View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10616_low_25 (Length: 223)
Name: NF10616_low_25
Description: NF10616
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10616_low_25 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 16 - 205
Target Start/End: Original strand, 47813460 - 47813649
Alignment:
| Q |
16 |
atgaagtgaagaacttttggcatacacatttgaagaaaaaggtgcaaaaaagtgaagtgtacaatgtcaatacctcttattcatatactttggatgaggc |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47813460 |
atgaagtgaagaacttttggcatacacatttgaagaaaaaggtgcaaaaaagtgaagtgtacaatgtcaatacctcttattcatatactttggatgaggc |
47813559 |
T |
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| Q |
116 |
acaagcaagtgatggttatagtagtgtcggtgaaaaaagagttatttccaattatggtttagtctcaagcaaggatccaaacactgtagg |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47813560 |
acaagcaagtgatggttatagtagtgtcggtgaaaaaagagttatttccaattatggtttagtctcaagcaaggatccaaacactgtagg |
47813649 |
T |
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