View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10618_low_13 (Length: 265)

Name: NF10618_low_13
Description: NF10618
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10618_low_13
NF10618_low_13
[»] chr2 (48 HSPs)
chr2 (1-253)||(18789254-18789499)
chr2 (41-93)||(17736787-17736839)
chr2 (41-91)||(10109661-10109711)
chr2 (48-93)||(7201501-7201546)
chr2 (48-93)||(43424653-43424698)
chr2 (53-92)||(19967413-19967452)
chr2 (43-93)||(346141-346191)
chr2 (47-93)||(3752796-3752842)
chr2 (51-93)||(27906245-27906286)
chr2 (48-94)||(31582179-31582225)
chr2 (48-90)||(32887356-32887398)
chr2 (43-92)||(3196555-3196604)
chr2 (48-93)||(23718929-23718974)
chr2 (48-93)||(24106601-24106646)
chr2 (48-93)||(33063980-33064025)
chr2 (48-93)||(40365428-40365473)
chr2 (41-93)||(9517024-9517076)
chr2 (48-100)||(36193966-36194018)
chr2 (43-90)||(37132997-37133044)
chr2 (48-95)||(41187479-41187526)
chr2 (43-93)||(5028850-5028900)
chr2 (48-94)||(9383231-9383277)
chr2 (48-94)||(9842224-9842270)
chr2 (70-100)||(10735875-10735905)
chr2 (47-93)||(21929465-21929510)
chr2 (47-93)||(22558971-22559017)
chr2 (43-93)||(29798534-29798584)
chr2 (53-95)||(44526120-44526162)
chr2 (48-93)||(1861831-1861876)
chr2 (43-92)||(4226988-4227037)
chr2 (48-93)||(11551162-11551207)
chr2 (48-93)||(16221368-16221413)
chr2 (49-94)||(17328029-17328074)
chr2 (48-89)||(24305327-24305368)
chr2 (48-93)||(27244651-27244696)
chr2 (48-93)||(29133506-29133551)
chr2 (48-89)||(39688254-39688295)
chr2 (48-93)||(42475132-42475177)
chr2 (48-93)||(42791289-42791334)
chr2 (43-95)||(6765602-6765654)
chr2 (41-89)||(7262804-7262852)
chr2 (48-92)||(10195684-10195728)
chr2 (48-92)||(10332297-10332341)
chr2 (41-93)||(17413347-17413399)
chr2 (53-89)||(34685991-34686027)
chr2 (53-89)||(34708412-34708448)
chr2 (48-92)||(40546311-40546355)
chr2 (48-88)||(41778966-41779006)
[»] scaffold0012 (1 HSPs)
scaffold0012 (43-93)||(118813-118863)
[»] chr4 (50 HSPs)
chr4 (40-93)||(9913893-9913946)
chr4 (48-94)||(39171392-39171438)
chr4 (40-93)||(4916149-4916202)
chr4 (48-93)||(35287529-35287574)
chr4 (48-93)||(43374294-43374339)
chr4 (48-95)||(9539215-9539262)
chr4 (44-95)||(36059020-36059071)
chr4 (48-93)||(9946421-9946466)
chr4 (48-89)||(12698595-12698636)
chr4 (48-93)||(35021489-35021534)
chr4 (48-93)||(54859731-54859776)
chr4 (48-93)||(56565005-56565050)
chr4 (41-85)||(9221960-9222004)
chr4 (48-92)||(12502309-12502353)
chr4 (41-93)||(32430138-32430190)
chr4 (41-89)||(35151455-35151503)
chr4 (41-77)||(51847973-51848009)
chr4 (57-96)||(16877241-16877280)
chr4 (48-94)||(1756968-1757014)
chr4 (40-94)||(2932116-2932170)
chr4 (43-93)||(11198758-11198808)
chr4 (41-95)||(12588855-12588909)
chr4 (43-93)||(14202496-14202546)
chr4 (41-95)||(16432972-16433026)
chr4 (48-90)||(23154591-23154633)
chr4 (43-93)||(30780123-30780173)
chr4 (40-90)||(41402217-41402267)
chr4 (48-93)||(241406-241451)
chr4 (48-93)||(2186355-2186400)
chr4 (48-93)||(8020669-8020714)
chr4 (48-93)||(10303533-10303578)
chr4 (48-93)||(10401418-10401463)
chr4 (47-92)||(11949684-11949729)
chr4 (40-89)||(12757310-12757359)
chr4 (48-93)||(15849228-15849273)
chr4 (48-93)||(19479499-19479544)
chr4 (48-93)||(19588148-19588193)
chr4 (48-93)||(32180824-32180869)
chr4 (48-93)||(36203230-36203275)
chr4 (48-93)||(39606589-39606633)
chr4 (40-93)||(50774567-50774620)
chr4 (48-93)||(52270052-52270097)
chr4 (48-93)||(53468593-53468638)
chr4 (48-93)||(54857637-54857682)
chr4 (48-89)||(55421591-55421632)
chr4 (43-95)||(2448141-2448193)
chr4 (53-93)||(19935188-19935228)
chr4 (48-96)||(23809940-23809988)
chr4 (43-95)||(32923247-32923299)
chr4 (48-92)||(52132324-52132368)
[»] chr5 (41 HSPs)
chr5 (41-92)||(22619869-22619920)
chr5 (44-94)||(40730213-40730263)
chr5 (43-93)||(10199013-10199063)
chr5 (43-93)||(24498578-24498628)
chr5 (48-98)||(35270703-35270753)
chr5 (48-94)||(42613226-42613272)
chr5 (45-98)||(3630648-3630701)
chr5 (48-93)||(5551303-5551348)
chr5 (52-93)||(7336341-7336382)
chr5 (48-93)||(8410467-8410512)
chr5 (48-93)||(8543570-8543615)
chr5 (40-89)||(9584597-9584646)
chr5 (44-93)||(22585646-22585695)
chr5 (48-93)||(28207126-28207171)
chr5 (48-93)||(34191427-34191472)
chr5 (48-93)||(42473888-42473933)
chr5 (48-95)||(10704353-10704400)
chr5 (41-88)||(22394034-22394081)
chr5 (48-95)||(40715971-40716018)
chr5 (47-93)||(14880406-14880452)
chr5 (48-94)||(18589889-18589935)
chr5 (40-86)||(20718969-20719015)
chr5 (47-89)||(30488923-30488965)
chr5 (43-93)||(32559298-32559348)
chr5 (48-90)||(39610363-39610405)
chr5 (48-93)||(2839792-2839837)
chr5 (48-93)||(10359619-10359664)
chr5 (48-93)||(11637594-11637639)
chr5 (43-92)||(16193102-16193151)
chr5 (48-93)||(17708068-17708113)
chr5 (52-93)||(18041297-18041338)
chr5 (48-93)||(24408489-24408534)
chr5 (48-93)||(27721697-27721742)
chr5 (48-93)||(32858664-32858709)
chr5 (48-93)||(37932324-37932369)
chr5 (40-88)||(4040401-4040449)
chr5 (53-93)||(12165232-12165272)
chr5 (49-97)||(17426208-17426256)
chr5 (40-92)||(20175720-20175772)
chr5 (48-96)||(24485690-24485738)
chr5 (47-95)||(27174819-27174867)
[»] scaffold0460 (1 HSPs)
scaffold0460 (47-93)||(1247-1293)
[»] chr7 (44 HSPs)
chr7 (40-94)||(5526718-5526772)
chr7 (48-89)||(44819515-44819556)
chr7 (48-93)||(46207754-46207799)
chr7 (48-93)||(47589575-47589620)
chr7 (48-94)||(18378395-18378441)
chr7 (48-93)||(6023303-6023348)
chr7 (48-89)||(7670432-7670473)
chr7 (48-93)||(10025988-10026033)
chr7 (48-93)||(13955474-13955519)
chr7 (48-93)||(19416508-19416553)
chr7 (48-93)||(27993051-27993096)
chr7 (48-93)||(35103490-35103535)
chr7 (48-93)||(35142171-35142216)
chr7 (48-93)||(41132438-41132483)
chr7 (48-93)||(47677599-47677644)
chr7 (48-95)||(40808181-40808228)
chr7 (43-90)||(48069854-48069901)
chr7 (48-94)||(580948-580994)
chr7 (48-90)||(5458093-5458135)
chr7 (48-94)||(10244720-10244766)
chr7 (48-94)||(21993175-21993221)
chr7 (51-93)||(30781446-30781488)
chr7 (43-93)||(34448627-34448677)
chr7 (47-93)||(36341086-36341132)
chr7 (51-93)||(38728202-38728244)
chr7 (48-94)||(39801699-39801745)
chr7 (43-93)||(43539121-43539171)
chr7 (47-93)||(48980481-48980527)
chr7 (48-93)||(1079714-1079759)
chr7 (52-93)||(4491142-4491183)
chr7 (48-93)||(4905270-4905315)
chr7 (48-93)||(19626547-19626592)
chr7 (48-93)||(23198771-23198816)
chr7 (48-85)||(24027081-24027118)
chr7 (42-95)||(26825413-26825466)
chr7 (48-93)||(46737779-46737824)
chr7 (48-93)||(47342671-47342716)
chr7 (48-93)||(48103696-48103741)
chr7 (41-93)||(964756-964808)
chr7 (40-92)||(2622320-2622372)
chr7 (43-95)||(3536271-3536323)
chr7 (57-93)||(14786117-14786153)
chr7 (53-93)||(20243249-20243289)
chr7 (47-87)||(30467981-30468021)
[»] chr1 (48 HSPs)
chr1 (43-93)||(13590104-13590154)
chr1 (47-93)||(41032925-41032971)
chr1 (48-93)||(13673539-13673584)
chr1 (52-93)||(20481094-20481135)
chr1 (48-93)||(26834514-26834559)
chr1 (48-96)||(23334579-23334627)
chr1 (47-89)||(7550894-7550936)
chr1 (51-93)||(39452454-39452496)
chr1 (43-92)||(2613717-2613766)
chr1 (48-93)||(9527991-9528036)
chr1 (48-93)||(16826348-16826393)
chr1 (48-93)||(23524818-23524863)
chr1 (48-93)||(44860905-44860950)
chr1 (48-93)||(48681955-48682000)
chr1 (41-93)||(27853349-27853401)
chr1 (41-93)||(43840340-43840392)
chr1 (48-95)||(7158765-7158812)
chr1 (48-95)||(15668490-15668537)
chr1 (48-95)||(25086475-25086522)
chr1 (43-93)||(4770645-4770695)
chr1 (48-86)||(23203323-23203361)
chr1 (55-93)||(26755610-26755648)
chr1 (47-93)||(35308179-35308225)
chr1 (48-94)||(42888568-42888614)
chr1 (48-94)||(44641520-44641566)
chr1 (43-89)||(45701326-45701372)
chr1 (43-93)||(49843428-49843478)
chr1 (41-94)||(2884463-2884516)
chr1 (47-92)||(3157738-3157783)
chr1 (48-93)||(7732416-7732461)
chr1 (48-93)||(20371836-20371881)
chr1 (52-93)||(21965918-21965959)
chr1 (48-93)||(27449467-27449512)
chr1 (43-88)||(32433112-32433157)
chr1 (48-93)||(41769837-41769882)
chr1 (48-93)||(42045394-42045439)
chr1 (48-93)||(48100716-48100761)
chr1 (48-89)||(50595905-50595946)
chr1 (43-92)||(51127907-51127956)
chr1 (52-92)||(8551454-8551493)
chr1 (43-87)||(10841900-10841944)
chr1 (48-88)||(14520943-14520983)
chr1 (43-87)||(16475671-16475715)
chr1 (43-87)||(17917155-17917199)
chr1 (53-93)||(24752675-24752715)
chr1 (43-95)||(35632891-35632943)
chr1 (48-92)||(47340782-47340826)
chr1 (48-92)||(50040351-50040395)
[»] scaffold0009 (1 HSPs)
scaffold0009 (43-88)||(17724-17769)
[»] scaffold0006 (3 HSPs)
scaffold0006 (48-93)||(171153-171198)
scaffold0006 (43-93)||(208936-208986)
scaffold0006 (48-89)||(223699-223740)
[»] chr8 (40 HSPs)
chr8 (48-93)||(39433404-39433449)
chr8 (48-96)||(6314345-6314393)
chr8 (45-95)||(18148821-18148871)
chr8 (48-94)||(33105384-33105430)
chr8 (48-93)||(14975885-14975930)
chr8 (45-90)||(16907576-16907621)
chr8 (48-93)||(24023437-24023482)
chr8 (41-90)||(26885653-26885702)
chr8 (48-93)||(27718916-27718961)
chr8 (40-93)||(32232391-32232444)
chr8 (48-92)||(5728533-5728577)
chr8 (53-93)||(31085891-31085931)
chr8 (48-95)||(37750021-37750068)
chr8 (40-91)||(44665763-44665814)
chr8 (43-89)||(1644690-1644736)
chr8 (48-94)||(2554234-2554280)
chr8 (43-93)||(16340320-16340370)
chr8 (47-93)||(33445564-33445610)
chr8 (43-93)||(39139015-39139065)
chr8 (48-94)||(44084293-44084339)
chr8 (48-89)||(1764976-1765017)
chr8 (48-93)||(5325529-5325574)
chr8 (48-93)||(8137929-8137974)
chr8 (48-89)||(8461858-8461899)
chr8 (52-93)||(15310316-15310357)
chr8 (52-93)||(15490685-15490726)
chr8 (48-93)||(18147450-18147495)
chr8 (48-93)||(18638094-18638139)
chr8 (48-93)||(29499765-29499810)
chr8 (52-93)||(30551066-30551107)
chr8 (52-93)||(34997452-34997493)
chr8 (48-93)||(38763537-38763582)
chr8 (48-93)||(40316850-40316895)
chr8 (48-93)||(42367723-42367768)
chr8 (52-93)||(44215815-44215856)
chr8 (41-94)||(44293568-44293621)
chr8 (48-96)||(17693264-17693312)
chr8 (53-93)||(19163563-19163603)
chr8 (53-93)||(22775622-22775662)
chr8 (53-89)||(35103104-35103140)
[»] chr3 (35 HSPs)
chr3 (48-93)||(32843284-32843329)
chr3 (48-92)||(20370303-20370347)
chr3 (48-93)||(4332689-4332734)
chr3 (48-93)||(21506780-21506825)
chr3 (48-93)||(22722396-22722441)
chr3 (48-93)||(28244126-28244171)
chr3 (40-93)||(39481135-39481188)
chr3 (48-93)||(44579630-44579675)
chr3 (48-93)||(53162192-53162237)
chr3 (46-94)||(2496548-2496596)
chr3 (48-92)||(25340946-25340990)
chr3 (48-91)||(52575943-52575986)
chr3 (43-93)||(3612199-3612249)
chr3 (48-90)||(14827522-14827564)
chr3 (48-90)||(20612299-20612341)
chr3 (48-90)||(43490439-43490481)
chr3 (48-94)||(48796240-48796286)
chr3 (43-89)||(49088750-49088796)
chr3 (48-93)||(3100215-3100260)
chr3 (48-93)||(7868716-7868761)
chr3 (48-93)||(9856127-9856172)
chr3 (48-93)||(10498717-10498762)
chr3 (52-93)||(10617547-10617588)
chr3 (48-93)||(20537876-20537921)
chr3 (48-93)||(21331439-21331484)
chr3 (48-93)||(21628910-21628955)
chr3 (48-97)||(29631176-29631225)
chr3 (44-77)||(29817980-29818013)
chr3 (48-93)||(32629074-32629119)
chr3 (48-89)||(32836171-32836212)
chr3 (48-93)||(33745093-33745138)
chr3 (52-93)||(36170116-36170157)
chr3 (48-89)||(51379801-51379842)
chr3 (52-93)||(54796148-54796189)
chr3 (53-93)||(47040921-47040961)
[»] chr6 (32 HSPs)
chr6 (47-90)||(9581963-9582006)
chr6 (48-95)||(13496108-13496155)
chr6 (40-93)||(2445293-2445346)
chr6 (48-93)||(4494893-4494938)
chr6 (48-93)||(9444951-9444996)
chr6 (48-93)||(9677229-9677274)
chr6 (43-84)||(24827055-24827096)
chr6 (40-89)||(25934807-25934856)
chr6 (48-96)||(24167912-24167960)
chr6 (48-94)||(9392690-9392736)
chr6 (43-93)||(12204363-12204413)
chr6 (43-93)||(12329270-12329320)
chr6 (47-89)||(14350947-14350989)
chr6 (48-94)||(18256876-18256922)
chr6 (48-90)||(33938701-33938743)
chr6 (52-93)||(3054026-3054067)
chr6 (48-93)||(9111041-9111086)
chr6 (48-93)||(12256471-12256515)
chr6 (48-93)||(12333590-12333635)
chr6 (48-93)||(12735265-12735310)
chr6 (43-96)||(16890465-16890518)
chr6 (48-89)||(17935727-17935768)
chr6 (52-93)||(18313927-18313968)
chr6 (48-89)||(20847533-20847574)
chr6 (48-93)||(21296752-21296797)
chr6 (48-89)||(26320585-26320626)
chr6 (48-93)||(32053782-32053827)
chr6 (41-93)||(1030277-1030329)
chr6 (48-92)||(2931373-2931417)
chr6 (48-88)||(12904339-12904379)
chr6 (48-92)||(20744133-20744177)
chr6 (48-92)||(28951394-28951438)
[»] scaffold0160 (1 HSPs)
scaffold0160 (48-93)||(22905-22950)
[»] scaffold0011 (2 HSPs)
scaffold0011 (48-93)||(185257-185302)
scaffold0011 (48-94)||(223151-223197)
[»] scaffold0157 (1 HSPs)
scaffold0157 (48-92)||(18124-18168)
[»] scaffold0135 (1 HSPs)
scaffold0135 (41-85)||(32613-32657)
[»] scaffold0098 (1 HSPs)
scaffold0098 (48-95)||(5417-5464)
[»] scaffold0735 (1 HSPs)
scaffold0735 (48-94)||(1521-1567)
[»] scaffold0154 (1 HSPs)
scaffold0154 (48-90)||(37532-37574)
[»] scaffold0016 (1 HSPs)
scaffold0016 (43-93)||(204584-204634)
[»] scaffold0007 (1 HSPs)
scaffold0007 (51-89)||(244477-244515)
[»] scaffold0069 (1 HSPs)
scaffold0069 (48-93)||(50990-51035)
[»] scaffold0062 (1 HSPs)
scaffold0062 (41-90)||(7471-7520)
[»] scaffold0031 (1 HSPs)
scaffold0031 (48-89)||(47263-47304)


Alignment Details
Target: chr2 (Bit Score: 173; Significance: 4e-93; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 18789499 - 18789254
Alignment:
Q  1 tattatatcgaaataaaagtttatgaatgaaattttcttaatcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggacttaatct 100  Q
    ||||||||||||||||||||  |||||||||||||||||||||||  |||| ||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  18789499 tattatatcgaaataaaagt--atgaatgaaattttcttaatcttgcatatattatgcattgtccaaaccaactgagttaagctcacgaggacttaatct 18789402  T
Q  101 tgtaacttaaaaataccctaaagcaaaaactttaaaatttataggaactcatatgctaaaagaaaacatgctctggcgaaaaaacaggcgatttgtcgct 200  Q
    |||||||||||||   ||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||  |    
T  18789401 tgtaacttaaaaa---cctaaagcaaaaactttaaaattaataggaactcat--gctaaaagaaaacatgctctggcgaaaaaacgggcgatttgtcatt 18789307  T
Q  201 gttcacatatcaaattcgttttagctttcttcttcctaaggtaacccctgttc 253  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18789306 gttcacttatcaaattcgttttagctttcttcttcctaaggtaacccctgttc 18789254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 17736839 - 17736787
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  17736839 atcttacatattttatgcattgttcataccaactgagctaagctcacgaggac 17736787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 10109661 - 10109711
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 91  Q
    |||||| |||||||||||||||| |||| ||||||||||||||||||||||    
T  10109661 atcttacatattttatgcattgtccaaaccaactgagctaagctcacgagg 10109711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 7201546 - 7201501
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||    
T  7201546 atatattatgcattgttcaaaccaactgagctaagctcacgaggac 7201501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 43424698 - 43424653
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||    
T  43424698 atattttatgcattgttccaatcaactgagctaagctcatgaggac 43424653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 19967452 - 19967413
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  19967452 ttatgcattgttcatatcaactgagctaagctcacgagga 19967413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 346141 - 346191
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||| ||||||||| |||||| ||||||||||||||||||||||||    
T  346141 cttacatatattatgcattattcaaaccaactgagctaagctcacgaggac 346191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 3752796 - 3752842
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||||||| | |||| |||||||||||||||||||    
T  3752796 tatattttatgcattgttcataacaaccgagctaagctcacgaggac 3752842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 93
Target Start/End: Original strand, 27906245 - 27906286
Alignment:
Q  51 ttttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  27906245 ttttatgcattgttcaa-tcaactgagctaagctcacgaggac 27906286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 31582225 - 31582179
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||||    
T  31582225 atattctatgcattgttcaaaccaactgagctaagctcacgtggact 31582179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 32887398 - 32887356
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  32887398 atattttatgtattgttccaatcaactgagctaagctcacgag 32887356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 3196604 - 3196555
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||| |||| |||||||||||||| ||||||||||| |||||||||||||    
T  3196604 cttacatatattatgcattgttcatatcaactgagcaaagctcacgagga 3196555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 23718974 - 23718929
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||    
T  23718974 atattttatgcgttgttcaaatcaactgagctaaactcacgtggac 23718929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 24106646 - 24106601
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||| |||||||||||||||||||||| |||||| ||||    
T  24106646 atattttatgcgttgttcaaatcaactgagctaaactcacgtggac 24106601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 33064025 - 33063980
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||    
T  33064025 atatattatgcattgtccatatcaactgagctaagctcacgaggac 33063980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 40365428 - 40365473
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  40365428 atattttatgcattgtacataccaactgagctaagctcacgaggac 40365473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 9517024 - 9517076
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||| ||||| |||||||||||||| | |||||||||||| |||||||||||    
T  9517024 atcttgtatatattatgcattgttcataccaactgagctaatctcacgaggac 9517076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 36193966 - 36194018
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggacttaatct 100  Q
    ||||||||||||||||||||| |||||||| |||  |||||||||| ||||||    
T  36193966 atattttatgcattgttcaaaccaactgaggtaacatcacgaggacataatct 36194018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 37132997 - 37133044
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||| |||||||||||||||| | || |||||||||||||||||||||    
T  37132997 cttacatattttatgcattgtcccaaccaactgagctaagctcacgag 37133044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 41187479 - 41187526
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||||||||||||||| || | ||||| ||||||||||||||||||||    
T  41187479 atattttatgcattgtccataccaactaagctaagctcacgaggactt 41187526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 5028900 - 5028850
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||| ||||||||||| | ||||||||||||||||||||| |||||    
T  5028900 cttacatatattatgcattgtcctaatcaactgagctaagctcaccaggac 5028850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 9383231 - 9383277
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||| ||||||||||| || | |||||||||||||||||||||||||    
T  9383231 atatattatgcattgtccataccaactgagctaagctcacgaggact 9383277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 9842224 - 9842270
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||||||||| |  | |||||||||||||||||||||||||    
T  9842224 atattttatgcattgtccctaccaactgagctaagctcacgaggact 9842270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 100
Target Start/End: Original strand, 10735875 - 10735905
Alignment:
Q  70 caactgagctaagctcacgaggacttaatct 100  Q
    |||||||||||||||||||||||||||||||    
T  10735875 caactgagctaagctcacgaggacttaatct 10735905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 21929510 - 21929465
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||    
T  21929510 tatattttatgcattgtccaac-caactgagctaagctcacgaggac 21929465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 22559017 - 22558971
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||| |||| |||||||| ||| |||||||||||    
T  22559017 tatattttatgcattgtccaaaccaactgagttaaactcacgaggac 22558971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 29798534 - 29798584
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||||| || | |||||||| |||||||||||||||    
T  29798534 cttaaatattttatgcattgtccataccaactgagttaagctcacgaggac 29798584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 44526162 - 44526120
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    ||||||||||| || | ||||||||||||||||||||||||||    
T  44526162 ttatgcattgtccataccaactgagctaagctcacgaggactt 44526120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 1861831 - 1861876
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || |||| |||||||||||||||||||||    
T  1861831 atatattatgcattgtccatatcagctgagctaagctcacgaggac 1861876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 4226988 - 4227037
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||| |||||||||||||||||| || ||| |||| ||||||||||||||    
T  4226988 cttacatattttatgcattgttccaaccaattgagttaagctcacgagga 4227037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 11551207 - 11551162
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||  ||||||||| |||||||||||| |||||    
T  11551207 atattttatgcattgtcgaaatcaactaagctaagctcacaaggac 11551162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 16221368 - 16221413
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| | |||||||||||| |||| ||||||    
T  16221368 atattttatgcattgttcataccaactgagctaaactcatgaggac 16221413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 17328029 - 17328074
Alignment:
Q  49 tattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    ||||||||||||||| | || | |||||||||||||||||||||||    
T  17328029 tattttatgcattgtcccaaccgactgagctaagctcacgaggact 17328074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 24305327 - 24305368
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||||| || || |||||||||||||||||||    
T  24305327 atattttatgcattgtccatattaactgagctaagctcacga 24305368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 27244696 - 27244651
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| |  ||||||||||||||||||||||||||    
T  27244696 atatattatgcattgtccctatcaactgagctaagctcacgaggac 27244651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 29133506 - 29133551
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| | |||||||||||| || ||||||||    
T  29133506 atattttatgcattgttcataccaactgagctaaacttacgaggac 29133551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 39688295 - 39688254
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||    
T  39688295 atattttattcattgttcaaatcaactaagctaagttcacga 39688254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 42475132 - 42475177
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||| | | |||||||| |||||||||||||||    
T  42475132 atattttatgcattgtttataccaactgagttaagctcacgaggac 42475177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 42791334 - 42791289
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| ||| |||| ||||||||||||||||||||    
T  42791334 atatattatgcattgtccaagtcaagtgagctaagctcacgaggac 42791289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 6765654 - 6765602
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||| |||||||||||||||| || | ||||||||||||||| || |||||||    
T  6765654 cttacatattttatgcattgtccataccaactgagctaagcttacaaggactt 6765602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 7262852 - 7262804
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||| ||||| ||||||||||| || ||||||||||||||| ||||||    
T  7262852 atcttgtatatattatgcattgtccatatcaactgagctaaggtcacga 7262804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 10195684 - 10195728
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||| ||||||||| | || |||||||||||||||||||||||||    
T  10195684 atatattatgcattatccatatcaactgagctaagctcacgagga 10195728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 10332297 - 10332341
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||    
T  10332297 atatattatgcattgtccttatcaactgagctaagctcacgagga 10332341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 17413347 - 17413399
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||| |||||||||||||| ||| || |||||||| ||| |||||||||||    
T  17413347 atcttacatattttatgcattattccaaccaactgagttaaactcacgaggac 17413399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 34685991 - 34686027
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  34685991 ttatgcattgtccaaaccaactgagctaagctcacga 34686027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 89
Target Start/End: Original strand, 34708412 - 34708448
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  34708412 ttatgcattgtccaaaccaactgagctaagctcacga 34708448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 40546355 - 40546311
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||| |||||||||||||  || ||||||||||||||||||||||    
T  40546355 atatattatgcattgttcttattaactgagctaagctcacgagga 40546311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 41778966 - 41779006
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacg 88  Q
    |||| ||||||||||| |||||||||||||||| |||||||    
T  41778966 atatattatgcattgtccaaatcaactgagctatgctcacg 41779006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 118863 - 118813
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  118863 cttacatattttatgcattgttcaaaccaactgagctaagctcacgaggac 118813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 9913946 - 9913893
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  9913946 aatcttgtatattttatgcattgttcataccaactgagctaagctcacgaggac 9913893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 39171392 - 39171438
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||||||||| || |||||||||||||||||||||||||||    
T  39171392 atattttatgcattgtccatatcaactgagctaagctcacgaggact 39171438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 4916202 - 4916149
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||| |||| |||||||||||||||| ||||||||||||| ||||||||||    
T  4916202 aatcttacatatattatgcattgttcaaaccaactgagctaagttcacgaggac 4916149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 35287529 - 35287574
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  35287529 atattttatgcattgttcataccaactgagctaagctcacgaggac 35287574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 43374294 - 43374339
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || ||||||||||||||||||||||||||    
T  43374294 atattttatgcattgtccatatcaactgagctaagctcacgaggac 43374339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 9539215 - 9539262
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||||||||||||||| || | ||||||||||||||||||||||||||    
T  9539215 atattttatgcattgtccataacaactgagctaagctcacgaggactt 9539262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 95
Target Start/End: Complemental strand, 36059071 - 36059020
Alignment:
Q  44 ttatatattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||| |||||||||||||||||| | ||||||||||||| ||||||||||||    
T  36059071 ttatgtattttatgcattgttcataccaactgagctaagttcacgaggactt 36059020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 9946466 - 9946421
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  9946466 atattttatgcattgtccataccaactgagctaagctcacgaggac 9946421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 12698636 - 12698595
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  12698636 atatattatgcattgtccaaatcaactgagctaagctcacga 12698595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 35021489 - 35021534
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||| ||||| || ||||||||||||||||||||||||||    
T  35021489 atattttatgtattgtccatatcaactgagctaagctcacgaggac 35021534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 54859731 - 54859776
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||    
T  54859731 atatattatgcattgttcaaaccaaccgagctaagctcacgaggac 54859776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 56565005 - 56565050
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || ||||| ||||||||||||||||||||    
T  56565005 atattttatgcattgtccatatcaattgagctaagctcacgaggac 56565050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 9222004 - 9221960
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctc 85  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||    
T  9222004 atcttacatatattatgcattgttcaaaccaactgagctaagctc 9221960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 12502309 - 12502353
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    ||||||| |||||||| |||||||||||||||||||| |||||||    
T  12502309 atattttctgcattgtccaaatcaactgagctaagctgacgagga 12502353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 32430138 - 32430190
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||| |||||||||||||||||||| |  ||||||| |||||||||||||||    
T  32430138 atcttgtatattttatgcattgttcatactaactgagttaagctcacgaggac 32430190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 35151503 - 35151455
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||||||||||||| | || |||||||||||| ||||||    
T  35151503 atcttatatattttatgcattgtttatataaactgagctaagttcacga 35151455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 51848009 - 51847973
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgag 77  Q
    ||||| |||||||||||||||||||||||||||||||    
T  51848009 atcttgtatattttatgcattgttcaaatcaactgag 51847973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 96
Target Start/End: Complemental strand, 16877280 - 16877241
Alignment:
Q  57 gcattgttcaaatcaactgagctaagctcacgaggactta 96  Q
    ||||||| | ||||||||||||||||||||||||||||||    
T  16877280 gcattgtcccaatcaactgagctaagctcacgaggactta 16877241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 1757014 - 1756968
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||||||||| | ||| ||||||| ||||||||||||||||    
T  1757014 atattttatgcattgtcccaatgaactgagttaagctcacgaggact 1756968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 2932170 - 2932116
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    ||||||| |||| ||||||||||| |  |||||| ||||||||||||||||||||    
T  2932170 aatcttacatatattatgcattgtccctatcaacagagctaagctcacgaggact 2932116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 11198808 - 11198758
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||| | || | ||||||||||||||||||||||||    
T  11198808 cttacatattttatgcattctccataccaactgagctaagctcacgaggac 11198758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 12588855 - 12588909
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    ||||||||||||||||| |||||||| | |||||||| ||||  |||||||||||    
T  12588855 atcttatatattttatgtattgttcataccaactgagttaagaccacgaggactt 12588909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 14202496 - 14202546
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||| ||||||||| | ||||||||||||| |||||||||||||||    
T  14202496 cttacatatattatgcattatccaaatcaactgagttaagctcacgaggac 14202546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 16432972 - 16433026
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    ||||||||||| |||||||||||  |  ||| |||||||||||||||||||||||    
T  16432972 atcttatatatattatgcattgtctatgtcagctgagctaagctcacgaggactt 16433026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 23154633 - 23154591
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||||||||||||||||  || |||||||||||||||||||||    
T  23154633 atattttatgcattgtttcaaccaactgagctaagctcacgag 23154591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 30780173 - 30780123
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||||| || | |||||||| |||||||||| ||||    
T  30780173 cttatatattttatgcattgtccataccaactgagttaagctcacgtggac 30780123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 41402267 - 41402217
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||||| ||||||||||||||||||  ||||||||||  ||||||||||||    
T  41402267 aatcttgtatattttatgcattgttttaatcaactgacttaagctcacgag 41402217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 241406 - 241451
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| | |||| |||||||||| ||||||||    
T  241406 atattttatgcattgttcataccaaccgagctaagcttacgaggac 241451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 2186355 - 2186400
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || | ||||||||||||||||||||||||    
T  2186355 atatattatgcattgtccataccaactgagctaagctcacgaggac 2186400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 8020669 - 8020714
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| |||| ||||||||||| ||||||||||||    
T  8020669 atatattatgcattgtccaaaccaactgagctatgctcacgaggac 8020714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 10303533 - 10303578
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| |  | ||||||||||||||||||||||||    
T  10303533 atattttatgcattgtccttaccaactgagctaagctcacgaggac 10303578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 10401418 - 10401463
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  10401418 atattgtatgcattgttcataccaactgaactaagctcacgaggac 10401463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 11949684 - 11949729
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    ||||| ||||| |||||||  |||||||||||||||||||||||||    
T  11949684 tatatattatgtattgttcttatcaactgagctaagctcacgagga 11949729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 12757310 - 12757359
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||||| |||||||||||||||| | ||| ||||||| |||||||||||    
T  12757310 aatcttacatattttatgcattgtcctaatgaactgagttaagctcacga 12757359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 15849273 - 15849228
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||| | || | ||||||||||||||||||||||||    
T  15849273 atattttatgcattatccataccaactgagctaagctcacgaggac 15849228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 19479499 - 19479544
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||| || ||||||||||||||||| |||||    
T  19479499 atatattatgcattgttcatattaactgagctaagctcacaaggac 19479544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 19588193 - 19588148
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||    
T  19588193 atattttatgcattgtccataccaattgagctaagctcacgaggac 19588148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 32180869 - 32180824
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||  | | ||||||||||||||||||||||||    
T  32180869 atattttatgcattgtctataccaactgagctaagctcacgaggac 32180824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 36203275 - 36203230
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| |  ||||||||||||||||||||||||||    
T  36203275 atatattatgcattgtccttatcaactgagctaagctcacgaggac 36203230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 39606589 - 39606633
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||    
T  39606589 atattttatacattgttcaac-caactgagctaagctcacgaggac 39606633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 50774620 - 50774567
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||| ||||||||||| |||||| | | ||| ||||||||||||||||||||    
T  50774620 aatcttgtatattttatgtattgtttataccaattgagctaagctcacgaggac 50774567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 52270052 - 52270097
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || | ||||||||||||||||||||||||    
T  52270052 atatattatgcattgtccataccaactgagctaagctcacgaggac 52270097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 53468593 - 53468638
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| | ||| ||||||| ||||||||||||    
T  53468593 atattttatgcattgttcataccaattgagctatgctcacgaggac 53468638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 54857637 - 54857682
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||| | | |||| |||||||||||||||||||    
T  54857637 atattttatgcattgtttataccaaccgagctaagctcacgaggac 54857682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 55421591 - 55421632
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||| ||||||||||| |||| ||||||||||||||||||||    
T  55421591 atatattatgcattgtccaaaccaactgagctaagctcacga 55421632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 2448193 - 2448141
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||| |||||||||| |||||||| | ||||||| ||||| ||||||||||||    
T  2448193 cttacatattttatgtattgttcataccaactgaactaagttcacgaggactt 2448141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 19935188 - 19935228
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||  |||||||||||||| |||||||||||    
T  19935188 ttatgcattgttcttatcaactgagctaaactcacgaggac 19935228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 23809988 - 23809940
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactta 96  Q
    |||| |||||| |||| || | |||||||||||||||||||||||||||    
T  23809988 atatattatgctttgtccataccaactgagctaagctcacgaggactta 23809940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 32923247 - 32923299
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||| |||| |||||||||||||| | |||||||| |||||||||||| ||||    
T  32923247 cttacatatattatgcattgttcataccaactgagttaagctcacgagaactt 32923299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 52132324 - 52132368
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||| ||||||||||| |||| ||||||||||| |||||||||||    
T  52132324 atatattatgcattgtccaaaccaactgagctatgctcacgagga 52132368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 22619920 - 22619869
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||||||||    
T  22619920 atcttgtatattttatgcattgttcataccaactgagctaagctcacgagga 22619869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 94
Target Start/End: Original strand, 40730213 - 40730263
Alignment:
Q  44 ttatatattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||| |||||||||||||| ||||||| |||||||||||||||||||    
T  40730213 ttatatatattatgcattgttcatatcaacttagctaagctcacgaggact 40730263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 10199063 - 10199013
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||| ||||||||||| || | ||||||||||||||||||||||||    
T  10199063 cttatatatattatgcattgtccataccaactgagctaagctcacgaggac 10199013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 24498628 - 24498578
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||| |||| |||||||||| |||||||||||||||    
T  24498628 cttacatattttatgcattattcatatcaactgagttaagctcacgaggac 24498578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 35270703 - 35270753
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggacttaat 98  Q
    |||||||||||||||| | || |||||||||||||||||||||||| ||||    
T  35270703 atattttatgcattgtcccaaccaactgagctaagctcacgaggacataat 35270753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 42613226 - 42613272
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||||||||| |||||||| ||| |||||||||||||||||    
T  42613226 atattttatgcattgtccaaatcaattgaactaagctcacgaggact 42613272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 3630701 - 3630648
Alignment:
Q  45 tatatattttatgcattgttcaaatcaactgagctaagctcacgaggacttaat 98  Q
    ||||||||||||  ||||||| || |||||||||||||||||||||||| ||||    
T  3630701 tatatattttatatattgttccaaccaactgagctaagctcacgaggacctaat 3630648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 5551303 - 5551348
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||||| || ||||||||||||||||| ||||||    
T  5551303 atattttatgcattgttccaaccaactgagctaagctcatgaggac 5551348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 7336341 - 7336382
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  7336341 tttatgcattgttcctatcaactgagctaagctcacgaggac 7336382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 8410467 - 8410512
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||    
T  8410467 atattttatgcattgttcacactaactgagctaagctcacgaggac 8410512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 8543615 - 8543570
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||    
T  8543615 atattttatgcattgtccaaaccaactgagttaagctcacgaggac 8543570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 9584646 - 9584597
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||||| |||||||||||||||||| ||||||||||| ||| |||||||    
T  9584646 aatcttacatattttatgcattgttccaatcaactgagttaaactcacga 9584597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 22585695 - 22585646
Alignment:
Q  44 ttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||| |||||||||||||| |||||||||| ||||| |||||||||    
T  22585695 ttatatatattatgcattgttcatatcaactgagttaagcccacgaggac 22585646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 28207171 - 28207126
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  28207171 atattttatgcattgtccataccaactgagctaagctcacgaggac 28207126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 34191472 - 34191427
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| | || ||||||||||||||||||||||||    
T  34191472 atattttatgcattgtcccaaccaactgagctaagctcacgaggac 34191427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 42473933 - 42473888
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||    
T  42473933 atatattatgcattgttccaatcaattgagctaagctcacgaggac 42473888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 10704353 - 10704400
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||||||||||||||| || | |||||||||||||||||| |||||||    
T  10704353 atattttatgcattgtccataccaactgagctaagctcacaaggactt 10704400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 22394081 - 22394034
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacg 88  Q
    |||||| |||| ||||||||||| || |||||||||||||||||||||    
T  22394081 atcttacatatattatgcattgtccatatcaactgagctaagctcacg 22394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 40715971 - 40716018
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||| ||||||||||| || ||||| ||||||||||||||||||||||    
T  40715971 atatattatgcattgtccatatcaattgagctaagctcacgaggactt 40716018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 14880452 - 14880406
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||| ||||||||||| | |||||||| |||||||||||||||    
T  14880452 tatattttctgcattgttcataccaactgagttaagctcacgaggac 14880406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 18589889 - 18589935
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||| |||||||||||||| | |||||||| ||||||||||||||||    
T  18589889 atatattatgcattgttcataccaactgagttaagctcacgaggact 18589935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 20718969 - 20719015
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctca 86  Q
    |||||||| ||| |||||||||||  |||||||||||||||||||||    
T  20718969 aatcttatgtatattatgcattgtctaaatcaactgagctaagctca 20719015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 30488965 - 30488923
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||| |||||||||||||| ||||||||| ||||||||||||    
T  30488965 tatatattatgcattgttcatatcaactgaactaagctcacga 30488923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 32559348 - 32559298
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||||||||  | ||||| ||||||||||||||||||||    
T  32559348 cttacatattttatgcattgtcaatatcaattgagctaagctcacgaggac 32559298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 39610363 - 39610405
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||| ||||||||||| || |||||||||||||||||||||||    
T  39610363 atatattatgcattgtccatatcaactgagctaagctcacgag 39610405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 2839837 - 2839792
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||| | |||| ||||||||||||||||||||||||    
T  2839837 atatattatgcattatccaaaccaactgagctaagctcacgaggac 2839792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 10359619 - 10359664
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||| |||||||||||| | ||||||||||||| ||||||||||    
T  10359619 atatttaatgcattgttcataccaactgagctaagttcacgaggac 10359664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 11637594 - 11637639
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | |||||||| |||||||||||||||    
T  11637594 atattttatgcattgtccataccaactgagttaagctcacgaggac 11637639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 16193151 - 16193102
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||| ||||||||||||||||||| | ||||||| |||| ||||||||||    
T  16193151 cttacatattttatgcattgttcataccaactgaactaaactcacgagga 16193102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 17708113 - 17708068
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || |||||||||| || ||||||||||||    
T  17708113 atattttatgcattgtccatatcaactgagttatgctcacgaggac 17708068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 18041297 - 18041338
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||  ||||| ||||||||||||||||||||    
T  18041297 tttatgcattgttcctatcaattgagctaagctcacgaggac 18041338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 24408534 - 24408489
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||| || |||| ||||||||||||||||||||||||    
T  24408534 atatattatgcatcgtccaaaccaactgagctaagctcacgaggac 24408489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 27721697 - 27721742
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||  | ||||||||||||||||||||||||    
T  27721697 atatattatgcattgttcctaccaactgagctaagctcacgaggac 27721742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 32858709 - 32858664
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | |||| |||||||||||||||||||    
T  32858709 atattttatgcattgtccataccaacggagctaagctcacgaggac 32858664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 37932369 - 37932324
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || | ||||||||||||||||||||||||    
T  37932369 atatattatgcattgtccataccaactgagctaagctcacgaggac 37932324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 4040401 - 4040449
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacg 88  Q
    |||||| ||||||||||||||||||  || ||||||| |||||||||||    
T  4040401 aatcttgtatattttatgcattgtttcaaccaactgatctaagctcacg 4040449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 12165272 - 12165232
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||| | || |||||||||||||||||||||    
T  12165272 ttatgcattgttcataccacctgagctaagctcacgaggac 12165232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 17426256 - 17426208
Alignment:
Q  49 tattttatgcattgttcaaatcaactgagctaagctcacgaggacttaa 97  Q
    ||||||| ||||| | || |||||||||||||||||||||| |||||||    
T  17426256 tattttacgcattttccatatcaactgagctaagctcacgaagacttaa 17426208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 20175772 - 20175720
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||||| ||||| |||| |||||| || | |||||||||||||||||||||||    
T  20175772 aatcttgtatatattatacattgtccataccaactgagctaagctcacgagga 20175720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 24485738 - 24485690
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactta 96  Q
    |||| ||||||||||| || | ||||| |||||||||||||||||||||    
T  24485738 atatattatgcattgtccataccaactaagctaagctcacgaggactta 24485690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 27174867 - 27174819
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    ||||||||||||||||| |    ||||||||||||||||||||||||||    
T  27174867 tatattttatgcattgtccttgccaactgagctaagctcacgaggactt 27174819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 1293 - 1247
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  1293 tatattttatgcattgttcaaaccaactaagctaagctcacgaggac 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 5526772 - 5526718
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||||| ||||||||||| || | |||||||||||||||||||||||||    
T  5526772 aatcttatatatattatgcattgtccataccaactgagctaagctcacgaggact 5526718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 44819515 - 44819556
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  44819515 atattttatgcattgttctaatcaactgagctaagctcacga 44819556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 46207799 - 46207754
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  46207799 atattttatgcattgttcataccaactgagctaagctcacgaggac 46207754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 47589575 - 47589620
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||    
T  47589575 atattttatgcattgttcataccaactgagctaagctcacgaggac 47589620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 18378441 - 18378395
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||||||||| | || |||||||||||||||||||||||||    
T  18378441 atattttatgcattgtcccaaccaactgagctaagctcacgaggact 18378395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 6023348 - 6023303
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||| ||||||| |||| ||||||||||||||||||||||||    
T  6023348 atattttaagcattgtccaaaccaactgagctaagctcacgaggac 6023303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 7670473 - 7670432
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||| |||||||||||||||| ||||||||||||||||||||    
T  7670473 atatattatgcattgttcaaaccaactgagctaagctcacga 7670432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 10026033 - 10025988
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||    
T  10026033 atattttatgcattgtccaaaccaactgagttaagctcacgaggac 10025988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 13955519 - 13955474
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||    
T  13955519 atattttatgcattgttcataccaactgagctaagctcacgcggac 13955474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 19416553 - 19416508
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  19416553 atattttatgcattgtccataccaactgagctaagctcacgaggac 19416508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 27993051 - 27993096
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||    
T  27993051 atattttatgcattgttcataccaactgagttaagctcacgaggac 27993096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 35103535 - 35103490
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| | || ||||||||||||||||||||||||    
T  35103535 atattttatgcattgtcccaaccaactgagctaagctcacgaggac 35103490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 35142171 - 35142216
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||    
T  35142171 atatattatgcattgtccatatcaactgagctaagctcacgaggac 35142216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 41132483 - 41132438
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||| |||||||||||||| ||||||||||||||| ||||    
T  41132483 atattttatgtattgttcaaatcaattgagctaagctcacgtggac 41132438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 47677599 - 47677644
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||||| || |||||||||||| |||||||||||    
T  47677599 atattttatgcattgttctaaccaactgagctaaactcacgaggac 47677644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 40808181 - 40808228
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||||||||||| ||| |||| |||||||| |||||||||||||||||    
T  40808181 atattttatgcactgtccaaaccaactgagttaagctcacgaggactt 40808228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 48069854 - 48069901
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||| |||| ||||||||||||||  ||||||||||||||||||||||    
T  48069854 cttacatatattatgcattgttcatgtcaactgagctaagctcacgag 48069901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 580948 - 580994
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||||||||| || | |||| ||||||||||||||||||||    
T  580948 atattttatgcattgtccataccaaccgagctaagctcacgaggact 580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 5458093 - 5458135
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||| |||||||||||||  |||||||||||||||||||||||    
T  5458093 atatattatgcattgttcttatcaactgagctaagctcacgag 5458135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 10244766 - 10244720
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||| ||||||||||| || | |||||||||||||||||||||||||    
T  10244766 atatattatgcattgtccataccaactgagctaagctcacgaggact 10244720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 21993221 - 21993175
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||||||||| || | |||||||| ||||||||||||||||    
T  21993221 atattttatgcattgtccataccaactgagttaagctcacgaggact 21993175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 30781488 - 30781446
Alignment:
Q  51 ttttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||  | ||||||||||||||||||||||||||    
T  30781488 ttttatgcattgtctatatcaactgagctaagctcacgaggac 30781446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 34448627 - 34448677
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||| ||||||||||| |||| |||||||| |||||||||||||||    
T  34448627 cttacatatattatgcattgtccaaaccaactgagttaagctcacgaggac 34448677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 36341086 - 36341132
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||||||| | |||||||| |||||||| ||||||    
T  36341086 tatattttatgcattgttcataccaactgagttaagctcaagaggac 36341132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 38728244 - 38728202
Alignment:
Q  51 ttttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||| || | ||||||||||||||||||||||||    
T  38728244 ttttatgcattgtccataccaactgagctaagctcacgaggac 38728202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 39801745 - 39801699
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||| ||||||||||| || | |||||||||||||||||||||||||    
T  39801745 atatattatgcattgtccataccaactgagctaagctcacgaggact 39801699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 43539121 - 43539171
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||| |||||||||||||  |||||||||||||||||||| |||||    
T  43539121 cttacatatattatgcattgttcctatcaactgagctaagctcacaaggac 43539171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 48980527 - 48980481
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||| ||||||||||| || | ||||||||||||||||||||||||    
T  48980527 tatatattatgcattgtccataccaactgagctaagctcacgaggac 48980481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 1079714 - 1079759
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||||| ||  ||||||| |||||||||||||||    
T  1079714 atattttatgcattgttccaactaactgagttaagctcacgaggac 1079759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 4491142 - 4491183
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||   ||||||||||||||||||||||||||    
T  4491142 tttatgcattgttactatcaactgagctaagctcacgaggac 4491183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 4905315 - 4905270
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | |||||||| |||||||||||||||    
T  4905315 atattttatgcattgtccacaacaactgagttaagctcacgaggac 4905270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 19626547 - 19626592
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| |||| |||||||| |||||||||||||||    
T  19626547 atatattatgcattgtccaaaccaactgagttaagctcacgaggac 19626592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 23198771 - 23198816
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| | |||||||| ||| |||||||||||    
T  23198771 atattttatgcattgttcataccaactgagttaaactcacgaggac 23198816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 24027081 - 24027118
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctc 85  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  24027081 atattttatgcattgttccaatcaactaagctaagctc 24027118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 26825413 - 26825466
Alignment:
Q  42 tcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    ||||| |||| ||||||||||| || ||||| |||| |||||||||||||||||    
T  26825413 tcttaaatatattatgcattgtccatatcaattgaggtaagctcacgaggactt 26825466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 46737824 - 46737779
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| ||||  |||||||||||||||||||||||    
T  46737824 atatattatgcattgtccaaacaaactgagctaagctcacgaggac 46737779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 47342716 - 47342671
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||| ||||||||||    
T  47342716 atattttatgcattgtccataccaactgagctaagttcacgaggac 47342671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 48103696 - 48103741
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| | || |||||||| |||||||||||||||    
T  48103696 atattttatgcattgtcccaaccaactgagttaagctcacgaggac 48103741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 964756 - 964808
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||| ||||||||||||   ||| |||||| |||||||||||||||    
T  964756 atcttatatatattatgcattgtttctatcgactgagttaagctcacgaggac 964808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 2622372 - 2622320
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    ||||||| |||| ||||| |||||||  ||||||| |||||||||||||||||    
T  2622372 aatcttacatatattatgtattgttcctatcaactaagctaagctcacgagga 2622320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 3536271 - 3536323
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||| |||| ||||||||||||| || |||||||||| |||||||||| ||||    
T  3536271 cttacatatattatgcattgttccaaccaactgagcttagctcacgagaactt 3536323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 14786153 - 14786117
Alignment:
Q  57 gcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||| | ||||||||||||||||||||||||    
T  14786153 gcattgttcataccaactgagctaagctcacgaggac 14786117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 20243289 - 20243249
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||| || | ||||||||||||||||||||||||    
T  20243289 ttatgcattgtccataccaactgagctaagctcacgaggac 20243249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 30468021 - 30467981
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcac 87  Q
    ||||| |||||||||||||||| |||||||| |||||||||    
T  30468021 tatatattatgcattgttcaaaccaactgagttaagctcac 30467981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 13590154 - 13590104
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||||||||    
T  13590154 cttacatattttatgcattgtccaaaccaactgagctaagctcacgaggac 13590104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 41032971 - 41032925
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||    
T  41032971 tatattttatgcattgttcatatcaactgagttaagctcacgaggac 41032925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 13673584 - 13673539
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||    
T  13673584 atattttatgcattgttcaaaccaaccgagctaagctcacgaggac 13673539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 20481135 - 20481094
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  20481135 tttatgcattgttcaaaccaactgagctaagctcacgaggac 20481094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 26834559 - 26834514
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  26834559 atattttatgcatcgttcatatcaactgagctaagctcacgaggac 26834514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 23334627 - 23334579
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactta 96  Q
    |||||||||||||||| ||||||| ||||| ||||||||||||||||||    
T  23334627 atattttatgcattgtccaaatcagctgagttaagctcacgaggactta 23334579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 7550936 - 7550894
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||||||||| |||||||||| |||||||||||    
T  7550936 tatattttatgcattgttcatatcaactgagttaagctcacga 7550894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 39452496 - 39452454
Alignment:
Q  51 ttttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| | ||||||||||||||||||||||||    
T  39452496 ttttatgcattgttcataccaactgagctaagctcacgaggac 39452454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 2613766 - 2613717
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||| |||||||||||||||| || | |||||||||||||||||||||||    
T  2613766 cttacatattttatgcattgtccataccaactgagctaagctcacgagga 2613717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 9528036 - 9527991
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||| |||||||||||||| | ||||||||||||||||||    
T  9528036 atattttatgtattgttcaaatcaatttagctaagctcacgaggac 9527991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 16826393 - 16826348
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  16826393 atattttatgcattgtccatagcaactgagctaagctcacgaggac 16826348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 23524863 - 23524818
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||    
T  23524863 atattttatgcattgttccaatcaactgagttaagctcacaaggac 23524818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 44860905 - 44860950
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  44860905 atattttatgcattgtccaaaccaactgagctaagttcacgaggac 44860950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 48681955 - 48682000
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||| | ||||||||||||||||||||||||    
T  48681955 atatattatgcattgttcataccaactgagctaagctcacgaggac 48682000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 27853401 - 27853349
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||| ||||| |||||||||||||| | |||||||| |||||||||||||||    
T  27853401 atcttgtatatattatgcattgttcataccaactgagttaagctcacgaggac 27853349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 43840340 - 43840392
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||| |||||||||||||||| || |||||||||| ||| |||||||||||    
T  43840340 atcttacatattttatgcattgtccatatcaactgagttaaactcacgaggac 43840392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 7158812 - 7158765
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||||||||||||||| || |||||||| ||||| |||||||||||||    
T  7158812 atattttatgcattgtccatatcaactgggctaaactcacgaggactt 7158765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 15668537 - 15668490
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||||||||||||||||| || |||||||| |||| ||||||||||||    
T  15668537 atattttatgcattgttccaaccaactgagttaagatcacgaggactt 15668490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 25086522 - 25086475
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||||||||||||||| || | |||||||||||||||||| |||||||    
T  25086522 atattttatgcattgtccataccaactgagctaagctcacaaggactt 25086475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 4770645 - 4770695
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||| | |||||||||||| |||||||||| ||||||||| |||||    
T  4770645 cttatatatatcatgcattgttcatatcaactgagttaagctcacaaggac 4770695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Complemental strand, 23203361 - 23203323
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctca 86  Q
    |||||||||||||||||| || |||||||||||||||||    
T  23203361 atattttatgcattgttccaaccaactgagctaagctca 23203323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 26755648 - 26755610
Alignment:
Q  55 atgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  26755648 atgcattgtccatatcaactgagctaagctcacgaggac 26755610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 35308225 - 35308179
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||| |||||||||||||| | ||||||| ||||||||||||||||    
T  35308225 tatatattatgcattgttcataccaactgaactaagctcacgaggac 35308179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 42888614 - 42888568
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||||||||| || | ||||||||||||||||||| |||||    
T  42888614 atattttatgcattgtccataccaactgagctaagctcacgtggact 42888568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 44641566 - 44641520
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||| ||||||||||| || |||||||||||||| ||||||||||||    
T  44641566 atatattatgcattgtccatatcaactgagctaaactcacgaggact 44641520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 45701372 - 45701326
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||| ||||||||||||||||||| | |||||||||||| |||||||    
T  45701372 cttacatattttatgcattgttcataccaactgagctaaactcacga 45701326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 49843478 - 49843428
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||| |||||||||||||||| ||| |||| |||||||||||||||    
T  49843478 cttacatatattatgcattgttcaaaccaattgagttaagctcacgaggac 49843428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 2884463 - 2884516
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    ||||| ||||| ||||||||||| || |||||||||| |||| |||||||||||    
T  2884463 atcttgtatatattatgcattgtccatatcaactgagttaaggtcacgaggact 2884516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 3157738 - 3157783
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    ||||| ||||||||||||||||  || |||||||||||||||||||    
T  3157738 tatatattatgcattgttcaaactaattgagctaagctcacgagga 3157783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 7732461 - 7732416
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||| | ||||||||||||||||| |||||||||||    
T  7732461 atatattatgcattatccaaatcaactgagctaaactcacgaggac 7732416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 20371881 - 20371836
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||||| |||| ||| ||||||||| |||||    
T  20371881 atattttatgcattgttcaaaccaacggagttaagctcacaaggac 20371836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 21965918 - 21965959
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||| |||| |||||||||||||||||||| |||||    
T  21965918 tttatgcattattcatatcaactgagctaagctcacaaggac 21965959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 27449467 - 27449512
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || || |||||||||||||||||||||||    
T  27449467 atatattatgcattgtccatattaactgagctaagctcacgaggac 27449512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 32433112 - 32433157
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacg 88  Q
    ||||||||||||||||||| |||| ||| |||||| ||||||||||    
T  32433112 cttatatattttatgcatttttcatatcgactgagttaagctcacg 32433157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 41769837 - 41769882
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||| | |||| ||||||||||||||||||||||||    
T  41769837 atatattatgcattatccaaaccaactgagctaagctcacgaggac 41769882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 42045394 - 42045439
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || | ||||||||||||||||||||||||    
T  42045394 atatattatgcattgtccataccaactgagctaagctcacgaggac 42045439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 48100761 - 48100716
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | |||||||||||||||||| |||||    
T  48100761 atattttatgcattgtccataccaactgagctaagctcacaaggac 48100716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 50595905 - 50595946
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||||||||||||||||| | ||| ||||||||||||||||    
T  50595905 atattttatgcattgttcataccaattgagctaagctcacga 50595946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 51127907 - 51127956
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    ||||||||| ||||||||||| || || ||||||||||| ||||||||||    
T  51127907 cttatatatattatgcattgtccatattaactgagctaaactcacgagga 51127956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 8551454 - 8551493
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  8551454 tttatgcattgtccaa-tcaactgagctaagctcacgagga 8551493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 10841944 - 10841900
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcac 87  Q
    ||||||||| ||||||||||| || |||||||||| |||||||||    
T  10841944 cttatatatattatgcattgtccatatcaactgagttaagctcac 10841900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 14520983 - 14520943
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacg 88  Q
    |||||||||||||||| || | |||||||||||||||||||    
T  14520983 atattttatgcattgtccataccaactgagctaagctcacg 14520943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 16475671 - 16475715
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcac 87  Q
    |||| |||||||||||||||| | ||||||||||| |||||||||    
T  16475671 cttacatattttatgcattgtcctaatcaactgaggtaagctcac 16475715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 17917155 - 17917199
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcac 87  Q
    |||| |||||||||||||||| || |||||||||||||| |||||    
T  17917155 cttacatattttatgcattgtccatatcaactgagctaaactcac 17917199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 24752675 - 24752715
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||| || | ||||||||||||||||||||||||    
T  24752675 ttatgcattgtccataccaactgagctaagctcacgaggac 24752715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 35632943 - 35632891
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    ||||||||| ||||||||||| || |||||||||  |||||| ||||||||||    
T  35632943 cttatatatattatgcattgtccatatcaactgaaataagctaacgaggactt 35632891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 47340826 - 47340782
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||||||||||||||| | || |||||||||||||||||| ||||    
T  47340826 atattttatgcattgtcccaaccaactgagctaagctcacaagga 47340782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 50040395 - 50040351
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||||||||||||||| | || ||||||||||||| |||||||||    
T  50040395 atattttatgcattgtcccaaccaactgagctaagttcacgagga 50040351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 17769 - 17724
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacg 88  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  17769 cttatatatattatgcattgtccaaatcaactgagctaagctcacg 17724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 171198 - 171153
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||    
T  171198 atattttatgcattgttcaaaccaaccgagctaagctcacgaggac 171153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 208986 - 208936
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||  ||||||||||| |||| ||||||||||||||||||||||||    
T  208986 cttatatacattatgcattgtccaaaccaactgagctaagctcacgaggac 208936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 223699 - 223740
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||| ||||||||||||||||  |||||||||||||||||||    
T  223699 atatattatgcattgttcaaactaactgagctaagctcacga 223740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 39433449 - 39433404
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||    
T  39433449 atattttatgtattgttcatatcaactgagctaagctcacgaggac 39433404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 6314345 - 6314393
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactta 96  Q
    |||||||||||||||| |  |||||||||||||||||||||||||||||    
T  6314345 atattttatgcattgtccttatcaactgagctaagctcacgaggactta 6314393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 18148821 - 18148871
Alignment:
Q  45 tatatattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    ||||||| |||||||||||||| || ||||||| |||||||||||||||||    
T  18148821 tatatatattatgcattgttcatattaactgagttaagctcacgaggactt 18148871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 33105430 - 33105384
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||| |||||||||||||||| || ||||||||||||||||||||||    
T  33105430 atatattatgcattgttcaaaccagctgagctaagctcacgaggact 33105384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 14975885 - 14975930
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||| |||||| | ||||||||||||||||||||||||    
T  14975885 atattttatgcactgttcataccaactgagctaagctcacgaggac 14975930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 16907621 - 16907576
Alignment:
Q  45 tatatattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||    
T  16907621 tatatatattatgcattgttcaaatcaactgagttaaactcacgag 16907576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 24023437 - 24023482
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||||| ||  |||||||||||||||||||||||    
T  24023437 atattttatgcattgttccaactaactgagctaagctcacgaggac 24023482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 26885653 - 26885702
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||||| ||||||||||||||||||| | |||||||||||| ||||||||    
T  26885653 atcttacatattttatgcattgttcataccaactgagctaaactcacgag 26885702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 27718916 - 27718961
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||    
T  27718916 atatattatgcattgtccatatcaactgagctaagctcacgaggac 27718961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 32232391 - 32232444
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||| |||||||||||||| ||||| | | ||||||||||||||||    
T  32232391 aatcttatatatattatgcattgttcatatcaattaacctaagctcacgaggac 32232444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 5728577 - 5728533
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||| |||||||||||||  |||||||||||||||||||||||||    
T  5728577 atatattatgcattgttctcatcaactgagctaagctcacgagga 5728533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 31085891 - 31085931
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  31085891 ttatacattgttcatatcaactgagctaagctcacgaggac 31085931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 37750021 - 37750068
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||| |||||||||||||| |||||||||||||| |||||||| ||||    
T  37750021 atatattatgcattgttcatatcaactgagctaaactcacgagaactt 37750068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 44665763 - 44665814
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgagg 91  Q
    |||||||||||||||| |||||||||  | ||| ||||||||||||||||||    
T  44665763 aatcttatatattttacgcattgttcgtaccaaatgagctaagctcacgagg 44665814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 1644690 - 1644736
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||| ||||||||||||||| ||| | ||||||||||||||||||||    
T  1644690 cttacatattttatgcattgctcataccaactgagctaagctcacga 1644736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 2554234 - 2554280
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||| ||||| || |||||||||||||||||||| ||||||    
T  2554234 atattttatgtattgtccatatcaactgagctaagctcacaaggact 2554280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 16340370 - 16340320
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| |||||| || ||||||| ||||||||||||||||    
T  16340370 cttacatattttatgcgttgttccaaccaactgaactaagctcacgaggac 16340320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 93
Target Start/End: Complemental strand, 33445610 - 33445564
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||| |||||||||||||  | ||||||||||||||||||||||||    
T  33445610 tatatattatgcattgttcctaccaactgagctaagctcacgaggac 33445564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 39139015 - 39139065
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||| || ||| ||||||||||||||||||| ||||    
T  39139015 cttacatattttatgcattattaaaaccaactgagctaagctcacgtggac 39139065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 44084293 - 44084339
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||| ||||||||||||| ||||||||||||| | ||||||||||||    
T  44084293 atatattatgcattgttctaatcaactgagcttaactcacgaggact 44084339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 1764976 - 1765017
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||||||||| ||||||| |||||||||| |||||||||||    
T  1764976 atattttatgcgttgttcatatcaactgagttaagctcacga 1765017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 5325529 - 5325574
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||   ||||||||||||||| |||||||||||    
T  5325529 atattttatgcattgtctcaatcaactgagctaaactcacgaggac 5325574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 8137974 - 8137929
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||||| ||||||||    
T  8137974 atattttatgcattgtccataccaactgagctaagcttacgaggac 8137929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 8461858 - 8461899
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||||| | || ||||||||||||||||||||    
T  8461858 atattttatgcattgtcccaaccaactgagctaagctcacga 8461899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 15310357 - 15310316
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||  | ||||||||||||||||||||||||||    
T  15310357 tttatgcattgtctatatcaactgagctaagctcacgaggac 15310316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 15490726 - 15490685
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||  | ||||||||||||||||||||||||||    
T  15490726 tttatgcattgtctatatcaactgagctaagctcacgaggac 15490685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 18147495 - 18147450
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| |||| ||| ||||||||||||||| ||||    
T  18147495 atattttatgcattgtccaaaccaattgagctaagctcacgtggac 18147450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 18638139 - 18638094
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||||| || ||||||||||||| |||| |||||    
T  18638139 atattttatgcattgttccaaccaactgagctaagttcactaggac 18638094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 29499810 - 29499765
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||| ||||||||||||||||||||    
T  29499810 atattttatgcattgtccataccaattgagctaagctcacgaggac 29499765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 30551066 - 30551107
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||| ||||||||||||||| |||| ||||||    
T  30551066 tttatgcattgttccaatcaactgagctaaactcatgaggac 30551107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 34997493 - 34997452
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||  | ||||||||||||||||||||||||||    
T  34997493 tttatgcattgtctatatcaactgagctaagctcacgaggac 34997452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 38763537 - 38763582
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| |||| ||||||||||| ||||||||||||    
T  38763537 atatattatgcattgtccaaaccaactgagctatgctcacgaggac 38763582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 40316895 - 40316850
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||| |||| |||||||||| |||||||||||||||    
T  40316895 atatattatgcattattcatatcaactgagataagctcacgaggac 40316850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 42367768 - 42367723
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||  ||||||||||||||||||||| ||||    
T  42367768 atatattatgcattgttcttatcaactgagctaagctcacggggac 42367723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 44215815 - 44215856
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||  |||||||||||||| |||||||||||    
T  44215815 tttatgcattgttcctatcaactgagctaaactcacgaggac 44215856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 44293621 - 44293568
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||| |||| |||||||||||  | | |||||||||||||||||||||||||    
T  44293621 atcttacatatattatgcattgtctataccaactgagctaagctcacgaggact 44293568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 17693312 - 17693264
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactta 96  Q
    ||||||||||| |||| | || |||||||| ||||||||||||||||||    
T  17693312 atattttatgcgttgtcccaaccaactgagttaagctcacgaggactta 17693264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 19163563 - 19163603
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||| || | ||||||||||||||||||||||||    
T  19163563 ttatgcattgtccataccaactgagctaagctcacgaggac 19163603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Complemental strand, 22775662 - 22775622
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||| |||| ||||| ||||||||||||||||||    
T  22775662 ttatgcattgtccaaaccaactaagctaagctcacgaggac 22775622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 35103140 - 35103104
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||| | ||||||||||||||||||||    
T  35103140 ttatgcattgttcataccaactgagctaagctcacga 35103104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 32843284 - 32843329
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||    
T  32843284 atattttatgcattgtccaaaccaactgagctaagctcacgaggac 32843329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 20370303 - 20370347
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||||||||||||||| || |||||||||||||||||||||||||    
T  20370303 atattttatgcattgtccatatcaactgagctaagctcacgagga 20370347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 4332689 - 4332734
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||| |||||| ||||||||||||||||||||||||    
T  4332689 atatattatgcattattcaaaccaactgagctaagctcacgaggac 4332734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 21506780 - 21506825
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  21506780 atattttatgcattgtccataccaactgagctaagctcacgaggac 21506825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 22722441 - 22722396
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||    
T  22722441 atattttatgcattgttcatactaactgagctaagctcacgaggac 22722396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 28244126 - 28244171
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| | |||||||| |||||||||||||||    
T  28244126 atattttatgcattgttcataccaactgagttaagctcacgaggac 28244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 39481188 - 39481135
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||| ||| |||||||||||| || | ||||||||||||||||||||||||    
T  39481188 aatcttacataatttatgcattgtccataccaactgagctaagctcacgaggac 39481135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 44579675 - 44579630
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  44579675 atattttatgcattgtccataccaactgagctaagctcacgaggac 44579630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 53162237 - 53162192
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || ||||| ||||||||||||||||||||    
T  53162237 atattttatgcattgtccatatcaattgagctaagctcacgaggac 53162192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 94
Target Start/End: Complemental strand, 2496596 - 2496548
Alignment:
Q  46 atatattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||| |||||||||||||| | ||||||| |||||||||||||||||    
T  2496596 atatatattatgcattgttcatagcaactgaactaagctcacgaggact 2496548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 25340946 - 25340990
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||||||||||||||| || | |||||||||||||||||||||||    
T  25340946 atattttatgcattgtccataccaactgagctaagctcacgagga 25340990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 91
Target Start/End: Complemental strand, 52575986 - 52575943
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagg 91  Q
    ||||||||||||||||||| | ||||||||||||||| ||||||    
T  52575986 atattttatgcattgttcataccaactgagctaagcttacgagg 52575943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 3612199 - 3612249
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||| ||||||||| | || |||||||||||||||||||| |||||    
T  3612199 cttatatatattatgcattatccatatcaactgagctaagctcacaaggac 3612249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 14827564 - 14827522
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||||||||||||||| || | |||||||||||||||||||||    
T  14827564 atattttatgcattgtccataccaactgagctaagctcacgag 14827522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 20612299 - 20612341
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||| ||||||||||||||| |||| |||||||||||||||||    
T  20612299 atatattatgcattgttcaagtcaaatgagctaagctcacgag 20612341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 43490439 - 43490481
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||| |||||||||||||| | |||||||||||||||||||||    
T  43490439 atatattatgcattgttcataccaactgagctaagctcacgag 43490481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 48796240 - 48796286
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||| ||||||||||| ||||  ||||||||||||||||||||||||    
T  48796240 atatcttatgcattgtccaaactaactgagctaagctcacgaggact 48796286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 49088796 - 49088750
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||| ||||||||||||||||| | |||||||||||||| |||||||    
T  49088796 cttacatattttatgcattgtttatatcaactgagctaaactcacga 49088750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 3100260 - 3100215
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || | ||||||||||||||||||||||||    
T  3100260 atatgttatgcattgtccacaccaactgagctaagctcacgaggac 3100215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 7868761 - 7868716
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||  | ||||||||||||||||||||||||    
T  7868761 atatattatgcattgttcttaccaactgagctaagctcacgaggac 7868716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 9856127 - 9856172
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||||| ||||| ||||| ||||||||||||    
T  9856127 atatattatgcattgttcaaaccaactaagctatgctcacgaggac 9856172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 10498717 - 10498762
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || | ||||||||||||||||||||||||    
T  10498717 atatattatgcattgtccataccaactgagctaagctcacgaggac 10498762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 10617588 - 10617547
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||| | || ||||||||||||||||||||||||||    
T  10617588 tttatgcattatccatatcaactgagctaagctcacgaggac 10617547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 20537921 - 20537876
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || |||||||||||||||||| |||||||    
T  20537921 atatattatgcattgtccatatcaactgagctaagctcgcgaggac 20537876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 21331439 - 21331484
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || | ||||||||||||||||||||||||    
T  21331439 atatattatgcattgtccataacaactgagctaagctcacgaggac 21331484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 21628910 - 21628955
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||| | |||| ||||||||||||||||||||||||    
T  21628910 atatattatgcattatccaaaccaactgagctaagctcacgaggac 21628955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 29631225 - 29631176
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggacttaa 97  Q
    |||| ||||||||||| || | ||||||||||||||||| ||||||||||    
T  29631225 atatattatgcattgtccataccaactgagctaagctcatgaggacttaa 29631176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 29817980 - 29818013
Alignment:
Q  44 ttatatattttatgcattgttcaaatcaactgag 77  Q
    ||||||||||||||||||||||| ||||||||||    
T  29817980 ttatatattttatgcattgttcatatcaactgag 29818013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 32629119 - 32629074
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||||||||| ||||    
T  32629119 atattttatgcattgtccataccaactgagctaagctcacgtggac 32629074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 32836212 - 32836171
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  32836212 atattttatgcattgtccataccaactgagctaagctcacga 32836171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 33745138 - 33745093
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || ||||| ||||||||||||||| ||||    
T  33745138 atattttatgcattgtccatatcaattgagctaagctcacggggac 33745093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 36170116 - 36170157
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||| ||||| |||| |||||||||||||||    
T  36170116 tttatgcattgttcatatcaattgagttaagctcacgaggac 36170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 51379801 - 51379842
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||||||||||||||||| |||||||||| ||| |||||||    
T  51379801 atattttatgcattgttcatatcaactgaggtaaactcacga 51379842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 54796148 - 54796189
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||  |||| |||||||||||||||||||||    
T  54796148 tttatgcattgttcctatcagctgagctaagctcacgaggac 54796189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 47040921 - 47040961
Alignment:
Q  53 ttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||| ||||||||| ||||||| ||||||||    
T  47040921 ttatgcattgttcatatcaactgaactaagcttacgaggac 47040961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 90
Target Start/End: Complemental strand, 9582006 - 9581963
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    ||||||||||||||||||| || |||||||||||||||||||||    
T  9582006 tatattttatgcattgttccaaccaactgagctaagctcacgag 9581963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 13496155 - 13496108
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||| |||||||||||||| |||||||||| |||||||||||||||||    
T  13496155 atatattatgcattgttcatatcaactgagttaagctcacgaggactt 13496108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 2445346 - 2445293
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||| ||||| |||||||||||||| |||||||||| |||||| ||||||||    
T  2445346 aatcttgtatatattatgcattgttcatatcaactgagttaagcttacgaggac 2445293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 4494893 - 4494938
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  4494893 atattttatgcattgtccataccaactgagctaagctcacgaggac 4494938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 9444996 - 9444951
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||||    
T  9444996 atattttatacattgttcataccaactgagctaagctcacgaggac 9444951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 9677274 - 9677229
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||    
T  9677274 atatattatgcattgtccaaaccaactgagctaagctcacgaggac 9677229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 24827096 - 24827055
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagct 84  Q
    ||||||||||||||||||||| || |||||||||||||||||    
T  24827096 cttatatattttatgcattgtccatatcaactgagctaagct 24827055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 25934856 - 25934807
Alignment:
Q  40 aatcttatatattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||||| |||| |||| ||||||||||||||||||| ||||||||||||    
T  25934856 aatcttacatatattattcattgttcaaatcaactgatctaagctcacga 25934807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 24167912 - 24167960
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactta 96  Q
    |||||||||||||||| |||| |||||||| ||||||||| ||||||||    
T  24167912 atattttatgcattgtacaaaccaactgagttaagctcacaaggactta 24167960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 9392690 - 9392736
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||| ||||||||| |||| | |||||||||||||||||||||||||    
T  9392690 atatattatgcatttttcataacaactgagctaagctcacgaggact 9392736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 12204413 - 12204363
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||| ||||||||||| || ||||||||||||| ||||||||||||    
T  12204413 cttacatatattatgcattgtccatatcaactgagctatgctcacgaggac 12204363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 12329320 - 12329270
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||| |||||||| | ||||||||||||||||||| ||||    
T  12329320 cttacatattttatgtattgttcataacaactgagctaagctcacggggac 12329270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 14350989 - 14350947
Alignment:
Q  47 tatattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||||||||| |||||||||| ||| |||||||    
T  14350989 tatattttatgcattgttcatatcaactgagttaaactcacga 14350947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 18256922 - 18256876
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||| ||||||||||| |  |||||||||||||||||||||||||||    
T  18256922 atatattatgcattgtccttatcaactgagctaagctcacgaggact 18256876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Original strand, 33938701 - 33938743
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||| |||||||||||||| | |||||||||||||||||||||    
T  33938701 atatattatgcattgttcataccaactgagctaagctcacgag 33938743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Original strand, 3054026 - 3054067
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||  ||||| ||||||||||||||||||||    
T  3054026 tttatgcattgttcctatcaattgagctaagctcacgaggac 3054067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 9111086 - 9111041
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||| | ||||||| ||||||||||||||||    
T  9111086 atatattatgcattgttcataccaactgaactaagctcacgaggac 9111041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 12256515 - 12256471
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||    
T  12256515 atattttatgcattattcaac-caactgagctaagctcacgaggac 12256471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 12333590 - 12333635
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || |  |||||||||||||||||||||||    
T  12333590 atattttatgcattgtccatactaactgagctaagctcacgaggac 12333635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 12735265 - 12735310
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| | || |||||||| |||||||||||||||    
T  12735265 atattttatgcattgtcccaaccaactgagttaagctcacgaggac 12735310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 16890465 - 16890518
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggactta 96  Q
    |||| |||||||||||||||| || | ||||| || ||||||||||||||||||    
T  16890465 cttacatattttatgcattgtccataccaactaagttaagctcacgaggactta 16890518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 17935768 - 17935727
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||||| |||| ||||||||||||| ||||||    
T  17935768 atattttatgcattgtccaaaccaactgagctaagttcacga 17935727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 93
Target Start/End: Complemental strand, 18313968 - 18313927
Alignment:
Q  52 tttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||  |||||||||| |||||||||||||||    
T  18313968 tttatgcattgttcctatcaactgagttaagctcacgaggac 18313927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 20847533 - 20847574
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  20847533 atattttatgcattgtccaaactaactgagctaagctcacga 20847574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 21296797 - 21296752
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| | || |||||||||||| |||||||||||    
T  21296797 atattttatgcattgtcccaaccaactgagctaaactcacgaggac 21296752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 26320585 - 26320626
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  26320585 atattttatgcattgtccataccaactgagctaagctcacga 26320626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 32053827 - 32053782
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| ||||||||||| || | ||||||||||||||||||||||||    
T  32053827 atatattatgcattgtccataccaactgagctaagctcacgaggac 32053782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 93
Target Start/End: Complemental strand, 1030329 - 1030277
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||| |||||||||||||||| | || ||| ||||||||||| ||||||||    
T  1030329 atcttacatattttatgcattgtactaaccaattgagctaagcttacgaggac 1030277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 2931373 - 2931417
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||||||||| ||| | | ||||||||||||||||||||||||||    
T  2931373 atattttatgtattctcccaatcaactgagctaagctcacgagga 2931417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 12904339 - 12904379
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacg 88  Q
    |||| |||||||||||||| |||||||||| ||||||||||    
T  12904339 atatattatgcattgttcatatcaactgaggtaagctcacg 12904379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 20744177 - 20744133
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||| ||||||||||| || | |||||||||||||||||||||||    
T  20744177 atatattatgcattgtccataccaactgagctaagctcacgagga 20744133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 28951438 - 28951394
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    |||| |||||||||||||| | |||||||| ||||||||||||||    
T  28951438 atatattatgcattgttcataccaactgagttaagctcacgagga 28951394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 22950 - 22905
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||| ||||||| | ||||||||||||||||    
T  22950 atattttatgcattgttcatatcaactaaactaagctcacgaggac 22905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 185302 - 185257
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||||||||||||||| || | ||||||||||||||||||||||||    
T  185302 atattttatgcattgtccataccaactgagctaagctcacgaggac 185257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 223197 - 223151
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||| ||||| || | |||||||||||||||||||||||||    
T  223197 atattttatgtattgtccataccaactgagctaagctcacgaggact 223151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 18168 - 18124
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgagga 92  Q
    ||||||| |||||||| |||||||||||||||||||| |||||||    
T  18168 atattttctgcattgtccaaatcaactgagctaagctgacgagga 18124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 32657 - 32613
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctc 85  Q
    |||||| |||| |||||||||||||||| ||||||||||||||||    
T  32657 atcttacatatattatgcattgttcaaaccaactgagctaagctc 32613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 5464 - 5417
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggactt 95  Q
    |||| |||||||||||||  | ||||||||||||||||||||||||||    
T  5464 atatattatgcattgttcttaccaactgagctaagctcacgaggactt 5417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 1567 - 1521
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggact 94  Q
    |||||||||||||||| || | ||||||||||||||||||| |||||    
T  1567 atattttatgcattgtccataccaactgagctaagctcacgtggact 1521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 37574 - 37532
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    ||||||||||||||||||| | ||||| |||||||||||||||    
T  37574 atattttatgcattgttcataccaacttagctaagctcacgag 37532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 93
Target Start/End: Complemental strand, 204634 - 204584
Alignment:
Q  43 cttatatattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    |||| |||||||||||||||||||   ||||||||||| ||||||||||||    
T  204634 cttacatattttatgcattgttcatgccaactgagctatgctcacgaggac 204584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 244515 - 244477
Alignment:
Q  51 ttttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    ||||||||||||| || ||||||||||||||||||||||    
T  244515 ttttatgcattgtccatatcaactgagctaagctcacga 244477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 51035 - 50990
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacgaggac 93  Q
    ||||||||||||||||||||| |||| ||| ||||||||| |||||    
T  51035 atattttatgcattgttcaaaccaacggagttaagctcacaaggac 50990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 90
Target Start/End: Complemental strand, 7520 - 7471
Alignment:
Q  41 atcttatatattttatgcattgttcaaatcaactgagctaagctcacgag 90  Q
    |||||| ||||||||||||||||||| | ||| |||| ||||||||||||    
T  7520 atcttacatattttatgcattgttcataccaattgagttaagctcacgag 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 47263 - 47304
Alignment:
Q  48 atattttatgcattgttcaaatcaactgagctaagctcacga 89  Q
    |||||||||||||||| || | ||||||||||||||||||||    
T  47263 atattttatgcattgtccataccaactgagctaagctcacga 47304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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