View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10621_high_14 (Length: 217)

Name: NF10621_high_14
Description: NF10621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10621_high_14
NF10621_high_14
[»] chr4 (34 HSPs)
chr4 (1-101)||(28964186-28964293)
chr4 (1-100)||(23292925-23293031)
chr4 (5-99)||(42640547-42640643)
chr4 (5-99)||(715545-715648)
chr4 (5-99)||(752871-752974)
chr4 (6-97)||(4157168-4157266)
chr4 (6-97)||(4157455-4157553)
chr4 (1-99)||(11596297-11596397)
chr4 (1-69)||(29205458-29205533)
chr4 (1-98)||(3947702-3947811)
chr4 (1-99)||(12895055-12895161)
chr4 (5-96)||(28084540-28084640)
chr4 (51-99)||(53381530-53381578)
chr4 (1-99)||(12895214-12895319)
chr4 (1-87)||(21945517-21945610)
chr4 (45-99)||(29205533-29205587)
chr4 (1-101)||(35157923-35158030)
chr4 (1-99)||(37203278-37203371)
chr4 (60-99)||(5775304-5775343)
chr4 (1-44)||(6485613-6485656)
chr4 (56-99)||(36635406-36635449)
chr4 (1-44)||(38847014-38847057)
chr4 (56-99)||(40784029-40784072)
chr4 (1-44)||(54580025-54580068)
chr4 (45-99)||(3064868-3064922)
chr4 (6-44)||(4383386-4383424)
chr4 (6-44)||(12797340-12797378)
chr4 (53-99)||(18513175-18513221)
chr4 (53-99)||(24343586-24343632)
chr4 (5-38)||(11651142-11651175)
chr4 (53-98)||(30982808-30982853)
chr4 (51-99)||(7012149-7012197)
chr4 (53-97)||(22440559-22440603)
chr4 (6-38)||(40481655-40481687)
[»] chr1 (43 HSPs)
chr1 (1-101)||(22515825-22515932)
chr1 (1-98)||(40258874-40258978)
chr1 (1-99)||(22881567-22881661)
chr1 (5-99)||(1815275-1815376)
chr1 (1-99)||(18337343-18337448)
chr1 (1-97)||(42359391-42359494)
chr1 (1-100)||(113313-113413)
chr1 (5-99)||(51410043-51410144)
chr1 (45-103)||(18556381-18556439)
chr1 (45-107)||(47989573-47989635)
chr1 (1-101)||(46348321-46348428)
chr1 (1-99)||(1704935-1705037)
chr1 (51-99)||(21365992-21366040)
chr1 (1-97)||(1486646-1486754)
chr1 (51-102)||(16812627-16812678)
chr1 (1-44)||(24577188-24577231)
chr1 (1-99)||(37598846-37598950)
chr1 (1-99)||(38078601-38078706)
chr1 (53-99)||(9828128-9828174)
chr1 (53-99)||(40917833-40917879)
chr1 (46-99)||(5944360-5944413)
chr1 (46-99)||(31694639-31694692)
chr1 (53-97)||(16297223-16297267)
chr1 (54-102)||(38075906-38075954)
chr1 (1-44)||(6612173-6612216)
chr1 (1-100)||(18190047-18190153)
chr1 (44-99)||(22794018-22794073)
chr1 (56-99)||(22947806-22947849)
chr1 (56-99)||(27965940-27965983)
chr1 (1-44)||(28273090-28273133)
chr1 (62-101)||(35702540-35702579)
chr1 (5-44)||(47989515-47989554)
chr1 (53-99)||(6427548-6427594)
chr1 (2-44)||(21378593-21378635)
chr1 (1-31)||(23738692-23738722)
chr1 (53-99)||(29144320-29144366)
chr1 (1-39)||(31015057-31015095)
chr1 (53-99)||(46940748-46940794)
chr1 (53-95)||(48040418-48040460)
chr1 (53-99)||(52903319-52903365)
chr1 (56-97)||(25452108-25452149)
chr1 (55-99)||(36878541-36878585)
chr1 (67-99)||(48547938-48547970)
[»] chr2 (26 HSPs)
chr2 (5-97)||(2438661-2438760)
chr2 (1-103)||(18840949-18841058)
chr2 (1-99)||(37558991-37559096)
chr2 (1-100)||(38117098-38117204)
chr2 (53-99)||(37419827-37419873)
chr2 (45-101)||(15907849-15907905)
chr2 (5-92)||(21624285-21624374)
chr2 (53-99)||(26769595-26769641)
chr2 (1-39)||(30404857-30404895)
chr2 (1-39)||(30717537-30717575)
chr2 (53-102)||(15909567-15909616)
chr2 (53-98)||(44860404-44860449)
chr2 (56-99)||(11223793-11223836)
chr2 (1-44)||(11223865-11223908)
chr2 (5-44)||(19536399-19536438)
chr2 (1-40)||(21374705-21374744)
chr2 (5-44)||(33153442-33153481)
chr2 (53-99)||(34993922-34993968)
chr2 (53-99)||(42511322-42511368)
chr2 (56-101)||(18631349-18631394)
chr2 (56-97)||(19942341-19942382)
chr2 (53-94)||(23058389-23058430)
chr2 (5-38)||(24894407-24894440)
chr2 (1-45)||(14450796-14450840)
chr2 (1-37)||(37419757-37419793)
chr2 (55-99)||(44635568-44635612)
[»] chr3 (40 HSPs)
chr3 (1-99)||(20503479-20503584)
chr3 (1-99)||(55401089-55401194)
chr3 (5-99)||(40993275-40993376)
chr3 (53-102)||(34185049-34185098)
chr3 (45-99)||(49651716-49651770)
chr3 (1-97)||(25775522-25775624)
chr3 (1-97)||(28918015-28918120)
chr3 (1-100)||(3163970-3164070)
chr3 (1-99)||(10954966-10955074)
chr3 (53-97)||(24204983-24205027)
chr3 (1-44)||(10268488-10268531)
chr3 (5-44)||(14209131-14209170)
chr3 (56-99)||(14979225-14979268)
chr3 (1-100)||(51206292-51206398)
chr3 (5-99)||(11610539-11610628)
chr3 (1-39)||(26508124-26508162)
chr3 (53-99)||(27505324-27505370)
chr3 (53-99)||(40052385-40052431)
chr3 (53-102)||(4466537-4466586)
chr3 (1-38)||(4987299-4987336)
chr3 (45-101)||(5440965-5441022)
chr3 (53-97)||(4987222-4987266)
chr3 (46-98)||(8789489-8789541)
chr3 (5-45)||(55212981-55213021)
chr3 (1-44)||(1509553-1509596)
chr3 (1-44)||(8587023-8587066)
chr3 (1-44)||(14832113-14832156)
chr3 (1-95)||(33359775-33359870)
chr3 (1-44)||(34910331-34910374)
chr3 (1-44)||(49651788-49651831)
chr3 (1-39)||(21256993-21257031)
chr3 (56-98)||(34910393-34910435)
chr3 (53-99)||(41961579-41961625)
chr3 (53-98)||(15999951-15999996)
chr3 (1-38)||(25948895-25948932)
chr3 (6-39)||(35994745-35994778)
chr3 (45-105)||(3631749-3631809)
chr3 (63-99)||(4990912-4990948)
chr3 (4-44)||(8593154-8593194)
chr3 (55-99)||(11658871-11658915)
[»] chr7 (33 HSPs)
chr7 (1-99)||(5409771-5409881)
chr7 (1-101)||(40287300-40287401)
chr7 (1-99)||(21880166-21880271)
chr7 (5-99)||(15680827-15680928)
chr7 (45-99)||(24339718-24339772)
chr7 (53-101)||(6490789-6490837)
chr7 (1-99)||(9778514-9778624)
chr7 (44-100)||(17852064-17852120)
chr7 (5-99)||(21864826-21864927)
chr7 (1-44)||(24339656-24339699)
chr7 (1-99)||(33994226-33994331)
chr7 (53-99)||(598281-598327)
chr7 (1-39)||(26033468-26033506)
chr7 (53-99)||(43027404-43027450)
chr7 (1-38)||(25481916-25481953)
chr7 (53-98)||(32287404-32287449)
chr7 (53-94)||(43250077-43250118)
chr7 (1-44)||(3991338-3991381)
chr7 (1-44)||(7438720-7438763)
chr7 (1-44)||(9408336-9408379)
chr7 (5-44)||(18039017-18039056)
chr7 (5-44)||(21560521-21560560)
chr7 (53-99)||(1433532-1433578)
chr7 (45-99)||(7438782-7438836)
chr7 (53-99)||(14729776-14729822)
chr7 (53-99)||(24105751-24105797)
chr7 (53-99)||(29763129-29763175)
chr7 (53-102)||(32093951-32094001)
chr7 (55-96)||(8842282-8842323)
chr7 (45-98)||(20545185-20545238)
chr7 (66-99)||(27945104-27945137)
chr7 (5-37)||(13557750-13557782)
chr7 (63-99)||(35862034-35862070)
[»] chr5 (32 HSPs)
chr5 (1-97)||(21190998-21191101)
chr5 (1-99)||(21576685-21576790)
chr5 (1-99)||(38464313-38464409)
chr5 (1-101)||(24906250-24906346)
chr5 (1-44)||(39698555-39698598)
chr5 (1-99)||(42893374-42893479)
chr5 (51-100)||(39698623-39698672)
chr5 (1-44)||(6247636-6247679)
chr5 (1-44)||(7677719-7677762)
chr5 (1-99)||(6326253-6326342)
chr5 (57-99)||(14873599-14873641)
chr5 (53-99)||(19820328-19820374)
chr5 (61-99)||(28862379-28862417)
chr5 (5-99)||(15884006-15884096)
chr5 (48-101)||(17123116-17123168)
chr5 (47-99)||(7677783-7677835)
chr5 (5-44)||(12199948-12199987)
chr5 (1-44)||(13287401-13287444)
chr5 (1-44)||(19579715-19579758)
chr5 (61-100)||(35017124-35017163)
chr5 (53-96)||(39268541-39268584)
chr5 (1-99)||(43564895-43565000)
chr5 (1-39)||(14674283-14674321)
chr5 (45-87)||(15382550-15382592)
chr5 (53-91)||(17088364-17088402)
chr5 (45-99)||(21194063-21194117)
chr5 (1-39)||(31084337-31084375)
chr5 (1-38)||(43001814-43001851)
chr5 (63-99)||(10298633-10298669)
chr5 (4-44)||(21351907-21351947)
chr5 (63-99)||(22423764-22423800)
chr5 (57-97)||(43001882-43001922)
[»] chr6 (38 HSPs)
chr6 (1-99)||(34595148-34595253)
chr6 (1-98)||(31959173-31959268)
chr6 (6-100)||(28152117-28152218)
chr6 (1-99)||(28715309-28715414)
chr6 (1-92)||(7930319-7930413)
chr6 (1-44)||(31384934-31384977)
chr6 (1-96)||(9025448-9025539)
chr6 (5-96)||(32978842-32978940)
chr6 (1-44)||(853861-853904)
chr6 (45-104)||(10339049-10339108)
chr6 (1-44)||(10770676-10770719)
chr6 (1-44)||(12696338-12696381)
chr6 (1-44)||(16766711-16766754)
chr6 (54-101)||(34073276-34073323)
chr6 (1-98)||(17841530-17841634)
chr6 (1-99)||(4877956-4878061)
chr6 (53-100)||(7248442-7248489)
chr6 (1-44)||(7801158-7801201)
chr6 (1-44)||(7977832-7977875)
chr6 (53-96)||(8389411-8389454)
chr6 (1-44)||(9107372-9107415)
chr6 (5-44)||(9522909-9522948)
chr6 (1-44)||(16833322-16833365)
chr6 (56-99)||(17327590-17327633)
chr6 (1-39)||(1681772-1681810)
chr6 (1-39)||(2117090-2117128)
chr6 (53-99)||(7938173-7938219)
chr6 (53-99)||(8365448-8365494)
chr6 (53-99)||(8776908-8776954)
chr6 (53-99)||(9107299-9107345)
chr6 (1-101)||(13360311-13360417)
chr6 (53-99)||(16766781-16766827)
chr6 (1-34)||(5970120-5970153)
chr6 (1-38)||(8776981-8777018)
chr6 (45-98)||(31384995-31385048)
chr6 (45-97)||(5000557-5000609)
chr6 (8-44)||(9911530-9911566)
chr6 (1-41)||(17341669-17341709)
[»] chr8 (34 HSPs)
chr8 (1-99)||(8342986-8343086)
chr8 (5-99)||(18407737-18407838)
chr8 (1-96)||(40332205-40332307)
chr8 (53-97)||(44067600-44067644)
chr8 (1-44)||(4948666-4948709)
chr8 (1-95)||(5813606-5813707)
chr8 (1-44)||(8343330-8343373)
chr8 (52-99)||(15816058-15816105)
chr8 (49-100)||(17751725-17751776)
chr8 (49-100)||(17760712-17760763)
chr8 (1-44)||(25566855-25566898)
chr8 (1-99)||(36450694-36450799)
chr8 (45-99)||(6065586-6065640)
chr8 (53-99)||(13397624-13397670)
chr8 (53-99)||(22652060-22652106)
chr8 (53-99)||(29510233-29510279)
chr8 (1-97)||(20679337-20679440)
chr8 (45-101)||(11803335-11803391)
chr8 (1-44)||(2572058-2572101)
chr8 (1-99)||(14134713-14134818)
chr8 (1-44)||(20873083-20873126)
chr8 (1-44)||(22197744-22197787)
chr8 (1-44)||(30077389-30077432)
chr8 (1-44)||(30271293-30271336)
chr8 (64-98)||(3658237-3658271)
chr8 (49-99)||(4673354-4673404)
chr8 (53-99)||(8343400-8343446)
chr8 (53-99)||(13403179-13403225)
chr8 (1-39)||(41831947-41831985)
chr8 (5-38)||(41838131-41838164)
chr8 (51-99)||(11944747-11944795)
chr8 (55-99)||(13436910-13436954)
chr8 (57-101)||(16641907-16641951)
chr8 (57-97)||(16987990-16988030)
[»] scaffold0793 (1 HSPs)
scaffold0793 (5-99)||(4821-4924)
[»] scaffold0652 (1 HSPs)
scaffold0652 (1-98)||(403-507)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-44)||(20186-20229)
[»] scaffold0136 (2 HSPs)
scaffold0136 (5-44)||(3851-3890)
scaffold0136 (45-99)||(3778-3832)
[»] scaffold0450 (1 HSPs)
scaffold0450 (53-99)||(8564-8610)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-39)||(130496-130534)
[»] scaffold0007 (1 HSPs)
scaffold0007 (55-97)||(225199-225241)
[»] scaffold0003 (1 HSPs)
scaffold0003 (53-99)||(241678-241724)
[»] scaffold0103 (1 HSPs)
scaffold0103 (1-38)||(51825-51862)
[»] scaffold0004 (2 HSPs)
scaffold0004 (45-98)||(92887-92940)
scaffold0004 (1-42)||(92821-92862)
[»] scaffold0361 (1 HSPs)
scaffold0361 (1-37)||(14544-14580)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-44)||(178820-178864)
[»] scaffold0475 (1 HSPs)
scaffold0475 (56-99)||(3384-3427)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-44)||(13414-13457)
[»] scaffold0171 (1 HSPs)
scaffold0171 (5-44)||(23529-23568)
[»] scaffold0152 (1 HSPs)
scaffold0152 (1-44)||(21870-21913)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-44)||(63787-63830)
[»] scaffold0027 (2 HSPs)
scaffold0027 (1-44)||(46696-46739)
scaffold0027 (64-101)||(46741-46778)
[»] scaffold0025 (1 HSPs)
scaffold0025 (5-44)||(23788-23827)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-44)||(17751-17794)
[»] scaffold0019 (1 HSPs)
scaffold0019 (53-99)||(71809-71855)
[»] scaffold0009 (1 HSPs)
scaffold0009 (51-92)||(188471-188512)
[»] scaffold0246 (1 HSPs)
scaffold0246 (6-38)||(19594-19626)
[»] scaffold0086 (1 HSPs)
scaffold0086 (55-99)||(3014-3058)


Alignment Details
Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 28964293 - 28964186
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||       |||||||||||||||| |||||||||||||  |||||||||||| ||||    
T  28964293 tttgaaaaaatcacataattcagtgtaattacaagtgtctgtgtcggacacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgct 28964194  T
Q  94 tcatagtt 101  Q
    ||||||||    
T  28964193 tcatagtt 28964186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 23293031 - 23292925
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||       ||||| | ||||||||||||||||||||||  |||||||||||||||||    
T  23293031 tttgaaaaaatcacataattcagtataattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgct 23292932  T
Q  94 tcatagt 100  Q
    |||||||    
T  23292931 tcatagt 23292925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 42640547 - 42640643
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt--gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||| ||||||||||||| ||||  ||||| | |||| |||| ||||||||||||  |||||||| ||||||||||||||    
T  42640547 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatag 42640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 715648 - 715545
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt---------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttc 95  Q
    ||||||||||||||||||||| ||||||||||||  ||||         ||||||| |||||||| |||||||||||||  |||||||||||||||||||    
T  715648 aaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttc 715549  T
Q  96 atag 99  Q
    ||||    
T  715548 atag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 752974 - 752871
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt---------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttc 95  Q
    ||||||||||||||||||||| ||||||||||||  ||||         ||||||| |||||||| |||||||||||||  |||||||||||||||||||    
T  752974 aaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttc 752875  T
Q  96 atag 99  Q
    ||||    
T  752874 atag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 4157168 - 4157266
Alignment:
Q  6 aaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||||||||| |||||||||||||||||| ||||       ||||||| |||||||||| || || ||||| |||||||||||| |||||||||    
T  4157168 aaaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 4157455 - 4157553
Alignment:
Q  6 aaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||||||||| |||||||||||||||||| ||||       ||||||| |||||||||| || |||||||| ||||||||||||  ||||||||    
T  4157455 aaaaatcacataatttagtgcaattacaagtgtcggtgtcggacacgacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 11596397 - 11596297
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-gacaca-tatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    ||||||||||||||||||||||||| ||||||||||||  |||| |   || | ||||||| ||||||||||||||   |||||||||||||||||||||    
T  11596397 tttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcattgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcata 11596298  T
Q  99 g 99  Q
    |    
T  11596297 g 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29205458 - 29205533
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacg 69  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||       ||||||| |||||||||||||||||    
T  29205458 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtccgacaccgggacacg 29205533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 3947811 - 3947702
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt------------gacacatatccgacaccgggacacgcctaaatcgaggagtgtcc 88  Q
    |||||||||||| |||||||||||| ||||||||||||||||||            ||||| | ||||||||| |||||| |||||  ||||||||||||    
T  3947811 tttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgacacgtgtccgacaccaggacacacctaatccgaggagtgtcc 3947712  T
Q  89 gtgcttcata 98  Q
    ||||||||||    
T  3947711 gtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12895161 - 12895055
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacac-atatccgacaccgggacacgcctaaatcgaggagtgtccgtgc 92  Q
    ||||||||||||||||||||||  | ||||||||||||| ||||       ||||| | | |||||||||||| |||||||| |||| ||||||||||||    
T  12895161 tttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtcggacacgacacccgacaccgggatacgcctaattcgaagagtgtccgtgc 12895062  T
Q  93 ttcatag 99  Q
    |||||||    
T  12895061 ttcatag 12895055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 28084540 - 28084640
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt---------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttc 95  Q
    |||||||||||||||||| || ||||||||||||| ||||         ||||| | |||||||| |||||||||||||  |||||||||||||||||||    
T  28084540 aaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtcggtgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttc 28084639  T
Q  96 a 96  Q
    |    
T  28084640 a 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 53381578 - 53381530
Alignment:
Q  51 tatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||||    
T  53381578 tatccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12895319 - 12895214
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||||||||  ||| ||||| ||||||| ||||       ||||  ||||||||| ||||||||||||||  |||||||||| ||||||    
T  12895319 tttgaaaaaatcacataattttgtgtaattataagtgtcggtgtcggacacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgct 12895220  T
Q  94 tcatag 99  Q
    ||||||    
T  12895219 tcatag 12895214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 21945517 - 21945610
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtg-------tgacacatatccgacaccgggacacgcctaaatcgaggagtgtc 87  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||       |||||||| ||||||||||  ||||||||||  |||||||||||    
T  21945517 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacatgacacatgtccgacaccgcaacacgcctaatccgaggagtgtc 21945610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 29205533 - 29205587
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||| |||||||| |||||||||||||  |||||||||| ||||||||||||    
T  29205533 gacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 35158030 - 35157923
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    |||| ||||||||||||||| |||| ||||| ||||||| ||||       ||||||| ||| ||||||| |||||| |||  |||| ||||||||||||    
T  35158030 tttggaaaaatcacataatttagtgtaattataagtgtcggtgtctgacacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgct 35157931  T
Q  94 tcatagtt 101  Q
    ||||||||    
T  35157930 tcatagtt 35157923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37203278 - 37203371
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgtgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||| |||||||| |||| |||||||||||| |||||    |   ||||||||||||||||| ||||  |||| ||||||||||||||||||    
T  37203278 tttgaaaaaatgacataatttagtgtaattacaagtgt-agtgt----cgggtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcatag 37203371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 99
Target Start/End: Complemental strand, 5775343 - 5775304
Alignment:
Q  60 ccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  5775343 ccgggacacgcctaatccgaggagtgtccgtgcttcatag 5775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6485656 - 6485613
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||    
T  6485656 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 6485613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 36635406 - 36635449
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||||||  ||| |||||||||||||||||||    
T  36635406 gacaccgggacacgcctaatccgaagagtgtccgtgcttcatag 36635449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 38847057 - 38847014
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||| || |||||||| ||||||||||||||||||    
T  38847057 tttgaaaaaatcatattattcagtgtaattacaagtgtcagtgt 38847014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 40784029 - 40784072
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||| |||||  |||||||||||||||||||||||    
T  40784029 gacaccgggacacacctaatccgaggagtgtccgtgcttcatag 40784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 54580068 - 54580025
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||    
T  54580068 tttgaaaaaatcacataattcagtgtaattataagtgtcggtgt 54580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 3064922 - 3064868
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||| |||||| | | |||||||||||  |||||||||||||||||||||||    
T  3064922 gacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 4383386 - 4383424
Alignment:
Q  6 aaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||||||| |||||||||    
T  4383386 aaaaatcacataattcagtgtaattacaaatgtcagtgt 4383424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Complemental strand, 12797378 - 12797340
Alignment:
Q  6 aaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  12797378 aaaaatcacataattcagtgtaattacaagtgtcggtgt 12797340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 18513221 - 18513175
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||| ||||||||||||   ||||||||||||||||||||||    
T  18513221 tccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 24343586 - 24343632
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||||||||    ||||||||||||||||||||||    
T  24343586 tccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 11651175 - 11651142
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgt 38  Q
    |||||||||||||||||||||||| |||||||||    
T  11651175 aaaaaatcacataattcagtgcaactacaagtgt 11651142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 30982853 - 30982808
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    ||||||||||||||||||||||  | | ||||||||||||||||||    
T  30982853 tccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 7012149 - 7012197
Alignment:
Q  51 tatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||  || |||||  |||||||||||||||||||||||    
T  7012149 tatccgacaccggggaacacctaatgcgaggagtgtccgtgcttcatag 7012197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 22440603 - 22440559
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||  ||||||||||||  |||||||||||||||||||||    
T  22440603 tccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 40481655 - 40481687
Alignment:
Q  6 aaaaatcacataattcagtgcaattacaagtgt 38  Q
    |||||||||||||||||||| ||||||||||||    
T  40481655 aaaaatcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 1e-24; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 22515932 - 22515825
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||       |||||||||||||||||| |||||||||||  |||||||||||||||||    
T  22515932 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgct 22515833  T
Q  94 tcatagtt 101  Q
    ||||||||    
T  22515832 tcatagtt 22515825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 40258978 - 40258874
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||       ||||| | ||||||||| ||||||||||||  |||||||||||| ||||    
T  40258978 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcagacacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgct 40258879  T
Q  94 tcata 98  Q
    |||||    
T  40258878 tcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 22881661 - 22881567
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgtgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||   |||    ||||||||||||||| ||||  |||||||||||||||||||||||    
T  22881661 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggaca----cgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 1815275 - 1815376
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||||||||||||||| ||||||||||||| ||||       ||||||| ||||||||||||||||||||||   |||||||| ||||| |||||    
T  1815275 aaaaaatcacataattcagtgtaattacaagtgtcggtgtccgacacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcat 1815374  T
Q  98 ag 99  Q
    ||    
T  1815375 ag 1815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 18337343 - 18337448
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt--gacaca-----tatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||  ||||||     | |||||||| |||||| |||| |  |||||||||||||||||    
T  18337343 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgct 18337442  T
Q  94 tcatag 99  Q
    ||||||    
T  18337443 tcatag 18337448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 42359494 - 42359391
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgtgacaca-------tatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||   |||       | ||||||||||||||||||||||  |||||||||||||||||    
T  42359494 tttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacaagacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgct 42359395  T
Q  94 tcat 97  Q
    ||||    
T  42359394 tcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 113313 - 113413
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||||| ||||||||||||  |||| |   | | ||| ||||||||||||||||||  ||||||||| || ||||||||||    
T  113313 tttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtcgtgtccaacaccgggacacgcctaatccgaggagtgcccatgcttcatag 113412  T
Q  100 t 100  Q
    |    
T  113413 t 113413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 51410043 - 51410144
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||||||||||||||| ||||||||||||| ||||       ||||| |||||||||||| |||||||||||  | |||||| | ||||||||||    
T  51410043 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtatccgacaccgagacacgcctaatccaaggagtattcgtgcttcat 51410142  T
Q  98 ag 99  Q
    ||    
T  51410143 ag 51410144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 18556439 - 18556381
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagttgc 103  Q
    ||||| |||||||||| |||||||||||||  |||| ||||||||||||||||||||||    
T  18556439 gacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatagttgc 18556381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Original strand, 47989573 - 47989635
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagttgcatac 107  Q
    ||||||| || |||| ||||||||||||||  ||||||||||||||||||||||||| |||||    
T  47989573 gacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatagtttcatac 47989635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 46348428 - 46348321
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||| |||||| |||| ||||||||||||| ||||       ||||| | |||||||||| ||||||||| |  ||||| |||||||||||    
T  46348428 tttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgct 46348329  T
Q  94 tcatagtt 101  Q
    ||||||||    
T  46348328 tcatagtt 46348321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1705037 - 1704935
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagt---gtgac-acatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttca 96  Q
    ||||||||||||||||||||||| | ||||||||||||| ||   ||| | || | |||||||||| |||||||||||  | |||||||||| |||||||    
T  1705037 tttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtcaacgtgtccgacaccgagacacgcctaatccaaggagtgtccatgcttca 1704938  T
Q  97 tag 99  Q
    |||    
T  1704937 tag 1704935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 21366040 - 21365992
Alignment:
Q  51 tatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||| |||||||||||  |||||||||||||||||||||||    
T  21366040 tatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 21365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 1486754 - 1486646
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt------------gacacatatccgacaccgggacacgcctaaatcgaggagtgtcc 88  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||||            ||||| | ||||||||||||||||||||||  |||||||||||     
T  1486754 tttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtct 1486655  T
Q  89 gtgcttcat 97  Q
    |||||||||    
T  1486654 gtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 16812627 - 16812678
Alignment:
Q  51 tatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagttg 102  Q
    ||||||| ||||||||||||||||   |||||||||||||||||||||||||    
T  16812627 tatccgaaaccgggacacgcctaatctgaggagtgtccgtgcttcatagttg 16812678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 24577231 - 24577188
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  24577231 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 24577188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37598846 - 37598950
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||| ||||||||| ||||| ||||||| ||||       ||||| | |||||||  |||||||||||||  |||||||||||||||||    
T  37598846 tttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgct 37598944  T
Q  94 tcatag 99  Q
    ||||||    
T  37598945 tcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38078706 - 38078601
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    |||||||||||||||||||||| || ||||||||||||| ||||       ||||||| | | ||||| ||||||||||||  |||||||| | ||||||    
T  38078706 tttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgct 38078607  T
Q  94 tcatag 99  Q
    ||||||    
T  38078606 tcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 9828128 - 9828174
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  9828128 tccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 40917833 - 40917879
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||  |||||| ||||||||||||||||    
T  40917833 tccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 5944360 - 5944413
Alignment:
Q  46 acacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||| ||||||||||||| ||||||||  |||||||||| ||||||||||||    
T  5944360 acacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 99
Target Start/End: Complemental strand, 31694692 - 31694639
Alignment:
Q  46 acacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||| ||||||||| ||||||||||   ||||||||||||||||||||||    
T  31694692 acacatattcgacaccggaacacgcctaatctgaggagtgtccgtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 16297267 - 16297223
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||| ||||||||||||  |||||||||||||||||||||    
T  16297267 tccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 102
Target Start/End: Complemental strand, 38075954 - 38075906
Alignment:
Q  54 ccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagttg 102  Q
    ||||||||||||||||||||| | ||||||||| | |||||||||||||    
T  38075954 ccgacaccgggacacgcctaatttgaggagtgtacatgcttcatagttg 38075906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 6612216 - 6612173
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||    
T  6612216 tttgaaaaaattacataattcagtgtaattacaagtgtcggtgt 6612173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 18190153 - 18190047
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt--gacaca-----tatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||| ||||||||||||| |||||||||||||  |||  ||||||     | |||||||||||||||| |||||  ||||||||||  | |||    
T  18190153 tttgaaaaaattacataattcagtgtaattacaagtgtcgatgtcagacacaacacgtgtccgacaccgggacacacctaatccgaggagtgtatgcgct 18190054  T
Q  94 tcatagt 100  Q
    |||||||    
T  18190053 tcatagt 18190047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 99
Target Start/End: Complemental strand, 22794073 - 22794018
Alignment:
Q  44 tgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||| ||| |||||| ||||||||| ||||| ||||||||||| ||||||||||||    
T  22794073 tgacgcatgtccgactccgggacacacctaattcgaggagtgtacgtgcttcatag 22794018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 22947806 - 22947849
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||| ||||||||||||  |||||||||||||||||||||||    
T  22947806 gacacctggacacgcctaatccgaggagtgtccgtgcttcatag 22947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 27965983 - 27965940
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||||||  |||||||||||| ||||||||||    
T  27965983 gacaccgggacacgcctaatccgaggagtgtccatgcttcatag 27965940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 28273133 - 28273090
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||||    
T  28273133 tttgaaaaaatcatataattcagtgtaattacaagtgtcggtgt 28273090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 101
Target Start/End: Complemental strand, 35702579 - 35702540
Alignment:
Q  62 gggacacgcctaaatcgaggagtgtccgtgcttcatagtt 101  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  35702579 gggacacgcctaatccgaggagtgtccgtgcttcatagtt 35702540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 47989515 - 47989554
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  47989515 aaaaaatcacataattcagtgtaattacaagtgtcggtgt 47989554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 6427548 - 6427594
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||   || |||||||||||||||||||    
T  6427548 tccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 21378593 - 21378635
Alignment:
Q  2 ttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||    
T  21378593 ttgaaaaaattacataattcagtgtaattacaagtgtcggtgt 21378635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 23738692 - 23738722
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaatta 31  Q
    |||||||||||||||||||||||||||||||    
T  23738692 tttgaaaaaatcacataattcagtgcaatta 23738722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 29144366 - 29144320
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||| ||||||||||  ||| |||||||||||||||||||    
T  29144366 tccgacaccggaacacgcctaatccgaagagtgtccgtgcttcatag 29144320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31015057 - 31015095
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  31015057 tttgagaaaatcacataattcagtgtaattacaagtgtc 31015095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 46940794 - 46940748
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||| ||||||||||  |||||||||| ||||||||||||    
T  46940794 tccgacaccggaacacgcctaatccgaggagtgttcgtgcttcatag 46940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 95
Target Start/End: Complemental strand, 48040460 - 48040418
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttc 95  Q
    |||||||| ||||||||||||| | ||||||||||||||||||    
T  48040460 tccgacactgggacacgcctaattggaggagtgtccgtgcttc 48040418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 52903319 - 52903365
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||| || | |||| |||||||||||||||||||    
T  52903319 tccgacaccgggacacggcttattcgaagagtgtccgtgcttcatag 52903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 25452149 - 25452108
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    |||||||| |||||||||| ||||| ||||||||||||||||    
T  25452149 gacaccggaacacgcctaattcgagcagtgtccgtgcttcat 25452108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 36878541 - 36878585
Alignment:
Q  55 cgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||| |||||||||||||  | |||||||||||||||||||||    
T  36878541 cgacacggggacacgcctaatcccaggagtgtccgtgcttcatag 36878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 48547970 - 48547938
Alignment:
Q  67 acgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||| ||||||||||||||||||||||||    
T  48547970 acgcctaattcgaggagtgtccgtgcttcatag 48547938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 3e-22; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 2438760 - 2438661
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||||||||||||||| ||||||||||||| ||||       ||||||| ||||||||||||||||||||||  |||||||||||||||||||||    
T  2438760 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18841058 - 18840949
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||| |||||||| |||| ||||||||||||| ||||       ||||||| |||||||||||||||| |||||  |||||||||||||||||    
T  18841058 tttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgct 18840959  T
Q  94 tcatagttgc 103  Q
    ||||||||||    
T  18840958 tcatagttgc 18840949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 37558991 - 37559096
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    |||| ||||||||||||||||| || ||||||||||||| ||||       ||||| | ||||||||||| |||||| |||  |||||||||||||||||    
T  37558991 tttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgct 37559090  T
Q  94 tcatag 99  Q
    ||||||    
T  37559091 tcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 38117204 - 38117098
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt--gacaca-----tatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||||| ||| ||| ||||||||||||  ||||  ||||||     | ||||||||||||||||||||||  ||||| |||||||||||    
T  38117204 tttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcggacacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgct 38117105  T
Q  94 tcatagt 100  Q
    |||||||    
T  38117104 tcatagt 38117098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 37419827 - 37419873
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  37419827 tccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 15907905 - 15907849
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagtt 101  Q
    ||||||||||||||||||||||||||| ||   || |||||||||||||||||||||    
T  15907905 gacacatatccgacaccgggacacgcccaatctgatgagtgtccgtgcttcatagtt 15907849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 21624285 - 21624374
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt--gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgc 92  Q
    |||||||  |||||||||||| ||||||||||||| ||||  ||||| | ||||||| |||||||| |||||  | ||||||||||||||    
T  21624285 aaaaaatagcataattcagtgtaattacaagtgtcggtgtcggacacgtgtccgacagcgggacacacctaatccaaggagtgtccgtgc 21624374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 26769595 - 26769641
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||| |||||||||||||  |||||||||||||||||||||||    
T  26769595 tccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30404895 - 30404857
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  30404895 tttgaaaaaatcacataattcagtgtaattacaagtgtc 30404857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30717575 - 30717537
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  30717575 tttgaaaaaatcacataattcagtgtaattacaagtgtc 30717537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 15909616 - 15909567
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagttg 102  Q
    |||||||| ||||||||||||| |||| |||||| |||||||||||||||    
T  15909616 tccgacacagggacacgcctaattcgaagagtgttcgtgcttcatagttg 15909567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 44860404 - 44860449
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  44860404 tccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 11223836 - 11223793
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||||||   ||||||||||||||||||||||    
T  11223836 gacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 11223908 - 11223865
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||    
T  11223908 tttgaaaaaataacataattcagtgtaattacaagtgtcggtgt 11223865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 19536438 - 19536399
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  19536438 aaaaaatcacataattcagtgtaattacaagtgtcggtgt 19536399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 21374744 - 21374705
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtca 40  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  21374744 tttgaaaaaattacataattcagtgtaattacaagtgtca 21374705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 33153442 - 33153481
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  33153442 aaaaaatcacataattcagtgtaattacaagtgtccgtgt 33153481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 34993968 - 34993922
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||| ||||||||||||| || |||||||| ||||||||||||    
T  34993968 tccgacactgggacacgcctaattcaaggagtgttcgtgcttcatag 34993922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 42511368 - 42511322
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||| |||||||| ||||  |||||||||||||||||||||||    
T  42511368 tccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 18631394 - 18631349
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagtt 101  Q
    ||||| |||||||||||||  ||||||||||||| |||||||||||    
T  18631394 gacactgggacacgcctaatgcgaggagtgtccgagcttcatagtt 18631349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 19942341 - 19942382
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    |||||||||||||||||||  |||||||||||| ||||||||    
T  19942341 gacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 23058430 - 23058389
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgctt 94  Q
    ||||||||||||||||||||||  |||| |||||||||||||    
T  23058430 tccgacaccgggacacgcctaatccgagaagtgtccgtgctt 23058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Original strand, 24894407 - 24894440
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgt 38  Q
    ||||||||||||||||||||||||||| ||||||    
T  24894407 aaaaaatcacataattcagtgcaattaaaagtgt 24894440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 14450840 - 14450796
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgtg 45  Q
    ||||| |||||||||||||||| || ||| |||||||||||||||    
T  14450840 tttgagaaaatcacataattcaatgtaatcacaagtgtcagtgtg 14450796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 37419757 - 37419793
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtg 37  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  37419757 tttgaaaaaatcacaaaattcagtgtaattacaagtg 37419793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 44635568 - 44635612
Alignment:
Q  55 cgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||| |||||||||||   ||||||||||||||||||||||    
T  44635568 cgacaccgagacacgcctaatctgaggagtgtccgtgcttcatag 44635612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 5e-21; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20503479 - 20503584
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||       ||||||| || |||||||||||||||||||  |||||||||||||||||    
T  20503479 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtgttggacacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgct 20503578  T
Q  94 tcatag 99  Q
    ||||||    
T  20503579 tcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 55401089 - 55401194
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||       ||||| | |||||||||| |||||||||||  |||||||||||||||||    
T  55401089 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgct 55401188  T
Q  94 tcatag 99  Q
    ||||||    
T  55401189 tcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 40993376 - 40993275
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||||||||||||||| ||||| | ||||| ||||       ||||||| ||||||||||||||||||||||  |||||||||||| ||||||||    
T  40993376 aaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcat 40993277  T
Q  98 ag 99  Q
    ||    
T  40993276 ag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 34185098 - 34185049
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagttg 102  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  34185098 tccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatagttg 34185049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 49651770 - 49651716
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||||||||||| |||||  |||| ||||||||||||||||||    
T  49651770 gacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 25775522 - 25775624
Alignment:
Q  1 tttgaaaa-aatcacataattcagtgcaattacaagtgtcagtgt--gaca---catatccgacaccgggacacgcctaaatcgaggagtgtccgtgctt 94  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||||  ||||   | | ||||||||| ||||||||||||  |||||||||| |||||||    
T  25775522 tttgaaaataatcacataattcagtgtaattacaagtgtcggtgtcggacacgtcgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgctt 25775621  T
Q  95 cat 97  Q
    |||    
T  25775622 cat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 28918015 - 28918120
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt---------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtg 91  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||         ||||| | |||||||| |||||||||||||  | |||||||||| ||    
T  28918015 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtggacacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctg 28918114  T
Q  92 cttcat 97  Q
    ||||||    
T  28918115 cttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3164070 - 3163970
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||||| ||  ||||||||   ||| |   | | |||||||||| ||||||||||| ||||||||||||| ||||||||||    
T  3164070 tttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcgtgtcgtgtccgacaccgagacacgcctaattcgaggagtgtccatgcttcatag 3163971  T
Q  100 t 100  Q
    |    
T  3163970 t 3163970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 10954966 - 10955074
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgagg---agtgtccgt 90  Q
    ||||||||||||||||||||||||| ||| ||||||||| ||||       ||||| | |||||||| |||||||||||||  |||||   |||||||||    
T  10954966 tttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgt 10955065  T
Q  91 gcttcatag 99  Q
    |||||||||    
T  10955066 gcttcatag 10955074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 24205027 - 24204983
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  24205027 tccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10268531 - 10268488
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  10268531 tttgaaaaaatcacataatttagtgtaattacaagtgtcagtgt 10268488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 14209131 - 14209170
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  14209131 aaaaaatcacataattcagtgtaattacaagtgtcagtgt 14209170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 14979225 - 14979268
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  14979225 gacaccgggacacgcctaacccgaggagtgtccgtgcttcatag 14979268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 51206398 - 51206292
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt--gacacat-----atccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||||||||||||| || |||||||||| ||||  |||||||      ||||||||||||| ||  ||||  | |||||||||||||||    
T  51206398 tttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtcggacacatgtcgcgtccgacaccgggatacctctaatccaaggagtgtccgtgct 51206299  T
Q  94 tcatagt 100  Q
    |||||||    
T  51206298 tcatagt 51206292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 11610539 - 11610628
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgtgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||| | ||||||||||||     |  | | ||||||| ||||||||||||||   ||||||||||||||||||||||    
T  11610539 aaaaaatcacataattcagtgtagttacaagtgtca-----agtcgtgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26508124 - 26508162
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  26508124 tttgaaaaaatcacataattcagtgtaattacaagtgtc 26508162  T

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Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 27505324 - 27505370
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||| ||||||  |||||||||||||||||||||||    
T  27505324 tccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 40052385 - 40052431
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||||    
T  40052385 tccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 4466586 - 4466537
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagttg 102  Q
    |||||||| |||||||| || | |||||||||||||||||||||||||||    
T  4466586 tccgacactgggacacggcttattcgaggagtgtccgtgcttcatagttg 4466537  T

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Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4987336 - 4987299
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgt 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  4987336 tttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 5441022 - 5440965
Alignment:
Q  45 gacacatatccgacaccgggacacg-cctaaatcgaggagtgtccgtgcttcatagtt 101  Q
    ||||||| ||| |||||| |||||| ||||| ||||||||||||||||||||||||||    
T  5441022 gacacatgtccaacaccgagacacggcctaattcgaggagtgtccgtgcttcatagtt 5440965  T

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Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 4987266 - 4987222
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||||||||||||||||  |||||||||||||| ||||||    
T  4987266 tccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 98
Target Start/End: Complemental strand, 8789541 - 8789489
Alignment:
Q  46 acacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    |||||| || ||||||| |||||||||||  ||||||||||||||||||||||    
T  8789541 acacatgtcggacaccgagacacgcctaatccgaggagtgtccgtgcttcata 8789489  T

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Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 55212981 - 55213021
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgtg 45  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  55212981 aaaaaatcacataatttagtgcaattacaagtgtcggtgtg 55213021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 1509553 - 1509596
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||    
T  1509553 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 1509596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 8587066 - 8587023
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||    
T  8587066 tttgaaaaaatcacataattaagtgtaattacaagtgtcggtgt 8587023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14832113 - 14832156
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||| ||| || ||||||||||||||||||    
T  14832113 tttgaaaaaatcacataactcaatgtaattacaagtgtcagtgt 14832156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 33359775 - 33359870
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgtgacac-atatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttc 95  Q
    ||||||||  ||||||| || |||| || |||||||||||||||   || || ||||||| ||||||||| |||| | ||||||||||||||||||    
T  33359775 tttgaaaaggtcacatattttagtgtaaatacaagtgtcagtgtcggactatgtccgacatcgggacacgtctaattggaggagtgtccgtgcttc 33359870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34910331 - 34910374
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||||||| ||| ||||    
T  34910331 tttgaaaaaatcacataattcagtgtaattacaagagtcggtgt 34910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 49651831 - 49651788
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||||| || ||||||||||||| ||||    
T  49651831 tttgaaaaaatcacataattcactgtaattacaagtgtcggtgt 49651788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21257031 - 21256993
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    ||||||||||||||||||||||||  |||||||||||||    
T  21257031 tttgaaaaaatcacataattcagtataattacaagtgtc 21256993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 98
Target Start/End: Original strand, 34910393 - 34910435
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    |||||||||||||| ||||  ||||||||||||||||||||||    
T  34910393 gacaccgggacacgtctaatccgaggagtgtccgtgcttcata 34910435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 41961625 - 41961579
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||| |||||||||||||  |||| ||||||||||||||||||    
T  41961625 tccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 15999996 - 15999951
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    ||||||||||||||||||||||  | |||||||||||||| |||||    
T  15999996 tccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25948932 - 25948895
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgt 38  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  25948932 tttgaaaaaatcacataattcagtgtaattataagtgt 25948895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 35994778 - 35994745
Alignment:
Q  6 aaaaatcacataattcagtgcaattacaagtgtc 39  Q
    |||||||||||||||||||| |||||||||||||    
T  35994778 aaaaatcacataattcagtgtaattacaagtgtc 35994745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 105
Target Start/End: Original strand, 3631749 - 3631809
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagttgcat 105  Q
    ||||||| ||||||||| |||||||||||   |||||||||||||||| |||  |||||||    
T  3631749 gacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgcctcagtgttgcat 3631809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 4990948 - 4990912
Alignment:
Q  63 ggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||  |||||||||||||||||||||||    
T  4990948 ggacacgcctaatccgaggagtgtccgtgcttcatag 4990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 8593154 - 8593194
Alignment:
Q  4 gaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||||  ||||||||||||| ||||    
T  8593154 gaaaaaatcacataattcagtataattacaagtgtcggtgt 8593194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 11658871 - 11658915
Alignment:
Q  55 cgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||| |||| ||||||||||||| | ||||||||    
T  11658871 cgacaccgggacacgtctaattcgaggagtgtccatacttcatag 11658915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 8e-20; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 5409881 - 5409771
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt------------gacacatatccgacaccgggacacgcctaaatcgaggagtgtcc 88  Q
    ||||||||||||||||||||||||||||||||||||||| ||||            ||||| | ||||||||||||||||||||||  ||||||||||||    
T  5409881 tttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtcc 5409782  T
Q  89 gtgcttcatag 99  Q
    |||||||||||    
T  5409781 gtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40287401 - 40287300
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt--gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    ||||||||||||| ||| ||||||| ||||||||||||| || |  ||||||| ||||||||||||||| ||||||  ||||||||||||||||||| ||    
T  40287401 tttgaaaaaatcatata-ttcagtgtaattacaagtgtcggtatcggacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcgta 40287303  T
Q  99 gtt 101  Q
    |||    
T  40287302 gtt 40287300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21880166 - 21880271
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||| ||||| ||||||||||||| ||||||||||||| ||||       ||||||| ||||||||| ||||||||||||  |||| ||||||||||||    
T  21880166 tttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgct 21880265  T
Q  94 tcatag 99  Q
    ||||||    
T  21880266 tcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 15680827 - 15680928
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    |||||||||||||||| |||| ||||| ||||||| ||||       ||||| | |||||||||| |||||| |||| ||||||||||||||||||||||    
T  15680827 aaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcat 15680926  T
Q  98 ag 99  Q
    ||    
T  15680927 ag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 24339718 - 24339772
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||| ||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  24339718 gacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 6490789 - 6490837
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagtt 101  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||||    
T  6490789 tccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatagtt 6490837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9778514 - 9778624
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacaca-----tatccgacaccgggacacgcctaaatcgaggagtgtcc 88  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||       ||||||     | ||||||||||||||||||||||  | ||||||||||    
T  9778514 tttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtcc 9778613  T
Q  89 gtgcttcatag 99  Q
    |||||||||||    
T  9778614 gtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 17852064 - 17852120
Alignment:
Q  44 tgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagt 100  Q
    |||||| | |||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  17852064 tgacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatagt 17852120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 21864826 - 21864927
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||| |||||| |||| |||||||||||||  |||       ||||| | ||||||||||||||||| |||| |||||||||||| |||||||||    
T  21864826 aaaaaatcatataatttagtgtaattacaagtgtcgctgtcggacacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcat 21864925  T
Q  98 ag 99  Q
    ||    
T  21864926 ag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 24339656 - 24339699
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  24339656 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 24339699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 33994226 - 33994331
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||  ||||||||||||||||||||||||||||| ||||       ||||||| ||| |||||| |||||||||||  | |||||||| |||| |    
T  33994226 tttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtcagacacgacacatgtccaacaccgagacacgcctaatccaaggagtgttcgtgtt 33994325  T
Q  94 tcatag 99  Q
    ||||||    
T  33994326 tcatag 33994331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 598281 - 598327
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||||    
T  598281 tccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26033506 - 26033468
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  26033506 tttgaaaaaatcacataattcagtgtaattacaagtgtc 26033468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 43027450 - 43027404
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||    
T  43027450 tccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatag 43027404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25481916 - 25481953
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgt 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  25481916 tttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 32287449 - 32287404
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    |||||||||||||||| |||||  ||||||||||||||||||||||    
T  32287449 tccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 43250077 - 43250118
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgctt 94  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  43250077 tccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3991338 - 3991381
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||    
T  3991338 tttgaaaaaatcacataattcagtataattacaagtgtcggtgt 3991381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7438720 - 7438763
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||||| || ||||||||||||| ||||    
T  7438720 tttgaaaaaatcacataattcaatgtaattacaagtgtcggtgt 7438763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9408379 - 9408336
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||    
T  9408379 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 9408336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 18039017 - 18039056
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  18039017 aaaaaatcacataattcagtgtaattacaagtgtcggtgt 18039056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 21560521 - 21560560
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  21560521 aaaaaatcacataattcagtgtaattacaagtgtcggtgt 21560560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 1433532 - 1433578
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||| ||||||| ||||  |||||||||||||||||||||||    
T  1433532 tccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 7438782 - 7438836
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||| | ||||||  |||||||||||| || |||||||||||||||||||||    
T  7438782 gacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcatag 7438836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 14729776 - 14729822
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||||| |||  |||||||||||||| ||||||||    
T  14729776 tccgacaccgggacacgcttaatccgaggagtgtccgtacttcatag 14729822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 24105751 - 24105797
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||  ||||||||||  |||||||||||    
T  24105751 tccgacaccgggacacgcctaacccgaggagtgtttgtgcttcatag 24105797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 29763175 - 29763129
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||| | ||||||||||||  |||||||||||||||||||||||    
T  29763175 tccgacatcaggacacgcctaatccgaggagtgtccgtgcttcatag 29763129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 32094001 - 32093951
Alignment:
Q  53 tccgacaccggg-acacgcctaaatcgaggagtgtccgtgcttcatagttg 102  Q
    |||||||||||| ||||||||||  |||||||||| |||||||||||||||    
T  32094001 tccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatagttg 32093951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 8842323 - 8842282
Alignment:
Q  55 cgacaccgggacacgcctaaatcgaggagtgtccgtgcttca 96  Q
    ||||||||||||||||||||  | ||||||||||||||||||    
T  8842323 cgacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 20545238 - 20545185
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    ||||||| |||||||| ||||||||  ||| |||||||||||| ||||||||||    
T  20545238 gacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcata 20545185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 99
Target Start/End: Original strand, 27945104 - 27945137
Alignment:
Q  66 cacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||| ||||||||||||||||||||||||    
T  27945104 cacgcctaactcgaggagtgtccgtgcttcatag 27945137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 13557782 - 13557750
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtg 37  Q
    ||||||||||||||||||||| |||||||||||    
T  13557782 aaaaaatcacataattcagtgtaattacaagtg 13557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 35862034 - 35862070
Alignment:
Q  63 ggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||  |||||||||||||||||||||||    
T  35862034 ggacacgcctaatccgaggagtgtccgtgcttcatag 35862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 3e-19; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 21191101 - 21190998
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt--gacaca-----tatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||  ||||||     | |||||| |||||||||||||||  |||||||||||||||||    
T  21191101 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgct 21191002  T
Q  94 tcat 97  Q
    ||||    
T  21191001 tcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21576790 - 21576685
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||||||||||||| |||||||||||||  |||       ||||| | || ||||| |||||||||||||  |||||||||||||||||    
T  21576790 tttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgct 21576691  T
Q  94 tcatag 99  Q
    ||||||    
T  21576690 tcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 38464409 - 38464313
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgtgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||| |||||||||| ||||| || ||||| |||||||||||   ||||| |||||||||||||||| |||||  ||||||||||| |||||||||||    
T  38464409 tttgagaaaatcacattattcattgaaattataagtgtcagtgg--cacatgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcatag 38464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24906346 - 24906250
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgtgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagt 100  Q
    ||||||||||| ||||||||||||| ||||||||||||| || |   ||||    ||||   |||||||||||| |||||||||||||||||||||||||    
T  24906346 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtatcggacat----gacaataggacacgcctaattcgaggagtgtccgtgcttcatagt 24906251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 39698555 - 39698598
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  39698555 tttgaaaaaatcacataattcagtgtaattacaagtgtcagtgt 39698598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42893374 - 42893479
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt--gacaca-----tatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||  ||||||     | ||||||||| ||||||||||||   ||||||||||| ||||    
T  42893374 tttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtcagacacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgct 42893473  T
Q  94 tcatag 99  Q
    ||||||    
T  42893474 tcatag 42893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Original strand, 39698623 - 39698672
Alignment:
Q  51 tatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagt 100  Q
    |||||||||||| |||||||||||  ||||||||||||||||||||||||    
T  39698623 tatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagt 39698672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6247636 - 6247679
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  6247636 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 6247679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7677719 - 7677762
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||    
T  7677719 tttgaaaaaatcacataattcagtgcaattagaagtgtcggtgt 7677762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 6326342 - 6326253
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgtgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||| ||||| ||||||||||||| ||||||||||||||| ||         | |||||||| |||||||||| ||||| ||||||||||||||||||    
T  6326342 tttgagaaaattacataattcagtgtaattacaagtgtcagcgt---------cggacaccggaacacgcctaattcgagaagtgtccgtgcttcatag 6326253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 14873599 - 14873641
Alignment:
Q  57 acaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  14873599 acaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 19820374 - 19820328
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||    
T  19820374 tccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 99
Target Start/End: Original strand, 28862379 - 28862417
Alignment:
Q  61 cgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  28862379 cgggacacgcctaaatcgagaagtgtccgtgcttcatag 28862417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 15884006 - 15884096
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgtgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||| ||||||||||||| ||||   |||    |||||| || ||||||||||  ||||||||||| ||| |||||||    
T  15884006 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcggaca----cgacactggaacacgcctaatccgaggagtgtctgtgtttcatag 15884096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 17123116 - 17123168
Alignment:
Q  48 acatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagtt 101  Q
    |||| |||||||| |||||||||||||  |||||||||||||||||||||||||    
T  17123116 acatgtccgacac-gggacacgcctaatccgaggagtgtccgtgcttcatagtt 17123168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 7677783 - 7677835
Alignment:
Q  47 cacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||| ||||||||||||||||||||||  ||||||| ||| |||||||||||    
T  7677783 cacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 12199948 - 12199987
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  12199948 aaaaaatcacataattcagtacaattacaagtgtcggtgt 12199987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13287444 - 13287401
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| || |||||||||| ||||    
T  13287444 tttgaaaaaatcacataattcagtgtaactacaagtgtcggtgt 13287401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 19579715 - 19579758
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||| |||||||||||||| |||||||||||||||||| ||||    
T  19579715 tttgagaaaatcacataatttagtgcaattacaagtgtcggtgt 19579758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 100
Target Start/End: Original strand, 35017124 - 35017163
Alignment:
Q  61 cgggacacgcctaaatcgaggagtgtccgtgcttcatagt 100  Q
    ||||||||||||||  ||||||||||||||||||||||||    
T  35017124 cgggacacgcctaatccgaggagtgtccgtgcttcatagt 35017163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 39268584 - 39268541
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttca 96  Q
    |||||||| |||||||||||||  ||||||||||||||||||||    
T  39268584 tccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43564895 - 43565000
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    |||| ||||||||||||||| |||| ||||| ||||||| ||||       ||||  | |||||| |||||||||||||||  |||| ||||||||||||    
T  43564895 tttggaaaaatcacataatttagtgtaattataagtgtcggtgtcggacacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgct 43564994  T
Q  94 tcatag 99  Q
    ||||||    
T  43564995 tcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14674283 - 14674321
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  14674283 tttgaaaaaatcacataatttagtgtaattacaagtgtc 14674321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 15382550 - 15382592
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtc 87  Q
    ||||||| ||||||||||||||||||||||  |||||||||||    
T  15382550 gacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 91
Target Start/End: Original strand, 17088364 - 17088402
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtg 91  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  17088364 tccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 21194117 - 21194063
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||| || ||||||||| |||||||||  |||||||||||||||||| ||||    
T  21194117 gacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatag 21194063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31084337 - 31084375
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    |||||||||||||||||||||| || |||||||||||||    
T  31084337 tttgaaaaaatcacataattcaatgtaattacaagtgtc 31084375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43001814 - 43001851
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgt 38  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  43001814 tttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Original strand, 10298633 - 10298669
Alignment:
Q  63 ggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||  |||||||||||||||||||||||    
T  10298633 ggacacgcctaatccgaggagtgtccgtgcttcatag 10298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 21351947 - 21351907
Alignment:
Q  4 gaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||| ||||||||||||||| ||||||||||||| ||||    
T  21351947 gaaaaagtcacataattcagtgtaattacaagtgtcggtgt 21351907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 99
Target Start/End: Complemental strand, 22423800 - 22423764
Alignment:
Q  63 ggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||  |||||||||||||||||||||||    
T  22423800 ggacacgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 43001882 - 43001922
Alignment:
Q  57 acaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||| ||||||||||||  |||||||||||||||||||||    
T  43001882 acacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 34595148 - 34595253
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||       ||||| | || ||||||||||||| |||||  |||||||||||||||||    
T  34595148 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgct 34595247  T
Q  94 tcatag 99  Q
    ||||||    
T  34595248 tcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 31959173 - 31959268
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgtgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    ||||||||||||||||||| ||||| ||||||||||||| | |  |||  | |||||||||||||||| |||||  ||||||||||||||||||||||    
T  31959173 tttgaaaaaatcacataatgcagtgtaattacaagtgtcggcg--acatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 28152117 - 28152218
Alignment:
Q  6 aaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    |||||||||||||||||||| ||||||||||||| ||||       ||||| | ||||||||||||||| ||||||  |||||||||| |||||||||||    
T  28152117 aaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcata 28152216  T
Q  99 gt 100  Q
    ||    
T  28152217 gt 28152218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28715309 - 28715414
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||       ||||| | | |||||||||||||||||||| ||||| ||||| ||||||    
T  28715309 tttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgct 28715408  T
Q  94 tcatag 99  Q
    ||||||    
T  28715409 tcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 7930319 - 7930413
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagt---gtgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgc 92  Q
    |||||||||||||||||||| |||| |||| |||||||| ||   ||| ||| | ||||||||| |||||||||||| ||||||||||| |||||    
T  7930319 tttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcgtgtcacgtgtccgacaccaggacacgcctaattcgaggagtgttcgtgc 7930413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31384934 - 31384977
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  31384934 tttgaaaaaatcacataattcagtgtaattacaagtgtcagtgt 31384977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 9025539 - 9025448
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgtgacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttca 96  Q
    ||||| ||||||||||||||||||| ||||| | ||||| ||||    | | ||||||||||||||||||||||  |||| |||||||||||||||    
T  9025539 tttgagaaaatcacataattcagtgtaattatatgtgtcggtgt----cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 32978940 - 32978842
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttca 96  Q
    |||||| ||||||||| |||| ||||||||||||| ||||       ||||||| ||||||||||||||||| ||||  | ||||||||||||||||||    
T  32978940 aaaaaaacacataattaagtgtaattacaagtgtcggtgtcggacacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 853904 - 853861
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||||||||||||||||| ||||    
T  853904 tttgaaaaaatcacataattaagtgcaattacaagtgtcggtgt 853861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 104
Target Start/End: Complemental strand, 10339108 - 10339049
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagttgca 104  Q
    ||||||| |||||||| |||||||||||||   |||||||||||||||||||||| ||||    
T  10339108 gacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcataggtgca 10339049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 10770719 - 10770676
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  10770719 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 10770676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12696338 - 12696381
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||    
T  12696338 tttgaaaaaattacataattcagtgtaattacaagtgtcagtgt 12696381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16766711 - 16766754
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  16766711 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 16766754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 34073323 - 34073276
Alignment:
Q  54 ccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagtt 101  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||    
T  34073323 ccgacaccgggacacctctaattcgaggagtgtccgtgcttcatagtt 34073276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 17841634 - 17841530
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    |||||||||||||||||||| |||| ||||||||||| | ||||       ||||  | |||||||| | |||||||||||  |||||||||||||||||    
T  17841634 tttgaaaaaatcacataatttagtgtaattacaagtgacggtgtcggacacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgct 17841535  T
Q  94 tcata 98  Q
    |||||    
T  17841534 tcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 4877956 - 4878061
Alignment:
Q  1 tttgaaaaaa-tcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgc 92  Q
    |||||||||| |||||||||| |||  ||||||||||||| ||||       ||||||| |||||||| || ||||||||||  ||||||||||||||||    
T  4877956 tttgaaaaaagtcacataattaagtataattacaagtgtcggtgtcggacacgacacatgtccgacacagg-acacgcctaatccgaggagtgtccgtgc 4878054  T
Q  93 ttcatag 99  Q
    |||||||    
T  4878055 ttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 7248442 - 7248489
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagt 100  Q
    ||||||||||||||||| | ||  ||||||||||||||||||||||||    
T  7248442 tccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatagt 7248489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7801201 - 7801158
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||    
T  7801201 tttgaaaaaatcacataattcagcgtaattacaagtgtcggtgt 7801158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 7977875 - 7977832
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||    
T  7977875 tttgaaaaaattacataattcagtgtaattacaagtgtcggtgt 7977832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 8389454 - 8389411
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttca 96  Q
    |||||||||||||||| |||||  ||||||||||||||||||||    
T  8389454 tccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 9107415 - 9107372
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||    
T  9107415 tttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgt 9107372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 9522909 - 9522948
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  9522909 aaaaaatcacataattcagtgtaattacaagtgtcggtgt 9522948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16833322 - 16833365
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||| ||||||| ||||||||||||| ||||    
T  16833322 tttgaaaaaatcacatacttcagtgtaattacaagtgtcggtgt 16833365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 17327633 - 17327590
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||| |||||||||||||  |||||||||||||||||||||||    
T  17327633 gacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1681772 - 1681810
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  1681772 tttgaaaaaatcacgtaattcagtgtaattacaagtgtc 1681810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2117090 - 2117128
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    |||||||||||||||||||||| |||||||| |||||||    
T  2117090 tttgaaaaaatcacataattcaatgcaattataagtgtc 2117128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 7938173 - 7938219
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||| ||||||||| |  |||||||||||||||||||||||    
T  7938173 tccgacaccgagacacgcctgatccgaggagtgtccgtgcttcatag 7938219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 8365494 - 8365448
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||| |||||||||||||  |||||||| ||||||||||||||    
T  8365494 tccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 8776954 - 8776908
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||| ||||| |||||  |||||||||||||||||||||||    
T  8776954 tccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 9107345 - 9107299
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||||    
T  9107345 tccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13360417 - 13360311
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt--gacaca----tatccgacaccgggacacgcctaaatcgaggagtgtccgtgctt 94  Q
    ||||| ||||||||||||||||||| ||||| | || || ||||  ||||||    | |||||||| | |||||||||||  ||| ||||||||||||||    
T  13360417 tttgagaaaatcacataattcagtgtaattatatgtttcggtgtcagacacaacaatgtccgacactgagacacgcctaatccgaagagtgtccgtgctt 13360318  T
Q  95 catagtt 101  Q
    |||||||    
T  13360317 catagtt 13360311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 16766781 - 16766827
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||  ||| || ||||||||||||||||    
T  16766781 tccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 5970153 - 5970120
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaa 34  Q
    ||||||||||||||||||||||||| ||||||||    
T  5970153 tttgaaaaaatcacataattcagtgtaattacaa 5970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8777018 - 8776981
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgt 38  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  8777018 tttgaaaaaatcacaaaattcagtgtaattacaagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 31384995 - 31385048
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    ||||| | ||| ||||||||||||||||||  | ||||||||||||||||||||    
T  31384995 gacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 5000609 - 5000557
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||||||||||| ||||||| ||||  ||| |||||| ||||||||||    
T  5000609 gacacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 9911566 - 9911530
Alignment:
Q  8 aaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||| ||||||||||||| ||||    
T  9911566 aaatcacataattcagtgtaattacaagtgtcggtgt 9911530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17341709 - 17341669
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcag 41  Q
    ||||| ||||||||||||||||||| ||||| |||||||||    
T  17341709 tttgataaaatcacataattcagtgtaattataagtgtcag 17341669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 8342986 - 8343086
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt--gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||   |||  | ||||||||||||||||||||||  ||| ||||||| ||||||||||    
T  8342986 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtacatgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcata 8343085  T
Q  99 g 99  Q
    |    
T  8343086 g 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 18407737 - 18407838
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||||||||||||||| |||||||||||||  ||        ||||||| ||||||||  |||||||||||| | ||||||||||||||||||||    
T  18407737 aaaaaatcacataattcagtgtaattacaagtgtcgctgccggacacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcat 18407836  T
Q  98 ag 99  Q
    ||    
T  18407837 ag 18407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 40332205 - 40332307
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||       ||||| | ||| |||||||||| |||||||  ||||||||||||||| |    
T  40332205 tttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtt 40332304  T
Q  94 tca 96  Q
    |||    
T  40332305 tca 40332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 44067600 - 44067644
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||    
T  44067600 tccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4948666 - 4948709
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  4948666 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 4948709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5813606 - 5813707
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||| ||||||| || |||| || |||||||||| ||||       ||||| | |||||||||||||||||||||| | ||||||||||||||||    
T  5813606 tttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgct 5813705  T
Q  94 tc 95  Q
    ||    
T  5813706 tc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8343330 - 8343373
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  8343330 tttgaaaaaatcacataatttagtgtaattacaagtgtcagtgt 8343373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 15816105 - 15816058
Alignment:
Q  52 atccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||    
T  15816105 atccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 17751725 - 17751776
Alignment:
Q  49 catatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagt 100  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||||||||||    
T  17751725 catagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatagt 17751776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 17760712 - 17760763
Alignment:
Q  49 catatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagt 100  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||||||||||    
T  17760712 catagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatagt 17760763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25566855 - 25566898
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||    
T  25566855 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgt 25566898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36450799 - 36450694
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||| ||||||||| ||||||||||||  ||||       ||| | | ||||||||| ||||||||||||  ||||||||||| |||||    
T  36450799 tttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgct 36450700  T
Q  94 tcatag 99  Q
    ||||||    
T  36450699 tcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 6065640 - 6065586
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||| ||||||||||| |||||| ||| || |||||||||||||||||||||    
T  6065640 gacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatag 6065586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 13397624 - 13397670
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||| ||||||||||| || |||||||||||||||||||||    
T  13397624 tccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatag 13397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 22652060 - 22652106
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  22652060 tccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 29510279 - 29510233
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||||||| |||||  |||||||||||||||||||||||    
T  29510279 tccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 20679440 - 20679337
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgtga-------cacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||| ||||||||||| ||||||| ||||| ||||||| |||| |       ||| | |||||||||||||||||||| || |||||||||||| ||||    
T  20679440 tttgagaaaatcacatagttcagtgtaattataagtgtcggtgtcagacgcaacacgtgtccgacaccgggacacgccttaaccgaggagtgtccatgct 20679341  T
Q  94 tcat 97  Q
    ||||    
T  20679340 tcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 11803335 - 11803391
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatagtt 101  Q
    ||||||| |||||||| || ||||| ||||  |||||||||||||||||||||||||    
T  11803335 gacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatagtt 11803391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2572101 - 2572058
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||    
T  2572101 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 2572058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 14134713 - 14134818
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||| ||||||||||||||||||| ||||| |  |||| ||||       ||||| | |||| |||| |||||||||||| |||||||||||||||| |    
T  14134713 tttgagaaaatcacataattcagtgtaattatatatgtcggtgtcaaacacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtt 14134812  T
Q  94 tcatag 99  Q
    ||||||    
T  14134813 tcatag 14134818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20873083 - 20873126
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||    
T  20873083 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 20873126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22197787 - 22197744
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||    
T  22197787 tttgaaaaattcacataatttagtgtaattacaagtgtcagtgt 22197744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30077432 - 30077389
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||    
T  30077432 tttgaaaacatcacataattcagtgtaattacaagtgtccgtgt 30077389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 30271336 - 30271293
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||    
T  30271336 tttgaaaaaatcacataatgcagtgtaattacaagtgccagtgt 30271293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 98
Target Start/End: Original strand, 3658237 - 3658271
Alignment:
Q  64 gacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    ||||||||||| |||||||||||||||||||||||    
T  3658237 gacacgcctaattcgaggagtgtccgtgcttcata 3658271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 4673404 - 4673354
Alignment:
Q  49 catatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||| ||||||||||  | ||||||||| |||||||||||    
T  4673404 catatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcatag 4673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 8343400 - 8343446
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||  ||| ||||||| |||||||||||    
T  8343400 tccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 13403179 - 13403225
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||| ||||||| ||| || |||||||||||||||||||||    
T  13403179 tccgacaccgagacacgcttaattcaaggagtgtccgtgcttcatag 13403225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41831985 - 41831947
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  41831985 tttgaaaaaatcacataattcagtgtaactacaagtgtc 41831947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 38
Target Start/End: Complemental strand, 41838164 - 41838131
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgt 38  Q
    |||||||||||||||||||||||| |||||||||    
T  41838164 aaaaaatcacataattcagtgcaactacaagtgt 41838131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 11944747 - 11944795
Alignment:
Q  51 tatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||||||| |||||||||||  ||| |||||| ||||||||||||    
T  11944747 tatccgacaccgagacacgcctaatccgatgagtgttcgtgcttcatag 11944795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 13436954 - 13436910
Alignment:
Q  55 cgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||  | ||||||||| |||||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgcttcatag 13436910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 16641951 - 16641907
Alignment:
Q  57 acaccgggacacgcctaaatcgaggagtgtccgtgcttcatagtt 101  Q
    |||||||||||| |||||  ||||||||||| |||||||||||||    
T  16641951 acaccgggacacacctaatccgaggagtgtctgtgcttcatagtt 16641907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 16987990 - 16988030
Alignment:
Q  57 acaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    |||||||||||| |||||  |||||||||||||||||||||    
T  16987990 acaccgggacacccctaatccgaggagtgtccgtgcttcat 16988030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 4924 - 4821
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt---------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttc 95  Q
    ||||||||||||||||||||| ||||||||||||  ||||         ||||||| |||||||| |||||||||||||  |||||||||||||||||||    
T  4924 aaaaaatcacataattcagtgtaattacaagtgttggtgtcttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttc 4825  T
Q  96 atag 99  Q
    ||||    
T  4824 atag 4821  T

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Target: scaffold0652 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 507 - 403
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt-------gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgct 93  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||       ||| | | |||||||||||||||| |||||  |||||||||||||||||    
T  507 tttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgct 408  T
Q  94 tcata 98  Q
    |||||    
T  407 tcata 403  T

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Target: scaffold0223 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20186 - 20229
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  20186 tttgaaaaaatcacataattcagtgtaattacaagtgtcagtgt 20229  T

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Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 3890 - 3851
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3890 aaaaaatcacataattcagtgtaattacaagtgtcagtgt 3851  T

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Target: scaffold0136; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 3832 - 3778
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||| ||||||| || |||||||||||  |||||||||||| ||||||||||    
T  3832 gacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

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Target: scaffold0450 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 8610 - 8564
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    |||||||| || |||||||||| ||||||||||||||||||||||||    
T  8610 tccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 130496 - 130534
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtc 39  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  130496 tttgaaaaaatcacataattcagtgtaattacaagtgtc 130534  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 97
Target Start/End: Complemental strand, 225241 - 225199
Alignment:
Q  55 cgacaccgggacacgcctaaatcgaggagtgtccgtgcttcat 97  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  225241 cgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 241678 - 241724
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||||||||  |||| ||||||||||||||||||    
T  241678 tccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

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Target: scaffold0103 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 51825 - 51862
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgt 38  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  51825 tttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

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Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 92887 - 92940
Alignment:
Q  45 gacacatatccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcata 98  Q
    ||||||| || |||||| ||||||||||||  ||||||||||||||||||||||    
T  92887 gacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 92821 - 92862
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagt 42  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||    
T  92821 tttgagaaaattacataattcagtgtaattacaagtgtcagt 92862  T

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Target: scaffold0361 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 14544 - 14580
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtg 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  14544 tttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 178864 - 178820
Alignment:
Q  1 tttgaaaaaatca-cataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||    
T  178864 tttgaaaaaatcatcataattcagtgtaattacaagtgtcagtgt 178820  T

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Target: scaffold0475 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 3384 - 3427
Alignment:
Q  56 gacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||| |||||||||||||  |||||||||||||||||||||||    
T  3384 gacactgggacacgcctaatccgaggagtgtccgtgcttcatag 3427  T

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Target: scaffold0306 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 13414 - 13457
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||||    
T  13414 tttgagaaaatcacataattcagtgcaattacaagggtcggtgt 13457  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 23529 - 23568
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  23529 aaaaaatcacataattcagtgtaattataagtgtcagtgt 23568  T

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Target: scaffold0152 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 21913 - 21870
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||||    
T  21913 tttgagaaaatcacataattcagtgcaattacaagggtcggtgt 21870  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 63787 - 63830
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||    
T  63787 tttgagaaaattacataattcagtgcaattacaagtgtcggtgt 63830  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 46696 - 46739
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||    
T  46696 tttgaaaaaatcacataattcagtgtaattacaaatgtcggtgt 46739  T

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Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 46741 - 46778
Alignment:
Q  64 gacacgcctaaatcgaggagtgtccgtgcttcatagtt 101  Q
    |||||||||||  |||||||||||||||||||||||||    
T  46741 gacacgcctaatccgaggagtgtccgtgcttcatagtt 46778  T

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Target: scaffold0025 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 23788 - 23827
Alignment:
Q  5 aaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  23788 aaaaaatcacataattcagtgtaattacaagtgtcggtgt 23827  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 17794 - 17751
Alignment:
Q  1 tttgaaaaaatcacataattcagtgcaattacaagtgtcagtgt 44  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||    
T  17794 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgt 17751  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 71809 - 71855
Alignment:
Q  53 tccgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||||||||||| ||||  ||||||||||| |||||||||||    
T  71809 tccgacaccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 188471 - 188512
Alignment:
Q  51 tatccgacaccgggacacgcctaaatcgaggagtgtccgtgc 92  Q
    ||||||||||| ||||||||||||  ||||||||||||||||    
T  188471 tatccgacaccaggacacgcctaatccgaggagtgtccgtgc 188512  T

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Target: scaffold0246 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 19594 - 19626
Alignment:
Q  6 aaaaatcacataattcagtgcaattacaagtgt 38  Q
    |||||||||||||||||||| ||||||||||||    
T  19594 aaaaatcacataattcagtgtaattacaagtgt 19626  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 99
Target Start/End: Original strand, 3014 - 3058
Alignment:
Q  55 cgacaccgggacacgcctaaatcgaggagtgtccgtgcttcatag 99  Q
    ||||||||| ||||||||||  ||||||||||||||||| |||||    
T  3014 cgacaccggaacacgcctaatccgaggagtgtccgtgctccatag 3058  T

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