View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10619_low_3 (Length: 389)
Name: NF10619_low_3
Description: NF10619
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10619_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 19 - 371
Target Start/End: Complemental strand, 1769536 - 1769184
Alignment:
| Q |
19 |
aggcaacatgaaccaattagaagcatttagtctacaaggaaacaaattcacaggaccaattcctagttcaatatctgcattgactaaagtaactcagtta |
118 |
Q |
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| T |
1769536 |
aggcagcatgaaccaattagaagcatttagtctacaagaaaacaaattcacaggaccaattcctagttcaatatctgcattgactaaattaactcagtta |
1769437 |
T |
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| Q |
119 |
aaactaggtaacaattttctcacaggaaccattccagtatcccttaaaaacctaacaaatctcacataccttagtctccaaggaaaccaacttagtggta |
218 |
Q |
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| T |
1769436 |
aaactaggtaacaattttctcacaggaaccattccagtatcccttaaaaacctaacaaatctcacataccttagtctccaaggaaaccaacttagtggta |
1769337 |
T |
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| Q |
219 |
acatacctgatattttcacttccttaaaaaaccttattattctcgaactttctcacaacaaattttccgggaatattccactttcaatttcatctctttc |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
1769336 |
acatacctgatattttcacttccttaaaaaaccttattattctccaactttctcacaacaaattttccgggaatattccactttcaatttcatctctata |
1769237 |
T |
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| Q |
319 |
tccaaccctaaggtaccttgagctagggcataattcactttccgggaaaatcc |
371 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
1769236 |
tccaaccctaaggtaccttgagctagggcacaattcactttccgggaaaatcc |
1769184 |
T |
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