View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10621_low_39 (Length: 222)
Name: NF10621_low_39
Description: NF10621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10621_low_39 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 41023278 - 41023069
Alignment:
| Q |
1 |
ccaccgccgtcaacaatgggtttcttcgacctaaacataccttacccttcacccaccacaaaaccttctaaatccaccatcgaaaacaaccgaacgcgcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41023278 |
ccaccgccgtcaacaatgggtttcttcgacctaaacataccttacccttcacccaccacaaaaccttctaaatccaccatcgaaaacaaccgaacgcgcc |
41023179 |
T |
|
| Q |
101 |
tcgccgttaaagcaatggaattaggttacacaggaatcgcttacaaccgcacgatgaaaggcgtaatgtccgataaccatcgttgctcaatctccccact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
41023178 |
tcgccgttaaagcaatggaattaggttacacaggaatcgcttacaaccgcacgatgaaaggcttaatgtccgataaccatcgttgctcaatctccccact |
41023079 |
T |
|
| Q |
201 |
ttctctctct |
210 |
Q |
| |
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|||||||||| |
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|
| T |
41023078 |
ttctctctct |
41023069 |
T |
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