View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10621_low_6 (Length: 366)
Name: NF10621_low_6
Description: NF10621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10621_low_6 |
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Alignment Details
Target: chr3 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 18 - 352
Target Start/End: Original strand, 37215467 - 37215801
Alignment:
| Q |
18 |
gatatgatatgagatagttgaagattacatacatttctgagcgttgaagaagcgtagtgctttgtgaagagcaagggtgtaattatcaggtggtataggt |
117 |
Q |
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| T |
37215467 |
gatatgagatgagatagttgaagattacatacatttctgagcgttgaagaagcgtagtgctttgtgaagagcaagggtgtaattatcaggtggtataggt |
37215566 |
T |
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| Q |
118 |
gaaggatgatgtttaggcaaagccttggcaatgatgataggaagaccaattgcacaaaaacccacaaagattataccaaaaatccatttcaatgccttgt |
217 |
Q |
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| T |
37215567 |
gaaggatgatgtttaggcaaagccttggcaatgatgataggaagaccaattgcacaaaaacccacaaagattataccaaaaatccatttcaatgccttgt |
37215666 |
T |
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| Q |
218 |
gactcaacacgatgcatccaaaatccacatacttggtcttcttcttcatatttggcctttcaagaatccagctttgtagtgtctcatccaatccctcgcg |
317 |
Q |
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| T |
37215667 |
gactcaacacgatgcatccaaaatccacatacttggtcttcttcttcatatttggcctttcaagaatccagctttgtagtgtctcatccaatccctcgcg |
37215766 |
T |
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| Q |
318 |
tcgattaccatgatctagcaacgctgccttgtccc |
352 |
Q |
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| T |
37215767 |
tcgattaccatgatcgagcaacgctgccttgtccc |
37215801 |
T |
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