View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10619_low_22 (Length: 240)
Name: NF10619_low_22
Description: NF10619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10619_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 48894164 - 48894387
Alignment:
| Q |
1 |
cagtagcactaccagcaccattgttattgttcccattaaaaccagctaaattcatcatagcaccaatgtcgctagcccttttggattctccaaggttgag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48894164 |
cagtagcactaccagcaccattgttattgttcccattaaaaccagctaaattcatcatagcaccaatgtcgctagcccttttggattctccaaggttgag |
48894263 |
T |
|
| Q |
101 |
actttcattaccaaccaaatgagcattgttcaacttcatagctgccaatgttttctgatcaatcccattagcaacttccttcattaccatgttctgattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
48894264 |
actttcattaccaaccaaatgagcattgttcaacttcatagctgccaatgttttctgatcaatcccattagcaccttccttcattaccatgttctgattt |
48894363 |
T |
|
| Q |
201 |
ggatttcctttcttgccactattt |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
48894364 |
ggatttcctttcttgccactattt |
48894387 |
T |
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