttaaatttcagtctcatttatt--cctttcata 21393579  T
Q  151 nnnnnnnnn-----tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaat 245  Q
                  ||||||||||| | || |||||||||||||| |   |  |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  21393580 aaaaaaataaaaaatacataacacccaccaccccatgatttccggcccgacatagattttattggttaacattaatttcagtacaatttcttgataaaat 21393679  T
Q  246 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctcgat 322  Q
    ||||||||||||||||| ||||||||||||| || ||||||||| ||||| |||||||||||||| |||||| ||||    
T  21393680 ctaagggtgattattctaccatgtcattcttaaatttttcttgagaaaatttttcttgatatatagcattgcccgat 21393756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 160 - 319
Target Start/End: Complemental strand, 27847791 - 27847632
Alignment:
Q  160 tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattat 259  Q
    ||||||||||| | || ||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||||||||    
T  27847791 tacataacacccaccaccccatgatttctggtcaggctgagattttattgactaacattaatttcaggacaattttttgataaaatctaacggtgattat 27847692  T
Q  260 tctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||| |||||||||||||||  |||||| |||||||||||||| ||||| | ||||||||    
T  27847691 tctgtcatgtcattcttgaatctttcttaataaaatctttctttatatacagcattgctc 27847632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 177 - 314
Target Start/End: Complemental strand, 22591624 - 22591487
Alignment:
Q  177 cccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 276  Q
    |||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||| ||||||||    
T  22591624 cccatgatttcctgctaggctgagattttattggctaacattaatttcaggacaatttcttaataaaatttaagggggattattctgccatatcattctt 22591525  T
Q  277 gaaattttcttgataaaatctttcttgatatataacat 314  Q
    ||| |||| || ||||||||||||||||||| ||||||    
T  22591524 gaattttttttaataaaatctttcttgatatttaacat 22591487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 80 - 309
Target Start/End: Original strand, 16767288 - 16767527
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnn----------tacataacac 169  Q
    |||||| ||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||                    ||||||||||    
T  16767288 aagaaagattcaagaatgacatgacacaataatcactcttagatttcagtctcatttattaacctttcataaaataaaataaaataaaaatacataacac 16767387  T
Q  170 caatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgt 269  Q
    | | || || ||||||||||| ||  ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| || | |    
T  16767388 ccaccaccctatgatttccggccagactgagattttattggctaacattaatttcaggataatttcttgataaaatttaagagtgattattctaccgtat 16767487  T
Q  270 cattcttgaaattttcttgataaaatctttcttgatatat 309  Q
     |||||| |  |||| || ||||||||| |||||||||||    
T  16767488 tattcttaattttttttttataaaatctctcttgatatat 16767527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 44 - 247
Target Start/End: Original strand, 40262526 - 40262729
Alignment:
Q  44 taaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 143  Q
    |||||||||||||||||||||||||||||  |||  | ||   ||| ||||||||||||| | |||||| || ||||||||||||| | |||| |||||     
T  40262526 taaaaggaaaatgctagatatcaagaatggattttcacgatggattcaagaatgacatggtagaataataactcttagatttcagttttatttgttaacg 40262625  T
Q  144 tttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    ||||||          ||||||||||| | || ||||| ||||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  40262626 tttcataaaaaataaatacataacacccaccaccccataatttccggtcagggtgagattttattggctaatattaatttcgggacaatttcttgataaa 40262725  T
Q  244 atct 247  Q
    ||||    
T  40262726 atct 40262729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 45 - 149
Target Start/End: Complemental strand, 22592987 - 22592880
Alignment:
Q  45 aaaaggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttaga--tttcagtctcatttattaa 141  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||| |||||||||||||||||||  ||||||||| |||||||||    
T  22592987 aaaaggaaaatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttttcagtcttatttattaa 22592888  T
Q  142 cctttcat 149  Q
    ||||||||    
T  22592887 cctttcat 22592880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 279
Target Start/End: Complemental strand, 37335829 - 37335753
Alignment:
Q  203 tttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaa 279  Q
    ||||||||||||||||||| |||| ||||||| |||||| |||||||  ||||||||||||||||||||||||||||    
T  37335829 tttattggctaacattaatatcagaacaattttttgatacaatctaaaagtgattattctgccatgtcattcttgaa 37335753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 34320961 - 34321042
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 139  Q
    |||||||||||||||||||||||||||||||           | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34320961 aaggaaaatgctagatatcaagaatgatttt-----------tcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 34321042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 10661891 - 10661964
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  10661891 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 10661964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 35160761 - 35160834
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  35160761 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 35160834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 22592905 - 22592971
Alignment:
Q  241 aaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||||||||||||||| || |||||||||||||||  ||||||||||||||| ||||||||||    
T  22592905 aaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 22592971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 37335894 - 37335824
Alignment:
Q  70 atgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttatt 139  Q
    |||||||||| |||||| |||||| ||||||||| |||| |||||||||||||||||||||||||||||||    
T  37335894 atgattttatcaagaaagatttaataatgacatgacacagtaatcacccttagatttcagtctcatttatt 37335824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 14941427 - 14941354
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| |||||| ||| ||||||||||||||| |||||||||||||||||||    
T  14941427 aatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatcacccttagattt 14941354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 31174905 - 31174822
Alignment:
Q  43 gtaaaaggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| | |||| || |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  31174905 gtaaaagaacaatgttatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatcacccttagattt 31174822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 9293637 - 9293564
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||  || ||||||||||||||| |||||||||||||||||||    
T  9293637 aatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatcacccttagattt 9293564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 9723600 - 9723673
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||| ||||||||||||| |||||||||||| ||  ||||||||| ||||| |||||||||| |||||||    
T  9723600 aaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacatt 9723673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 21393749 - 21393676
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| ||||||||||  ||||| | |||||||||||||||||||||||| | |||||||||||||||||||    
T  21393749 aatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatcacccttagattt 21393676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 21936085 - 21936158
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||| |||||| |||||||||||||||||||    
T  21936085 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 21936158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 23268123 - 23268050
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||||||||||||    
T  23268123 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 23268050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 33380211 - 33380284
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||  |||||||||||||||||||    
T  33380211 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatcacccttagattt 33380284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 33380401 - 33380465
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  33380401 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 33380465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 35160953 - 35161017
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  35160953 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 35161017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 43330916 - 43330989
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | || ||||||| ||||||||||||||| |||||||||||||||||||    
T  43330916 aatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatcacccttagattt 43330989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 3989108 - 3989153
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||    
T  3989108 aagaaaattttaagaatgacatggcagaataatcacccttagattt 3989153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 9293446 - 9293382
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| || |||||||||||||||  |||||| |||||||| ||||||||||    
T  9293446 aaatctaagggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatat 9293382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 9723409 - 9723482
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||| ||||| |||||||| |||||| |||||||||||||||| || |||||||||||||| ||||    
T  9723409 aatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatcacccttaaattt 9723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 10662082 - 10662146
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  10662082 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 10662146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 23267933 - 23267869
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  23267933 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 23267869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 39819317 - 39819272
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaaga 94  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  39819317 ggaaaatgttagatatcaagaatgattttataagaaaaattcaaga 39819272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 34321028 - 34320990
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaa 280  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  34321028 aaatctaagggtgattattgtgccatgtcattcttgaaa 34320990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 316
Target Start/End: Original strand, 40262714 - 40262748
Alignment:
Q  282 tttcttgataaaatctttcttgatatataacattg 316  Q
    |||||||||||||||||||||||||||||||||||    
T  40262714 tttcttgataaaatctttcttgatatataacattg 40262748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 7475379 - 7475315
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| || ||| ||||||||||| ||||||| |||||||| ||||||||||    
T  7475379 aaatctaaaggtgattattatgtcatatcattcttgaatttttctt-ataaaatcattcttgatat 7475315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 7475569 - 7475496
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||  | |||||||||||||||||||    
T  7475569 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatcacccttagattt 7475496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 13354858 - 13354923
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| ||||||| || |||||||| |||||| |||||| ||||||||||||    
T  13354858 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattt 13354923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 21393556 - 21393493
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||| |||||||||||||| || ||||||||||||| |||||||||||| ||||| ||||||||||    
T  21393556 aaatttaagggtgattattgtgtcatgtcattcttg-aattttcttgat-aaatcattcttgatat 21393493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 43331106 - 43331170
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| | ||||||||||||||||  ||||||||| ||||| ||||||||||    
T  43331106 aaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgat-aaatcattcttgatat 43331170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 13355042 - 13355106
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||  ||||||||| |||||||||||||||| |  |||||| |||||||| ||||||||||    
T  13355042 aaatctaaaagtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatat 13355106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 27847644 - 27847709
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||| ||||| |||||||| |||||| ||| |||||||||||| || |||||||||| ||||||||    
T  27847644 atataaagaaagattttattaagaaagattcaagaatgacatgacagaataatcaccgttagattt 27847709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 16767333 - 16767285
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgat 290  Q
    ||||||||| ||||||||| || |||||||||||||||  |||||||||    
T  16767333 aaatctaagagtgattattgtgtcatgtcattcttgaatctttcttgat 16767285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 27847833 - 27847801
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttat 79  Q
    ||||||||||||||||||||||||| |||||||    
T  27847833 aaggaaaatgctagatatcaagaataattttat 27847801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 191; Significance: 1e-103; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 44 - 320
Target Start/End: Complemental strand, 25398513 - 25398237
Alignment:
Q  44 taaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  25398513 taaaaggaaaatgctagatatcaagaatgattttataagaaaaattcaacaatgacatggcacaataatcacctttagatttcagtctcatttattaatc 25398414  T
Q  144 tttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    ||||||          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||    
T  25398413 tttcataaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaa 25398314  T
Q  244 atctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctcg 320  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||    
T  25398313 atctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctcg 25398237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 48 - 319
Target Start/End: Complemental strand, 4892473 - 4892202
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  4892473 aggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 4892374  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  4892373 attaaaagaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 4892274  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  4892273 aagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 4892202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 33584124 - 33584394
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  33584124 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 33584223  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||| ||    
T  33584224 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaattta 33584323  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  33584324 agggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 33584394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 6043307 - 6043576
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  6043307 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 6043406  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || |||||||||||||||| ||| ||||||||||| || ||||||||||||||||||    
T  6043407 taaaaaaaaa-tacataacacccaacaccccatgatttccggccaggctgagattttattggttaatattaatttcagcactatttcttgataaaatcta 6043505  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6043506 agggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 6043576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 3521801 - 3522071
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  3521801 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 3521900  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | || |||||||||||||| ||| || |||||||||||| ||||||||||||||| || |||||||||||||||||    
T  3521901 ataaaaaaaga-tacataacacccaccaccccatgatttccggccaaactaagattttattggttaacattaatttcagaactatttcttgataaaatct 3521999  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    || ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  3522000 aatggtgattattctgccatgtcatttttgaaattttcttgaaaaaatctttcttgatatataacattgctc 3522071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 48 - 319
Target Start/End: Complemental strand, 14138938 - 14138668
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    ||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  14138938 aggaaaatgctagatattaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcaatctcatttattaatctttc 14138839  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | || ||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  14138838 ataaaaaaaaa-tacataacacccaccaccccatgatttccgatcaggctgagattttattggctaacattaatttcaggactatttcttgataaaattt 14138740  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14138739 aagggtgattattctgccatgtaattcttgaaattttcttgataaaatctttcttgatatataacattgctc 14138668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 49 - 315
Target Start/End: Complemental strand, 8145643 - 8145379
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  8145643 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 8145544  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||  || ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||    
T  8145543 taaaaaaaaa-tacataacacccacca-cccatgatttccgaccaggctgagattttattggctaacattagtttcaagactatttcttgataaaatcta 8145446  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8145445 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 8145379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 2477906 - 2477636
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||| |||||||||||||| ||||||||| ||||||    
T  2477906 ggaaaatgctagatatcaagaatgattttataagaaagatctaagaatgacatggcacaatgatcacctttagatttcagtcttatttattaatctttca 2477807  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || ||||| ||||||||| ||||||||||||||| ||| ||||||||||||||||||    
T  2477806 taaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgaaattttattgactaacattaatttcaagactatttcttgataaaatcta 2477707  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  2477706 agggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 2477636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 50 - 319
Target Start/End: Complemental strand, 3363048 - 3362778
Alignment:
Q  50 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||| |||||||    
T  3363048 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataaccacctttagatttcagtctcatttattaatctttcat 3362949  T
Q  150 nnnnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
               ||||||||||| | || |||||||||||||| ||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  3362948 aaaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatcta 3362849  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  3362848 agggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 3362778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 52 - 319
Target Start/End: Complemental strand, 12851069 - 12850801
Alignment:
Q  52 aaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnn 151  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||      
T  12851069 aaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttcataa 12850970  T
Q  152 nnnnnnnn-tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaag 250  Q
             ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  12850969 aaaagaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaag 12850870  T
Q  251 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||    
T  12850869 ggtggttattctgccatgtcatttttggaattttcttgataaaatctttcttgatatatagcattgctc 12850801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 37321587 - 37321859
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||    
T  37321587 aggaaaatgctagatatcaagaatgattttataagaaatattcaagaatgaaatggcacaataatcacctttagatttcagtctcatttattaatctttc 37321686  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | || ||||||||||||||  |  |||||||||||||||||||||||||||||| ||| |||| |||||||||| |    
T  37321687 ataaataaaaaatacataacacccaccaccccatgatttccggctagactgagattttattggctaacattaatttcaagactatttattgataaaattt 37321786  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttctt-gatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  37321787 aagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttagatatatagcattgctc 37321859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 38899520 - 38899791
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||    
T  38899520 ggaaaatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagatttcagtctcatttattaatctttc 38899619  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          || |||||||| | || |||||||||| ||| ||  ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  38899620 ataaaaaaaagatatataacacccaccaccccatgattttcggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatct 38899719  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  38899720 aagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcattgctc 38899791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 70 - 319
Target Start/End: Original strand, 11360947 - 11361196
Alignment:
Q  70 atgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnntacataacac 169  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| | |||||||||| ||| ||||||||| |||||||          ||||||||||    
T  11360947 atgattttataagaaagattcaagaatgacatggcacaataatcatctttagatttcaatctaatttattaatctttcatacaaaaaaaatacataacac 11361046  T
Q  170 caatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgt 269  Q
    | | || |||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11361047 ccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaggactatttcttgataaaatctaagggtgattattctgccatgt 11361146  T
Q  270 cattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  11361147 cattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 11361196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 22912852 - 22913119
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||   |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||   || |||    
T  22912852 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattt--ctctca 22912949  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||| | | || ||||||||||| || |   | ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22912950 taaaaaaaaa-tacataacatccaccaccccatgatttctggcccgacagagattttattggctaacattaatttcagtacaatttcttgataaaatcta 22913048  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  22913049 agggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcattgctc 22913119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 90 - 319
Target Start/End: Original strand, 4433844 - 4434072
Alignment:
Q  90 taagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnntacataacaccaatcatcccatgatttccg 189  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||          ||||||||||| | ||||||||||||||||    
T  4433844 taagaatgacatggcacaataatcacctttagatttcagtcttatttattaatctttcataaaaaaaaa-tacataacacccaccatcccatgatttccg 4433942  T
Q  190 gtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttga 289  Q
    | ||  ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |    
T  4433943 gccagactgagattttattggttaacattaatttcagaactatttcttgataaaatctaagggtgattattctgccatatcattcttgaaattttcttaa 4434042  T
Q  290 taaaatctttcttgatatataacattgctc 319  Q
     |||||||||||||||||||| ||||||||    
T  4434043 aaaaatctttcttgatatatagcattgctc 4434072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 48 - 320
Target Start/End: Original strand, 12614531 - 12614799
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaa-atttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||| |||||||||| | |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12614531 aggaaaatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaaccttt 12614630  T
Q  147 catnnnnnnnnnntaca--taacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    |||           | |  ||||||| | |||||||| |        || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12614631 cataaaaaaaaaaaaaaaataacacccaccatcccataaa-------caggctgagattttattggctaacattaatttcaggacaatttcttgataaaa 12614723  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctcg 320  Q
    |||||||||||||||| || |||||||||||||||  |||||||||||||| |||||||||||||| |||||||||    
T  12614724 tctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcattgctcg 12614799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 48 - 319
Target Start/End: Original strand, 17545476 - 17545750
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||||||||||||||||||||   || ||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||||    
T  17545476 aggaaaatgctagatatcaagaatgatttatcaaaaaatatttaagaatgacatgacacaataatcatccttagatttcagtctcatttatt--cctttc 17545573  T
Q  148 atnnnnnnnnnn-----tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataa 242  Q
    |                || |||||||| | || |||||||||||||| |   | |||||||||||| |||||||||||||||| |||||||||||||||    
T  17545574 aataaaaaaaataaaaataaataacacccaccaccccatgatttccggcccgacagagattttattgactaacattaatttcagtacaatttcttgataa 17545673  T
Q  243 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||| ||| | |||||||||||||| ||||||||    
T  17545674 aatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaattttttcttgatatatagcattgctc 17545750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 80 - 291
Target Start/End: Original strand, 31640767 - 31640977
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatnnnnnnnnnntacataacaccaatcatccc 179  Q
    |||||| ||| ||||||||||||||| |||||||  | |||||||    ||| |||||||||||||||||          ||||||||||| | || |||    
T  31640767 aagaaagattcaagaatgacatggcagaataatcgactttagattgatatcttatttattaacctttcataaaaaaaaa-tacataacacccaccacccc 31640865  T
Q  180 atgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaa 279  Q
    ||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31640866 atgatttccggccaggctgagattttattggctaacattaatttcatgacaatttcttgataaaatctaagggtggttattctgccatgtcattcttgaa 31640965  T
Q  280 attttcttgata 291  Q
      ||||||||||    
T  31640966 tctttcttgata 31640977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 66 - 315
Target Start/End: Complemental strand, 27482077 - 27481830
Alignment:
Q  66 aagaatgattttataagaaaa-atttaagaatgacatggcacaataatcacccttagatttc-agtctcatttattaacctttcatnnnnnnnnnntaca 163  Q
    |||||||||||||| | |||| ||| |||||||||||  || |||||||||| ||||||||  | ||| |||||||||||||| ||          ||||    
T  27482077 aagaatgattttatcaaaaaagattcaagaatgacataacagaataatcacctttagatttttaatcttatttattaaccttttataaaaaaaaaataca 27481978  T
Q  164 taacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctg 263  Q
    ||||||| | || |||||||||||||   | | ||| ||||||||||||||||||||||||  ||||||||||| |||||| ||||  ||||||||||      
T  27481977 taacacccaccaccccatgatttccgactaggatgaaattttattggctaacattaatttcgtgacaatttcttcataaaa-ctaaatgtgattattc-- 27481881  T
Q  264 ccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
     ||||||||||||||| |||||||||||||||||||||| ||| ||| ||||    
T  27481880 -catgtcattcttgaatttttcttgataaaatctttcttaatacatagcatt 27481830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 2477640 - 2477713
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  2477640 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 2477713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 11361192 - 11361119
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  11361192 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattt 11361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 4892206 - 4892279
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  4892206 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4892279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 22913115 - 22913042
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | |||||||||| ||||||||||||||| |||||||||||||||||||    
T  22913115 aatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatcacccttagattt 22913042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 25398242 - 25398315
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  25398242 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 25398315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 10458465 - 10458409
Alignment:
Q  251 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||    
T  10458465 ggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 4892396 - 4892460
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  4892396 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 4892460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 6043572 - 6043499
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||| | |||||||||||||||||||    
T  6043572 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatcacccttagattt 6043499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 8145387 - 8145452
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  8145387 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8145452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 22912928 - 22912864
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||| ||||||||||    
T  22912928 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 22912864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 33584200 - 33584136
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  33584200 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 33584136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 33584390 - 33584317
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||||||| ||||    
T  33584390 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 33584317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 37321855 - 37321781
Alignment:
Q  53 aatgctagatatc-aagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| ||||| ||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||    
T  37321855 aatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattt 37321781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 3362782 - 3362855
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |  ||||||||||||||| ||||| |||||||||||||    
T  3362782 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 3362855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 3521878 - 3521814
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  3521878 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 3521814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 4434068 - 4433995
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || |||||||| |||||| |||||||||||||||||||    
T  4434068 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatcacccttagattt 4433995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 6043383 - 6043319
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| ||||||||||    
T  6043383 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatat 6043319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 8145567 - 8145631
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  8145567 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 8145631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 12614794 - 12614721
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| ||||||||||  ||||||| |||||| ||| |||||||||||| || |||||||||||||||||||    
T  12614794 aatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatcacccttagattt 12614721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 12850996 - 12851060
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||| ||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  12850996 aaatctaaaggtggttattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 12851060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 25398432 - 25398496
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||| ||||| ||||||| |||||||| ||||||||||    
T  25398432 aaatctaaaggtgattattgtgccatgtcattgttgaatttttctt-ataaaatcattcttgatat 25398496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 38899597 - 38899532
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||| ||||| |||||||||||||||||| |||| || |||||||| ||||||||||    
T  38899597 aaatctaaaggtggttattgtgccatgtcattcttgaatttttttttataaaatcattcttgatat 38899532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 38899787 - 38899714
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |  ||||||||||||||| ||||| |||||||||||||    
T  38899787 aatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattt 38899714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 13664787 - 13664737
Alignment:
Q  91 aagaatgacatggcacaataatcacccttagatttcagtctcatttattaa 141  Q
    ||||||||||||  | ||||||||||||||||||||||||| |||||||||    
T  13664787 aagaatgacatgatagaataatcacccttagatttcagtcttatttattaa 13664737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 36880229 - 36880299
Alignment:
Q  160 tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggaca 230  Q
    ||||||||| | | |||||||| |||||||  ||  |||| ||||||||||||||||||||||||||||||    
T  36880229 tacataacatccaccatcccataatttccgaccagactgaaattttattggctaacattaatttcaggaca 36880299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 12614609 - 12614544
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||| ||  ||| ||||||||||| | ||||||||    
T  12614609 aaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatat 12614544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 12850805 - 12850878
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |  || |||||||||||| ||||| |||||||||||||    
T  12850805 aatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataaccacccttagattt 12850878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 319
Target Start/End: Complemental strand, 13664679 - 13664642
Alignment:
Q  282 tttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  13664679 tttcttgataaaatctttcttaatatataacattgctc 13664642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 14138680 - 14138745
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| ||||||| || |||||| |||||||| |||||||||||||| ||||    
T  14138680 atatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatcacccttaaattt 14138745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 14138861 - 14138925
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||| ||||    
T  14138861 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttaatat 14138925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 17545718 - 17545673
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||    
T  17545718 aagaaaaattcaagaatgacatggcagaataatcaccattagattt 17545673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 302
Target Start/End: Original strand, 27482016 - 27482077
Alignment:
Q  241 aaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttctt 302  Q
    ||||||||| |||||||||||||  ||||||||||||||  ||| ||||||||||| |||||    
T  27482016 aaaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 37321664 - 37321600
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||| |||||||||||  |||||| |||||||| ||||||||||    
T  37321664 aaatctaaaggtgattattgtgccatttcattcttgaatatttctt-ataaaatcattcttgatat 37321600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 10458409 - 10458465
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacc 116  Q
    ||||||||||  ||||||| |||||||||| ||||||||||||||| ||||||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatcacc 10458465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 36880171 - 36880213
Alignment:
Q  108 ataatcacccttagattt-cagtctcatttattaacctttcat 149  Q
    |||||||||||||||||| ||||||||| ||||||||||||||    
T  36880171 ataatcacccttagattttcagtctcatctattaacctttcat 36880213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 3362973 - 3363037
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||| ||||| || |||||||||||| || ||||||| |||||||| ||||||||||    
T  3362973 aaatctaaaggtggttattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatat 3363037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 3522059 - 3521994
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||| | ||||||| || || |||||||||||| |||||||||| ||||||||    
T  3522059 atatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatcaccattagattt 3521994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 12614516 - 12614483
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttat 79  Q
    |||| |||||||||||||||||||||||||||||    
T  12614516 aaagaaaaatgctagatatcaagaatgattttat 12614483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 13664753 - 13664790
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaa 279  Q
    |||||||||||||||||||||  |||||||||||||||    
T  13664753 aaatctaagggtgattattctatcatgtcattcttgaa 13664790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 291
Target Start/End: Complemental strand, 31640800 - 31640763
Alignment:
Q  254 gattattctgccatgtcattcttgaaattttcttgata 291  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  31640800 gattattctgccatgtcattcttgaatctttcttgata 31640763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 31640973 - 31640928
Alignment:
Q  80 aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||| ||| ||||||||||||||| ||||| |||||||||||||    
T  31640973 aagaaagattcaagaatgacatggcagaataaccacccttagattt 31640928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 190; Significance: 1e-103; HSPs: 8)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 45 - 308
Target Start/End: Complemental strand, 26210 - 25947
Alignment:
Q  45 aaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  26210 aaaaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 26111  T
Q  145 ttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    |||||          ||||||||||| | ||||||||||||||||| ||  ||||||||||||||| ||||||||||||||| || ||||||||||||||    
T  26110 ttcataaaaaaaagatacataacacccaccatcccatgatttccggccagcctgagattttattggttaacattaatttcagaactatttcttgataaaa 26011  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26010 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 45 - 308
Target Start/End: Complemental strand, 16258 - 15995
Alignment:
Q  45 aaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||| ||    
T  16258 aaaaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcatctttagatttcagtctcatttattaatct 16159  T
Q  145 ttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    |||||          ||||||||||| | ||||||||||||||||| ||  ||||||||||||||| ||||||||||||||| || ||||||||||||||    
T  16158 ttcataaaaaaaagatacataacacccaccatcccatgatttccggccagcctgagattttattggttaacattaatttcagaactatttcttgataaaa 16059  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16058 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 15995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 118 - 308
Target Start/End: Complemental strand, 8603 - 8413
Alignment:
Q  118 ttagatttcagtctcatttattaacctttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacat 217  Q
    |||||||||||||||||||||||| |||||||          ||||||||||| | ||||||||||||||||| ||  ||||||||||||||| ||||||    
T  8603 ttagatttcagtctcatttattaatctttcataaaaaaaagatacataacacccaccatcccatgatttccggccagcctgagattttattggttaacat 8504  T
Q  218 taatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 308  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8503 taatttcagaactatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatata 8413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 8414 - 8479
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  8414 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 15996 - 16061
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  15996 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 25948 - 26013
Alignment:
Q  61 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  25948 atatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 26013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 26130 - 26194
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  26130 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 26194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 16178 - 16242
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| | |||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  16178 aaatctaaagatgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 16242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 50 - 319
Target Start/End: Complemental strand, 40215257 - 40214988
Alignment:
Q  50 gaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 149  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||    
T  40215257 gaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatatttcat 40215158  T
Q  150 nnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaa 249  Q
              ||||||||||| | || |||||||||||||| || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  40215157 aaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaagactatttcttgataaaatctaa 40215058  T
Q  250 gggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40215057 gggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 40214988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 48 - 319
Target Start/End: Complemental strand, 19015675 - 19015404
Alignment:
Q  48 aggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttc 147  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  19015675 aggaaaatgctacatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttc 19015576  T
Q  148 atnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    ||          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  19015575 atacaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatct 19015476  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  19015475 aagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 19015404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 47 - 319
Target Start/End: Original strand, 36966501 - 36966773
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  36966501 aaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaataacatggcacaataatcacctttagatttcagtctcatttattaatcttt 36966600  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||||| | || |||||||||||||| ||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  36966601 cataaaaaaaagatacataacacccaccaccccatgatttccggccagactgagattttattggttaacattaatttcaggactatttcttgataaaatc 36966700  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  36966701 taagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 36966773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 37821629 - 37821899
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  37821629 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatctttca 37821728  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||| ||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37821729 taaaaaaaagatacataacacccaacaccccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatcta 37821828  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  37821829 agggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 37821899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 6883757 - 6883487
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||||    
T  6883757 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcataatattcacctttagatttcagtctcatttattaatctttca 6883658  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  6883657 taaaaaaaagatacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatcta 6883558  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||| ||||||||    
T  6883557 agggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcattgctc 6883487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 25463946 - 25463676
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  25463946 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgacatggcacaataatcacctttagatttaagtctcatttattaatctttca 25463847  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  25463846 taaaaaaaaaatacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaagactatttcttgataaaatcta 25463747  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  25463746 agggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcattgctc 25463676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 46 - 319
Target Start/End: Original strand, 41876234 - 41876507
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt 145  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||| |||    
T  41876234 aaaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatagcacaataatcacctttagatttcagtctcatttattaatctt 41876333  T
Q  146 tcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaat 245  Q
    ||||          ||||||||||| | || |||||||||| ||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||     
T  41876334 tcataaaaaaaagatacataacacccaccaccccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaac 41876433  T
Q  246 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||| ||||||||    
T  41876434 ctaagggtgattattctgccatgtcattcttaaaatttttttgaaaaaatctttcttgatatatagcattgctc 41876507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 47 - 320
Target Start/End: Complemental strand, 44094969 - 44094697
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||| ||||||||||||| ||  |||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||    
T  44094969 aaggaaaatgctagatatcaagaattattttataagaaagatccaagaatgacatgacacaataatcacctttagatttcagtctcatttattaatcttt 44094870  T
Q  147 catnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |||          ||||||||||| | || |||||||||||||| ||  |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  44094869 cataaagaaaaa-tacataacacccaccaccccatgatttccggccagactgagattttattggctaacattaatttcaggattatttcttgataaaatc 44094771  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctcg 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  44094770 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcattgctcg 44094697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 47 - 319
Target Start/End: Complemental strand, 18404720 - 18404442
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaaccttt 146  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  18404720 aaggaaaatgctagatatcaagaatgattttataagaaagatttaagaatgacatggcacaataatcacatttagatttcagtctcatttattaatcttt 18404621  T
Q  147 catnnnnnnnnnn------tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgat 240  Q
    |||                ||||||||||| | || || ||||||||||  ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  18404620 cataaaataaaataaaaaatacataacacccaccaccctatgatttccgaccaaactgagattttattggctaacattaatttcaggactatttcttgat 18404521  T
Q  241 aaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  18404520 aaaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcattgctc 18404442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 45 - 319
Target Start/End: Complemental strand, 51737779 - 51737510
Alignment:
Q  45 aaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  51737779 aaaaggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatct 51737680  T
Q  145 ttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    |||||          ||||||||||| | || |||||||||| |||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  51737679 ttcataaaaaaaagatacataacacccaccaccccatgattttcggtcaggctgagattttattggttaacattaatttcaggactatttcttgataaaa 51737580  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    | ||||||||||||||||||| | |||||||| |||||||||||     | ||||||||||||||| ||||||||    
T  51737579 tttaagggtgattattctgccttatcattcttaaaattttcttg-----aactttcttgatatatagcattgctc 51737510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 9910086 - 9910358
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||| ||||||    
T  9910086 ggaaaatgttagatatcaagaatgattttataagaaaaattcaagaatgacatggcacaataatcacctttagatttcagacttatttattaatctttca 9910185  T
Q  149 tnnnnnnnnnnta--cataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatc 246  Q
    |           |  ||||||||| | || |||||||||||||| ||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  9910186 taaaaaaaaaagatgcataacacccaccaccccatgatttccggccatactgagattttattggttaacattaatttcaggactatttcttgataaaatc 9910285  T
Q  247 taagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  9910286 taaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 9910358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 25973677 - 25973414
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||||||||||||||||||| ||||||    
T  25973677 ggaaaatgctagatatcaagaatgattttataagaaaaattcaagaatgacatgacacaataatcacctttaaatttcagtctcatttattaatctttca 25973578  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||| ||| ||    |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25973577 taaaaaaaa--tacataacacccaccaccccatgattttcggcca----gagattttattggctaacattaatttcaggattatttcttgataaaatcta 25973484  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25973483 agggtgattattctgcc-tgtcattcttgaaattttcatgataaaatctttcttgatatataacattgctc 25973414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 49 - 316
Target Start/End: Complemental strand, 3559887 - 3559620
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||||||| ||| ||||||||||||| ||| |||||||||||||||||||| ||||||    
T  3559887 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatgacacaataatcacctttatatttcagtctcatttattaatctttca 3559788  T
Q  149 tnnnnnnnnnntacat-aacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    |          ||||| |||||| | || |||||||||||||  || ||||||||||||||||||||||||||||||| ||| ||||||||||||||| |    
T  3559787 taaaaaaaaa-tacattaacacccaccaccccatgatttccgcccaggctgagattttattggctaacattaatttcaagactatttcttgataaaattt 3559689  T
Q  248 aagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattg 316  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||    
T  3559688 aagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcattg 3559620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 49 - 319
Target Start/End: Original strand, 32000061 - 32000332
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||   |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||    
T  32000061 ggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttattca--tttca 32000158  T
Q  149 tnnnnnnnnnn---tacataacaccaatcatcccatgatttccgg-tcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    |             ||||||||||| | || |||||||||||||| || |  | |||||||||||||||||||||||||||| |||||||||||||||||    
T  32000159 taaaaaataaaaaatacataacacccaccaccccatgatttccggctcgacat-agattttattggctaacattaatttcagtacaatttcttgataaaa 32000257  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  32000258 tctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcattgctc 32000332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 51 - 319
Target Start/End: Complemental strand, 40273976 - 40273702
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatn 150  Q
    ||||||||||||||||||||||||||   |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||     
T  40273976 aaaatgctagatatcaagaatgatttatcaagaaatattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--cctttcata 40273879  T
Q  151 nnnnnnnnn--------tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataa 242  Q
                     ||||||||||| | || |||||||||||||| |   | ||||||||||||||||||||||||||||| |||||||||| ||||    
T  40273878 aaaaaaaaaaaaaataatacataacacccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttaataa 40273779  T
Q  243 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||||||| || ||||||||    
T  40273778 aatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcattgctc 40273702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 45 - 246
Target Start/End: Original strand, 20304921 - 20305123
Alignment:
Q  45 aaaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||| || ||    
T  20304921 aaaaggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatggcacaataatcacctttagatttcagtctcatttatcaatct 20305020  T
Q  145 ttcat-nnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    |||||           ||||||||||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  20305021 ttcataaaaaaaaaaatacataacacccaccatcccatgattttcggccaagctgagattttattggctaacattaatttcaggattatttcttgataaa 20305120  T
Q  244 atc 246  Q
    |||    
T  20305121 atc 20305123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 47 - 310
Target Start/End: Original strand, 27523048 - 27523311
Alignment:
Q  47 aaggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt 145  Q
    |||||||||| || ||||||||||||||||||| |||||| ||| ||||||   |||||| | ||||||||||| ||||| ||||| |||||||||| ||    
T  27523048 aaggaaaatgttatatatcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatcaccctttgattttagtcttatttattaacttt 27523147  T
Q  146 tcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaat 245  Q
    ||||          ||||||||||| |||| |||||||||||||| || | |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27523148 tcataaaaaaaaa-tacataacacccatcaccccatgatttccggccaggatgagattttattggctaacattaatttcgggacaatttcttgataaaat 27523246  T
Q  246 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatata 310  Q
     ||||||||||||||||| |||||||||||| || |||||||||||||||  |||||||| ||||    
T  27523247 ttaagggtgattattctgtcatgtcattcttaaatttttcttgataaaattgttcttgatgtata 27523311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 46 - 307
Target Start/End: Original strand, 33786423 - 33786687
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctt 145  Q
    |||||||||||||||||||||||||||||||   |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  33786423 aaaggaaaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttagatttcagtctcatttatt--cctt 33786520  T
Q  146 tcatnnnnnnnnnnta------cataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttga 239  Q
    ||||           |      ||||||| | | || |||||||||||||| |   | ||||||||||||||||||||||||||||| ||||||||||||    
T  33786521 tcataaaaaaaaaaaaaaaatgcataacatccaccaccccatgatttccggcccgacagagattttattggctaacattaatttcagtacaatttcttga 33786620  T
Q  240 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||| |||||||||||||| ||||||||||||||||||  ||||||||| ||||| ||||||||||    
T  33786621 taaaatttaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 33786687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 45 - 319
Target Start/End: Original strand, 44690812 - 44691094
Alignment:
Q  45 aaaaggaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacc 143  Q
    ||||| |||||| |||||||||| ||||||||||| |||||| ||| ||||||||||||||| |||||||||||||||||| |||||| ||||||||| |    
T  44690812 aaaagaaaaatgttagatatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatcacccttagattccagtcttatttattaatc 44690911  T
Q  144 tttcatnnnnnnnnnn-------tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttct 236  Q
    ||| ||                 ||||||||||| | || |||||||||||||| ||  ||||||||||||||||||||||||||||  ||| |||||||    
T  44690912 ttttataaaaaataaaaaataaatacataacacccaacaccccatgatttccggccagactgagattttattggctaacattaattttgggataatttct 44691011  T
Q  237 tgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||| || ||||||||||||||| |||||||||  ||| || |||||||||||||||||||| ||||||||||    
T  44691012 tgataaaatctaagagttattattctgccatgtaattcttgaatctttttttataaaatctttcttgatatacaacattgctc 44691094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 202 - 315
Target Start/End: Original strand, 16045746 - 16045859
Alignment:
Q  202 ttttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttct 301  Q
    |||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16045746 ttttattggctaacattaatttcaagaatatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttct 16045845  T
Q  302 tgatatataacatt 315  Q
    ||||||||| ||||    
T  16045846 tgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 329
Target Start/End: Complemental strand, 34519874 - 34519748
Alignment:
Q  203 tttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttctt 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||| | ||| |||| |||||  |||||| ||||||||||||||    
T  34519874 tttattggctaacattaatttcaggacaattttttgataaaatctaaggtcgattattcttctatggcatttttgaatctttcttaataaaatctttctt 34519775  T
Q  303 gatatataacattgctcgatgtaaaat 329  Q
    |||||||| |||||||| || ||||||    
T  34519774 gatatatagcattgctctatctaaaat 34519748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 46 - 291
Target Start/End: Complemental strand, 10167673 - 10167428
Alignment:
Q  46 aaaggaaaatgctagatatcaagaatgattttataagaaaa-atttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacct 144  Q
    ||||||||||| || |||| |||||||||||||||| |||| |||||||||| | |||  |||||||||||| |||||||||||||| |||||||||  |    
T  10167673 aaaggaaaatgttacatattaagaatgattttataaaaaaatatttaagaataatatgatacaataatcacctttagatttcagtcttatttattaattt 10167574  T
Q  145 ttcatnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaa 244  Q
    |||||          |||| |||||  | ||  |||| |||||||||||  |  | ||||||||||||||||||||||| | |||||||| |||||||||    
T  10167573 ttcat-aaaaaaaaatacacaacacacaccaaaccataatttccggtcagaccaaaattttattggctaacattaatttaaagacaattttttgataaaa 10167475  T
Q  245 tctaagggtgattattctgccatgtcattcttgaaattttcttgata 291  Q
    |||||   ||||||||||  |||||||||||| ||  ||||||||||    
T  10167474 tctaaaaatgattattctatcatgtcattcttaaatctttcttgata 10167428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 19722894 - 19722970
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||    
T  19722894 ggaaaatgttagatatcaagaatgattttataagaaagattcaagaatgacatgacacaataatcacctttagattt 19722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 315
Target Start/End: Complemental strand, 44690892 - 44690820
Alignment:
Q  243 aatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||| || ||||||| |||||||    
T  44690892 aatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatt 44690820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 25463680 - 25463753
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||||||||    
T  25463680 aatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatcacccttagattt 25463753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 33786696 - 33786623
Alignment:
Q  52 aaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||||||||||||||||||   |||||| ||| |||||||||||||||||||||||||||||| ||||    
T  33786696 aaatgctagatatcaagaatgatttatcaagaaagattcaagaatgacatggcacaataatcacccttaaattt 33786623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 9910162 - 9910090
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  9910162 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatatctaacatt 9910090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 16045859 - 16045786
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  16045859 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 16045786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 40214992 - 40215065
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  40214992 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 40215065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 40273706 - 40273779
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||||||||||| |||||| | |||||||||| |||||||||||| || |||||||||||||||||||    
T  40273706 aatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattt 40273779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 315
Target Start/End: Complemental strand, 27523129 - 27523054
Alignment:
Q  240 taaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    ||||||| ||||||||||| ||||||||   |||||||||  ||||||||||||||| ||||||||||||||||||    
T  27523129 taaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacatt 27523054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 3559621 - 3559694
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| | |||||||| ||||||||||||||| |||||||||||||| ||||    
T  3559621 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttaaattt 3559694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 18404446 - 18404519
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||| | |||||||||| ||||||||    
T  18404446 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatcacctttagattt 18404519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 19015598 - 19015662
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  19015598 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 19015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 32000137 - 32000073
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||| ||||||||||    
T  32000137 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 32000073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 33786502 - 33786438
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||| ||||||||||    
T  33786502 aaatctaagggtgattattgtgccatgtcattcttgaatctttcttgat-aaatcattcttgatat 33786438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 40273902 - 40273966
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||||| ||||| ||||||||||    
T  40273902 aaatctaagggtgattattgtgccatgtcattcttgaatatttcttgat-aaatcattcttgatat 40273966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 44094702 - 44094775
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| ||||||||||  ||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  44094702 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 44094775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 51737699 - 51737763
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  51737699 aaatctaaaggtgattattgtgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 51737763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 22157333 - 22157433
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||| ||||| ||  || ||   ||||||||||||||||| | ||||||||| |||| |||||| ||| |||||||||| |||||    
T  22157333 ggaaaatgctagatatcaaaaatgaattcttatgatggatttaagaatgacatgggagaataatcacacttaaatttcaatcttatttattaacatttca 22157432  T
Q  149 t 149  Q
    |    
T  22157433 t 22157433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 52064373 - 52064445
Alignment:
Q  50 gaaaatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttag 121  Q
    |||||||||||||||||| ||||||||||| |||||| ||| |||||||||||| || |||| ||||||||||    
T  52064373 gaaaatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaatattcacccttag 52064445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 52329503 - 52329445
Alignment:
Q  91 aagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcat 149  Q
    ||||||||||| ||| ||||||||||||||||||||||||| | |||||||| ||||||    
T  52329503 aagaatgacatagcagaataatcacccttagatttcagtcttaattattaacgtttcat 52329445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 6883491 - 6883564
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||| ||||| |||||| | ||||||| || ||||||||||||||| |||||||||||||||||||    
T  6883491 aatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatcacccttagattt 6883564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 6883681 - 6883745
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| ||||| |||| |||||||||||||||||| ||||||| |||||||| ||||||||||    
T  6883681 aaatctaaaggtgaatattatgccatgtcattcttgaatttttctt-ataaaatcattcttgatat 6883745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 9910354 - 9910281
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||| ||||||||||    
T  9910354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcaaccttagattt 9910281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 19015408 - 19015481
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || |||||||| |||||| |||||||||||||||||||    
T  19015408 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 19015481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 315
Target Start/End: Complemental strand, 19722970 - 19722898
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||| |||||||||| || |||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttctt-ataaaatcattcttgatatctaacatt 19722898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 20305001 - 20304937
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  20305001 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 20304937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 32000328 - 32000255
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | |||||||||| |||||||||||| || ||||| |||||||||||||    
T  32000328 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataaccacccttagattt 32000255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 36966769 - 36966696
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || |||||||| |||||| |||||||||||||||||||    
T  36966769 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 36966696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 37821705 - 37821641
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  37821705 aaatctaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 37821641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Complemental strand, 37821895 - 37821822
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || |||||||| |||||| |||||||||||||||||||    
T  37821895 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattt 37821822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 40215182 - 40215246
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||||||||||||||||||  |||||| |||||||| ||||||||||    
T  40215182 aaatctaaaggtgattattgtgccatgtcattcttgaatctttctt-ataaaatcattcttgatat 40215246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 41876313 - 41876249
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||||| |||||||| ||||||||||    
T  41876313 aaatctaaaggtgattattgtgctatgtcattcttgaatttttctt-ataaaatcattcttgatat 41876249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 41876503 - 41876434
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttag 121  Q
    ||||||| |||||||||| |||||| | | |||||||| ||||||||||||||| |||||||||||||||    
T  41876503 aatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatcacccttag 41876434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 52064445 - 52064384
Alignment:
Q  246 ctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||||| ||||||| |||||||||||||||  ||||||||||||||| || |||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatat 52064384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 27523306 - 27523243
Alignment:
Q  63 atcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||||  ||||||| ||||||||||||||||||||||| || |||||||||||||| ||||    
T  27523306 atcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatcacccttaaattt 27523243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 51621053 - 51621002
Alignment:
Q  196 ctgagattttattggctaacattaatttcaggacaatttcttgataaaatct 247  Q
    |||||||||||||| |||||||||||||| |||| ||||||| |||||||||    
T  51621053 ctgagattttattgactaacattaatttctggactatttcttaataaaatct 51621002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 52329427 - 52329345
Alignment:
Q  160 tacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaa 243  Q
    ||||||||||| | || ||||||||||| || || |||||||||||||||| ||||||||||||| | ||  ||||||||||||    
T  52329427 tacataacacctacca-cccatgatttctggccaggctgagattttattggttaacattaatttcggaactctttcttgataaa 52329345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 25463870 - 25463934
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| |||||||||| |||||||||||||||| |  |||||| |||||||| ||||||||||    
T  25463870 aaatctaaaggtgattattgtgccatgtcattcttggatctttctt-ataaaatcattcttgatat 25463934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 25973601 - 25973665
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||| ||| |||||||||| || ||||||||||||||| ||||||| |||||||| ||||||||||    
T  25973601 aaatttaaaggtgattattgtgtcatgtcattcttgaatttttctt-ataaaatcattcttgatat 25973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 319
Target Start/End: Complemental strand, 52329356 - 52329319
Alignment:
Q  282 tttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||| |||||||||||||||||||||||||    
T  52329356 tttcttgataaattctttcttgatatataacattgctc 52329319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 52329469 - 52329506
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaa 279  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  52329469 aaatctaagggtgattattctgctatgtcattcttgaa 52329506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 18404642 - 18404706
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    ||||||||  ||||||||| ||||||||||||||| ||  |||||| |||||||| ||||||||||    
T  18404642 aaatctaaatgtgattattgtgccatgtcattcttaaatctttctt-ataaaatcattcttgatat 18404706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 248
Target Start/End: Original strand, 22159230 - 22159267
Alignment:
Q  211 ctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  22159230 ctaacaataatttcgggacaatttcttgataaaatcta 22159267  T

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Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 125
Target Start/End: Original strand, 25973426 - 25973490
Alignment:
Q  61 atatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||||| |||||||| |  ||||||| |||||||||| |||| |||||||||||||||||||    
T  25973426 atatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatcacccttagattt 25973490  T

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Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 319
Target Start/End: Complemental strand, 51621017 - 51620980
Alignment:
Q  282 tttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  51621017 tttcttaataaaatctttcttgatatatagcattgctc 51620980  T

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Target: scaffold0204 (Bit Score: 185; Significance: 1e-100; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 4666 - 4396
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  4666 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgatatggcacaataatcacctttagatttcagtctcatttattaatctttca 4567  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||| ||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4566 taaaaaacagatacataacacccaccaccccatgattttcggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatcta 4467  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  4466 agggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcattgctc 4396  T

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Target: scaffold0204; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 4400 - 4473
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||||||||||||    
T  4400 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattt 4473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 181; Significance: 9e-98; HSPs: 3)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 11891 - 11621
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  11891 ggaaaatgttagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacctttagatttcagtctcatttattaatctttca 11792  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||  | || |||||||||| ||| || |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  11791 taaaaaaaaaatacataacactcaccaccccatgattttcggccaggctgagattttattggttaacattaatttcatgactatttcttgataaaatcta 11692  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11691 agggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcattgctc 11621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 11625 - 11698
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||||||| || |||||||||||||||||||    
T  11625 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattt 11698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 242 - 315
Target Start/End: Original strand, 11815 - 11887
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacatt 315  Q
    |||||||| |||||||||| ||||||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  11815 aaatctaaaggtgattattgtgccatgtcattcttaaatttttctt-ataaaatcattcttgatatctaacatt 11887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 179; Significance: 1e-96; HSPs: 3)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 51 - 319
Target Start/End: Complemental strand, 13110 - 12842
Alignment:
Q  51 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttcatn 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| |||||||     
T  13110 aaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatgacacaataattacctttagatttcagtctcatttattaatctttcata 13011  T
Q  151 nnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaag 250  Q
             ||||||||| | | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  13010 aaaaaaagatacataacatccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatctaag 12911  T
Q  251 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  12910 gatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcattgctc 12842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 12846 - 12919
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||| ||||||||||    
T  12846 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattt 12919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 13036 - 13100
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| ||| |||||| || |||||||||||| || ||||||| |||||||| ||||||||||    
T  13036 aaatctaaaggtaattattgtgtcatgtcattcttaaatttttctt-ataaaatcattcttgatat 13100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 177; Significance: 2e-95; HSPs: 3)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 49 - 320
Target Start/End: Complemental strand, 48119 - 47849
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||| | |||||||||||||||||||||||| ||||||    
T  48119 ggaaaatgctagatatcaagaatgattttataagaaagattcaagaatgacatagcacaataatcatctttagatttcagtctcatttattaatctttca 48020  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  48019 taaaaataaa-tacataacacccaccaccccatgatttccggccaggctgagattttattggttaacattaatttcaggactatttcttgataaaatcta 47921  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctcg 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  47920 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcattgctcg 47849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 47854 - 47927
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    |||||||  ||||||||| |||||||| ||||||| || ||||||||||||||| |||||||||||||||||||    
T  47854 aatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 47927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 48043 - 48107
Alignment:
Q  242 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 307  Q
    |||||||| | |||||||| ||| ||||||||||||||  |||||| |||||||| ||||||||||    
T  48043 aaatctaaagatgattattgtgctatgtcattcttgaatctttctt-ataaaatcattcttgatat 48107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 49 - 319
Target Start/End: Complemental strand, 41280 - 41011
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcacccttagatttcagtctcatttattaacctttca 148  Q
    ||||||||||||||||||||||||||||||||||||| ||  |||||||| |||| |||||||||||| |||||||||||||||||||||||| ||||||    
T  41280 ggaaaatgctagatatcaagaatgattttataagaaagatccaagaatgatatggtacaataatcacctttagatttcagtctcatttattaatctttca 41181  T
Q  149 tnnnnnnnnnntacataacaccaatcatcccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatcta 248  Q
    |          ||||||||||| | || |||||||||||||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  41180 taaaaaaaaa-tacataacacccaccaccccatgatttccggccaggctgagattttattggctaacattaatttcaagactatttcttgataaaatcta 41082  T
Q  249 agggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatataacattgctc 319  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  41081 agggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcattgctc 41011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 41015 - 41088
Alignment:
Q  53 aatgctagatatcaagaatgattttataagaaaaattt-aagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| | |||||||| ||||||||||||||| |||||||||||||||||||    
T  41015 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattt 41088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 104; Significance: 8e-52; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 195 - 318
Target Start/End: Complemental strand, 3192 - 3069
Alignment:
Q  195 gctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaa 294  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  3192 gctgagattttattggctaacattaatttcaagactatttcttgataaaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaa 3093  T
Q  295 tctttcttgatatataacattgct 318  Q
    |||||||||||||||| |||||||    
T  3092 tctttcttgatatatagcattgct 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 3072 - 3145
Alignment:
Q  53 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacccttagattt 125  Q
    ||||||| |||||||||| |||||||| || |||| |||||||||||||||||| |||||||||||||||||||    
T  3072 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattt 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 177 - 293
Target Start/End: Complemental strand, 85568 - 85452
Alignment:
Q  177 cccatgatttccggtcaagctgagattttattggctaacattaatttcaggacaatttcttgataaaatctaagggtgattattctgccatgtcattctt 276  Q
    |||||||||| ||  || ||| |||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||||||||||    
T  85568 cccatgattttcgaccaggctaagattttattggctaacattaatttcaggataatttcttcataaaatttaaggatgattattctgccatgtcattctt 85469  T
Q  277 gaaattttcttgataaa 293  Q
    ||  |||||||||||||    
T  85468 gagtttttcttgataaa 85452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 85642 - 85577
Alignment:
Q  49 ggaaaatgctagatatcaagaatgattttataagaaaaatttaagaatgacatggcacaataatcac 115  Q
    |||||||||||||||||||||||||||| ||  |||| ||| || ||| ||||||||||||||||||    
T  85642 ggaaaatgctagatatcaagaatgatttgat-tgaaagattaaaaaataacatggcacaataatcac 85577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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