View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10616_high_8 (Length: 309)

Name: NF10616_high_8
Description: NF10616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10616_high_8
NF10616_high_8
[»] chr1 (16 HSPs)
chr1 (110-257)||(15590370-15590515)
chr1 (51-113)||(3582846-3582908)
chr1 (51-117)||(30335632-30335698)
chr1 (51-111)||(5827673-5827733)
chr1 (113-175)||(15611903-15611965)
chr1 (70-111)||(43177766-43177807)
chr1 (50-113)||(23625241-23625304)
chr1 (71-113)||(51244007-51244049)
chr1 (113-178)||(15602457-15602522)
chr1 (71-111)||(8779657-8779697)
chr1 (71-111)||(14395915-14395955)
chr1 (71-111)||(35615399-35615439)
chr1 (71-113)||(14884761-14884803)
chr1 (71-113)||(23740230-23740272)
chr1 (53-109)||(6704111-6704167)
chr1 (61-113)||(44573797-44573849)
[»] chr2 (7 HSPs)
chr2 (51-115)||(11511839-11511903)
chr2 (51-111)||(20683482-20683542)
chr2 (51-111)||(43302431-43302491)
chr2 (70-110)||(32414680-32414720)
chr2 (65-114)||(39446008-39446057)
chr2 (51-111)||(7772716-7772776)
chr2 (51-83)||(45154449-45154481)
[»] chr3 (11 HSPs)
chr3 (51-114)||(38138147-38138210)
chr3 (70-111)||(50346083-50346124)
chr3 (50-113)||(31153317-31153380)
chr3 (51-111)||(51309645-51309705)
chr3 (71-109)||(4489617-4489655)
chr3 (51-113)||(24744340-24744402)
chr3 (70-111)||(21084658-21084699)
chr3 (55-116)||(25926321-25926382)
chr3 (71-108)||(47968201-47968238)
chr3 (51-111)||(3433032-3433092)
chr3 (71-111)||(14464951-14464991)
[»] chr8 (10 HSPs)
chr8 (53-113)||(18807126-18807186)
chr8 (51-113)||(14728839-14728901)
chr8 (51-113)||(29416749-29416811)
chr8 (51-111)||(10288172-10288232)
chr8 (65-111)||(41123424-41123470)
chr8 (70-110)||(26705698-26705738)
chr8 (71-111)||(30905482-30905522)
chr8 (51-113)||(13628958-13629020)
chr8 (51-113)||(13729370-13729432)
chr8 (61-103)||(32953307-32953349)
[»] chr6 (3 HSPs)
chr6 (62-114)||(33099517-33099569)
chr6 (62-110)||(4405613-4405661)
chr6 (51-111)||(32658349-32658409)
[»] chr5 (10 HSPs)
chr5 (51-111)||(8433671-8433731)
chr5 (51-111)||(13417182-13417242)
chr5 (51-111)||(25768296-25768356)
chr5 (65-113)||(33494647-33494695)
chr5 (50-102)||(40976540-40976592)
chr5 (51-114)||(32534955-32535018)
chr5 (51-113)||(8680459-8680520)
chr5 (51-113)||(37194389-37194451)
chr5 (62-111)||(4277321-4277370)
chr5 (51-111)||(10933618-10933678)
[»] chr7 (8 HSPs)
chr7 (51-105)||(37504019-37504073)
chr7 (51-113)||(22074402-22074464)
chr7 (51-113)||(33882191-33882253)
chr7 (65-113)||(41003290-41003338)
chr7 (70-113)||(957930-957973)
chr7 (71-108)||(10248962-10248999)
chr7 (70-111)||(42710410-42710451)
chr7 (65-113)||(17603737-17603785)
[»] chr4 (9 HSPs)
chr4 (61-111)||(36219226-36219276)
chr4 (61-113)||(26417339-26417391)
chr4 (51-113)||(6076606-6076668)
chr4 (51-111)||(22424940-22425000)
chr4 (70-113)||(6077826-6077869)
chr4 (71-113)||(45064334-45064376)
chr4 (51-111)||(30599885-30599945)
chr4 (51-111)||(2129068-2129128)
chr4 (71-107)||(51676977-51677013)
[»] scaffold0110 (1 HSPs)
scaffold0110 (51-111)||(26672-26732)


Alignment Details
Target: chr1 (Bit Score: 125; Significance: 2e-64; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 110 - 257
Target Start/End: Original strand, 15590370 - 15590515
Alignment:
Q  110 ctaaccaatgatattatgccacacaatagcaatgacaatatgtaccaacgtggcattcatatattggtagtaatcagccacctcatgtccacgtaagaca 209  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15590370 ctaaccaatgatagtatgccacacaatagcaatgacaatatgtaccaacgtggcattcatatattggtagtaatcagccacctcatgtccacgtaagaca 15590469  T
Q  210 taagcatgtgtgaatttcccttaagctgagtcaagttaagaagaagta 257  Q
    ||||||    ||||||||||||||||||||||||||||||||||||||    
T  15590470 taagca--catgaatttcccttaagctgagtcaagttaagaagaagta 15590515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 3582846 - 3582908
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    ||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  3582846 atgtgtccatgtgggacatgtttaagaccttaaatatgagggtctccattgtggatgctctaa 3582908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 30335698 - 30335632
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaaccaa 117  Q
    ||||||| | |||| |||||||||||||||||||  ||||||||||||||||||||||||| |||||    
T  30335698 atgtgtcaatgtgaaacctgtttaagacctcaaagttgagggtctccattgtggatgctcttaccaa 30335632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 5827673 - 5827733
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||| |||||||| |||||| ||||||||| |||| ||||||||||||||||||||    
T  5827673 atgtgtccatgtgagacccgtttaaaacctcaaatgtgagagtctccattgtggatgctct 5827733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 15611903 - 15611965
Alignment:
Q  113 accaatgatattatgccacacaatagcaatgacaatatgtaccaacgtggcattcatatattg 175  Q
    |||||| ||| |||||||||||||| |||||||||| | ||||||||||||||||||| ||||    
T  15611903 accaataataatatgccacacaataccaatgacaatctctaccaacgtggcattcatacattg 15611965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 43177807 - 43177766
Alignment:
Q  70 gtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  43177807 gtttaagacctcaaatgtgagggtctccattgtggatgctct 43177766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 23625241 - 23625304
Alignment:
Q  50 tatgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||||| | ||| ||||  |||||||||||||| ||||| ||||||||||||||||||||||    
T  23625241 tatgtgtcaatgtgggacccatttaagacctcaaagatgagagtctccattgtggatgctctaa 23625304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 113
Target Start/End: Complemental strand, 51244049 - 51244007
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  51244049 tttaagacctcaaatatgagagtctccattgtgaatgctctaa 51244007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 178
Target Start/End: Original strand, 15602457 - 15602522
Alignment:
Q  113 accaatgatattatgccacacaatagcaatgacaatatgtaccaacgtggcattcatatattggta 178  Q
    |||||| ||| || |||||||||  |||||||||| |||| || ||||||||||||||||||||||    
T  15602457 accaattatagtacgccacacaactgcaatgacaagatgttccgacgtggcattcatatattggta 15602522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 8779697 - 8779657
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||| |||||||||||| ||||||||||||||||||||    
T  8779697 tttaagatctcaaatatgagagtctccattgtggatgctct 8779657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 14395955 - 14395915
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  14395955 tttaagacctcaaagatgagagtctccattgtggatgctct 14395915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 35615439 - 35615399
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  35615439 tttaagacctcaaagttgagggtctccattgtggatgctct 35615399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 14884761 - 14884803
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||    
T  14884761 tttaagacctcaaagatgagagtctccattgtagatgctctaa 14884803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 23740230 - 23740272
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||||||||||| ||||| |||||||||||||| |||||||    
T  23740230 tttaagacctcaaagatgagagtctccattgtggaagctctaa 23740272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 6704167 - 6704111
Alignment:
Q  53 gtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgct 109  Q
    ||||||| ||||||||  ||||||| ||||||  ||||||||||||||||| |||||    
T  6704167 gtgtccatgtgagacccatttaagatctcaaaattgagggtctccattgtgaatgct 6704111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 44573849 - 44573797
Alignment:
Q  61 gtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    ||||||||  |||||||||||||| ||||| ||| | ||||||||||||||||    
T  44573849 gtgagacccatttaagacctcaaagatgagagtcactattgtggatgctctaa 44573797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 11511903 - 11511839
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaacc 115  Q
    ||||||||| ||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  11511903 atgtgtccatgtgggacccgtttaagacctcaaatatgagtgtctccattgtggatgctctaacc 11511839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 20683482 - 20683542
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||| ||||||||||||||    
T  20683482 atgtgtccatgtgagacctatttaagacctcaaatgtgagggtctctattgtggatgctct 20683542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 43302431 - 43302491
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||| | ||| ||||||||||||||||||||  |||||||||| ||||||||||||||    
T  43302431 atgtgtcaatgtgggacctgtttaagacctcaaaattgagggtctctattgtggatgctct 43302491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 32414680 - 32414720
Alignment:
Q  70 gtttaagacctcaaatatgagggtctccattgtggatgctc 110  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  32414680 gtttaagacctcaaatttgaggatctccattgtggatgctc 32414720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 114
Target Start/End: Original strand, 39446008 - 39446057
Alignment:
Q  65 gacctgtttaagacctcaaatatgagggtctccattgtggatgctctaac 114  Q
    |||| ||||||||||||||   ||||||||||||||||||||| ||||||    
T  39446008 gacccgtttaagacctcaagattgagggtctccattgtggatgttctaac 39446057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 7772776 - 7772716
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||| |||||| | ||||||||||| |||  ||| ||||||||||||||| |||||    
T  7772776 atgtgtccatgtgagatccgtttaagaccttaaaattgaaggtctccattgtggaggctct 7772716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 83
Target Start/End: Original strand, 45154449 - 45154481
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaa 83  Q
    ||||||||| |||||||||||||||||||||||    
T  45154449 atgtgtccatgtgagacctgtttaagacctcaa 45154481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 38138210 - 38138147
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaac 114  Q
    |||||||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  38138210 atgtgtccatatgagacccgtttaagacctcaaatgtgagggtctccattgtggatgctctaac 38138147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 50346083 - 50346124
Alignment:
Q  70 gtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  50346083 gtttaagacctcaaatgtgagggtctccattgtggatgctct 50346124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 31153380 - 31153317
Alignment:
Q  50 tatgtgtccacgtgagacctgtttaagacct-caaatatgagggtctccattgtggatgctctaa 113  Q
    ||||||| || ||| |||| ||||||||||| ||||| |||||||||||||||||||||||||||    
T  31153380 tatgtgtacaggtgggacccgtttaagaccttcaaat-tgagggtctccattgtggatgctctaa 31153317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 51309645 - 51309705
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    |||||| || |||||| |||||||||||||  ||| |||||||||| ||||||||||||||    
T  51309645 atgtgtacaagtgagatctgtttaagaccttcaatttgagggtctcaattgtggatgctct 51309705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 109
Target Start/End: Original strand, 4489617 - 4489655
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgct 109  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  4489617 tttaagacctcaaagatgagagtctccattgtggatgct 4489655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 24744402 - 24744340
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||| |||||||||||| ||||||| ||| ||  | ||| |||||||||||||||||||||    
T  24744402 atgtgtacacgtgagacctatttaagaactccaaattcaggatctccattgtggatgctctaa 24744340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 21084658 - 21084699
Alignment:
Q  70 gtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    |||||||||||||||| |||| ||||||||||||||| ||||    
T  21084658 gtttaagacctcaaatgtgagagtctccattgtggatactct 21084699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 25926382 - 25926321
Alignment:
Q  55 gtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaacca 116  Q
    ||||| ||| |||| |||||||||||||||| |||||||||| |||||  ||||||| ||||    
T  25926382 gtccatgtgggacccgtttaagacctcaaatgtgagggtctcgattgtaaatgctcttacca 25926321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Original strand, 47968201 - 47968238
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgc 108  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  47968201 tttaagacctcaaagttgagggtctccattgtggatgc 47968238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 3433032 - 3433092
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    |||||| || |||||||| | |||||||||  ||| ||||| |||||||||||||||||||    
T  3433032 atgtgtacaagtgagacccgcttaagaccttcaatttgaggatctccattgtggatgctct 3433092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 14464991 - 14464951
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    |||||||||||||| ||||| |||||||| |||||||||||    
T  14464991 tttaagacctcaaagatgagagtctccatcgtggatgctct 14464951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 18807126 - 18807186
Alignment:
Q  53 gtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    ||||||| |||||||| |||||| ||||||||| |||||||||||||||||||||||||||    
T  18807126 gtgtccatgtgagacccgtttaaaacctcaaatgtgagggtctccattgtggatgctctaa 18807186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 14728901 - 14728839
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    ||||||||| ||||||||  ||||||||||||||  |||||||||||||||||||||||||||    
T  14728901 atgtgtccatgtgagacccatttaagacctcaaagttgagggtctccattgtggatgctctaa 14728839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 29416749 - 29416811
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    ||||||| | || ||||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  29416749 atgtgtctatgtaagacccgtttaagacctcaaatgtgagggtttccattgtggatgctctaa 29416811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 10288172 - 10288232
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||| |||||||| |||||||||||||||| |||||||||  ||||| ||||||||    
T  10288172 atgtgtccatgtgagacccgtttaagacctcaaatgtgagggtctttattgtagatgctct 10288232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 111
Target Start/End: Original strand, 41123424 - 41123470
Alignment:
Q  65 gacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||    
T  41123424 gacctgtttaagacctcaaatgtgatggtctccattgtgaatgctct 41123470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 26705738 - 26705698
Alignment:
Q  70 gtttaagacctcaaatatgagggtctccattgtggatgctc 110  Q
    |||||||||||||||| |||||||||||||||| |||||||    
T  26705738 gtttaagacctcaaatgtgagggtctccattgttgatgctc 26705698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 111
Target Start/End: Complemental strand, 30905522 - 30905482
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  30905522 tttaagacctcaaatttgagggtttccattgtggatgctct 30905482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 13629020 - 13628958
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||| || ||||||||  ||||||| |||||| |||  |||||||||||||||||||||||    
T  13629020 atgtgtacatgtgagacccatttaagaactcaaaaatggaggtctccattgtggatgctctaa 13628958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 13729432 - 13729370
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||| || ||||||||  ||||||| |||||| |||  |||||||||||||||||||||||    
T  13729432 atgtgtacatgtgagacccatttaagaactcaaaaatggaggtctccattgtggatgctctaa 13729370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 32953307 - 32953349
Alignment:
Q  61 gtgagacctgtttaagacctcaaatatgagggtctccattgtg 103  Q
    ||||||| ||||||||||||||||||| ||||||| |||||||    
T  32953307 gtgagacttgtttaagacctcaaatataagggtcttcattgtg 32953349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 33099569 - 33099517
Alignment:
Q  62 tgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaac 114  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||||||||    
T  33099569 tgagacccgtttaagacctcaaaattgagggtctccattgtggatgctctaac 33099517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 110
Target Start/End: Complemental strand, 4405661 - 4405613
Alignment:
Q  62 tgagacctgtttaagacctcaaatatgagggtctccattgtggatgctc 110  Q
    ||||||| ||||||||||||||||   |||||||| |||||||||||||    
T  4405661 tgagacccgtttaagacctcaaatgcaagggtctctattgtggatgctc 4405613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 32658409 - 32658349
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||||||||||||  ||||||| |  ||| ||||| ||||||| ||||||||||||    
T  32658409 atgtgtccacgtgagacccatttaagaacctaaaaatgagtgtctccactgtggatgctct 32658349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 8433731 - 8433671
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||| ||| ||||| ||||||||||||||  |||||||||||||||||||||||||    
T  8433731 atgtgtccatgtgggacctatttaagacctcaaagttgagggtctccattgtggatgctct 8433671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 13417242 - 13417182
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||| |||  ||| |||||||||||||||| ||||| |||||||||| ||||||||    
T  13417242 atgtgtccatgtggaacccgtttaagacctcaaatgtgaggatctccattgtagatgctct 13417182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 25768296 - 25768356
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||| | ||| |||| |||||||||||||||| ||||| ||||||| |||||||||||    
T  25768296 atgtgtctatgtgggacccgtttaagacctcaaatgtgaggatctccatcgtggatgctct 25768356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 33494695 - 33494647
Alignment:
Q  65 gacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||||||||||| ||||   |||||||||||||||||||||||||||    
T  33494695 gacctgtttaagacttcaagattgagggtctccattgtggatgctctaa 33494647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 40976540 - 40976592
Alignment:
Q  50 tatgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgt 102  Q
    |||||||||| |||  |||  ||||||||||||||||||||||||||||||||    
T  40976540 tatgtgtccatgtggaacccatttaagacctcaaatatgagggtctccattgt 40976592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 32534955 - 32535018
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaac 114  Q
    ||||||| | ||||||||  || ||||||||||| |||||  ||||||||||||||||||||||    
T  32534955 atgtgtcaatgtgagaccaattcaagacctcaaagatgagactctccattgtggatgctctaac 32535018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 8680520 - 8680459
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    ||||||||| |||||||| |||||||||||||||| | |  ||||||| ||||||||||||||    
T  8680520 atgtgtccatgtgagacccgtttaagacctcaaatgtaattgtctcca-tgtggatgctctaa 8680459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 37194389 - 37194451
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    ||||||| | ||||||||  ||||| |||||||| |||||  |||||||||||||||||||||    
T  37194389 atgtgtcaatgtgagacccatttaaaacctcaaagatgagaatctccattgtggatgctctaa 37194451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 4277370 - 4277321
Alignment:
Q  62 tgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    |||||||  |||||||||||||| ||||| ||||||||||| ||||||||    
T  4277370 tgagacccatttaagacctcaaagatgagagtctccattgtagatgctct 4277321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 10933618 - 10933678
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||| |||| ||| |||||||||||||||| |||| || | |||| ||||||||||    
T  10933618 atgtgtccatgtgatacccgtttaagacctcaaatgtgagagtgttcattatggatgctct 10933678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 105
Target Start/End: Original strand, 37504019 - 37504073
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtgga 105  Q
    ||||||||||||| |||| ||||||||| |||||| |||||||||||||||||||    
T  37504019 atgtgtccacgtgggacccgtttaagacttcaaatgtgagggtctccattgtgga 37504073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 22074402 - 22074464
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    ||||||||| |||||||| |||||||||||||||   |||| ||||||||||| |||||||||    
T  22074402 atgtgtccatgtgagacccgtttaagacctcaaaatagaggttctccattgtgaatgctctaa 22074464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 33882191 - 33882253
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    ||||||||| ||| || | |||||||||||||||| ||||||| |||||| ||||||||||||    
T  33882191 atgtgtccatgtgggatccgtttaagacctcaaatgtgagggtttccattatggatgctctaa 33882253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 41003338 - 41003290
Alignment:
Q  65 gacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    ||||| |||||||| ||||||||||| |||||||||||||||| |||||    
T  41003338 gacctatttaagacttcaaatatgagagtctccattgtggatgttctaa 41003290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 957973 - 957930
Alignment:
Q  70 gtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||    
T  957973 gtttaagatctcaaatgtgagggtctccattatggatgctctaa 957930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 108
Target Start/End: Complemental strand, 10248999 - 10248962
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgc 108  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  10248999 tttaagacctcaaagttgagggtctccattgtggatgc 10248962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 42710451 - 42710410
Alignment:
Q  70 gtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||||||||   |||||||||||||||||||||||||    
T  42710451 gtttaagacctcaagattgagggtctccattgtggatgctct 42710410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 113
Target Start/End: Complemental strand, 17603785 - 17603737
Alignment:
Q  65 gacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||| |||||| | ||||||  |||||||||||||||||||||||||||    
T  17603785 gacccgtttaatatctcaaaattgagggtctccattgtggatgctctaa 17603737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 111
Target Start/End: Original strand, 36219226 - 36219276
Alignment:
Q  61 gtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    |||||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  36219226 gtgagacccgtttaagacctcaaatgtgagggtctccattgtagatgctct 36219276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 113
Target Start/End: Original strand, 26417339 - 26417391
Alignment:
Q  61 gtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||||| ||||| ||| |||||||||||| |||||||||||||||||||||    
T  26417339 gtgagacccgtttatgacatcaaatatgaggatctccattgtggatgctctaa 26417391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 113
Target Start/End: Complemental strand, 6076668 - 6076606
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||| || ||| |||| |||||||||||  ||| |||||||||||||||||||||||||||    
T  6076668 atgtgtacaagtgggacccgtttaagaccttcaatttgagggtctccattgtggatgctctaa 6076606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 22425000 - 22424940
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||||| |||  |||| ||||||||||||||  ||| |||||||||||||||||||||    
T  22425000 atgtgtccatgtggaacctatttaagacctcaaagttgaaggtctccattgtggatgctct 22424940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 70 - 113
Target Start/End: Complemental strand, 6077869 - 6077826
Alignment:
Q  70 gtttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    ||||||||||||||   |||||||||||||||||||||||||||    
T  6077869 gtttaagacctcaagattgagggtctccattgtggatgctctaa 6077826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 45064334 - 45064376
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatgctctaa 113  Q
    |||||||||||||| ||| | ||||||||||||||||||||||    
T  45064334 tttaagacctcaaagatgtgagtctccattgtggatgctctaa 45064376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 30599885 - 30599945
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacc-tcaaatatgagggtctccattgtggatgctct 111  Q
    |||||| || |||||||  |||||||||| |||||| |||||||||||||||||||||||||    
T  30599885 atgtgtacaagtgagactcgtttaagaccttcaaat-tgagggtctccattgtggatgctct 30599945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 2129068 - 2129128
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||| | ||| ||||| |||||||||||||| ||||| |||| |||||| ||||||||    
T  2129068 atgtgtcaatgtgggacctctttaagacctcaaagatgagagtcttcattgtagatgctct 2129128  T

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Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 51676977 - 51677013
Alignment:
Q  71 tttaagacctcaaatatgagggtctccattgtggatg 107  Q
    ||||||||||||||  |||||||||||||||||||||    
T  51676977 tttaagacctcaaagttgagggtctccattgtggatg 51677013  T

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Target: scaffold0110 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 26732 - 26672
Alignment:
Q  51 atgtgtccacgtgagacctgtttaagacctcaaatatgagggtctccattgtggatgctct 111  Q
    ||||||| | |||||| || |||||| ||||||| ||||| ||||||||||| ||||||||    
T  26732 atgtgtcaatgtgagatctatttaaggcctcaaagatgagagtctccattgtagatgctct 26672  T

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