View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10621_low_37 (Length: 227)
Name: NF10621_low_37
Description: NF10621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10621_low_37 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 49545791 - 49546008
Alignment:
| Q |
1 |
ctaaaacgtcaggtgaagcttgtggagacaaggaaaaggtagcacattcatagaatggatcctgaagctactcctcttggctcttagtcaaaataatctg |
100 |
Q |
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| T |
49545791 |
ctaaaacgtcaggtgaagcttgtggagacaaggaaaaggtagcacattcatagaatggatcctgaagctactcgtctt-------agtcaaaataatctg |
49545883 |
T |
|
| Q |
101 |
aaccgtctttaagagatatcttactattagcatcaattatggctggtgaattgtgatcacctgaatatttatttatactgttctagatgaataactaaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49545884 |
aaccgtctttaagagatatcttactattagcatcaattatggctggtgaattgtgatcacctgaatatttatttatactgttctagatgaataactaaat |
49545983 |
T |
|
| Q |
201 |
aagtagtgtatagaaagaaatcaag |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
49545984 |
aagtagtgtatagaaagaaatcaag |
49546008 |
T |
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