View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10620_low_8 (Length: 354)
Name: NF10620_low_8
Description: NF10620
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10620_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 15 - 343
Target Start/End: Original strand, 9470362 - 9470681
Alignment:
| Q |
15 |
aaaaaatgtagtgatgttaaattttagatataggattgattgtgattgcttgatagcatnnnnnnnttacactgacaaagaattaaatttaagcagaaac |
114 |
Q |
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| T |
9470362 |
aaaaaatgtagtgatgttaaattttagatataggattgattgtgattgcttgatagcataaaaaaattacactgacaaagaattaaatttaagcagaaac |
9470461 |
T |
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| Q |
115 |
aaattctaaatcaaggaccaatttcatgttgagcttataatgtggtatacctagttgccaaagaacatccgaccatgagatattgctggttggtgcacag |
214 |
Q |
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| T |
9470462 |
aaattctaaatcaaggaccaatttcatgttgagcttataatgtggt---------tgccaaagaacatccgaccatgagatattgctggttggtgcacag |
9470552 |
T |
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| Q |
215 |
tcactttgatgaacttattgctgttgttattttctattctatcgcattgtatgagaacttttttgtctggnnnnnnnaatagcaaagtttagcacataca |
314 |
Q |
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| T |
9470553 |
tcactttgatgaacttattgctgttgttattttctattctatcgcattgtatgagaacttttttgtctggtttttttaatagcaaagtttagcacataca |
9470652 |
T |
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| Q |
315 |
tagtgtgttacattatcacttcaattctt |
343 |
Q |
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| T |
9470653 |
tagtgtgttacattatcacttcaattctt |
9470681 |
T |
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