View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10621_low_8 (Length: 350)
Name: NF10621_low_8
Description: NF10621
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10621_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 17 - 339
Target Start/End: Complemental strand, 34866432 - 34866112
Alignment:
| Q |
17 |
acttatcaaatggtatcagagagactggttgtcgatgtctcacaaagtgctacctacagaagggctaactggaaagctcgagtaaagctttgtagtgtag |
116 |
Q |
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| T |
34866432 |
acttatcaaatggtatcagaga--ctggttgtcgatgtctcacaaagtgctacctacagaagggctaactggaaagctcgagtaaagctttgtagtgtag |
34866335 |
T |
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| Q |
117 |
ccggttttgcaagtgcttcaatacttatcgaatacgagattacttattcctattagaaatatataaagcaataaaaccttgtgctatgcaggagttacat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34866334 |
ccggttttgcaagtgcttcaatacttatcgaatacgagattacttattcctattagaaatatataaagcaataaaaccttgtgctatgcaggagttacat |
34866235 |
T |
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| Q |
217 |
tgcttttataaattacctgctggttctacagataaatattgatatatagttgaatgtgtctttcctctattcacagtaggggtttagtatcttatacaga |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
34866234 |
tgcttttataaattacctgctggttctacagataaatattgatatatagttgaacgtgtctttcctctattcacagtaggggtttagtatcgtatacaga |
34866135 |
T |
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| Q |
317 |
gttgaccattagtagcggttcat |
339 |
Q |
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|||||||||||||||||| |||| |
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| T |
34866134 |
gttgaccattagtagcgggtcat |
34866112 |
T |
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