View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10623_7 (Length: 303)
Name: NF10623_7
Description: NF10623
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10623_7 |
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Alignment Details
Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 4 - 280
Target Start/End: Original strand, 29006989 - 29007265
Alignment:
| Q |
4 |
aggagcagagagtctacaatcaaattctcaaattgagtatacagagtttactttgaactaaacaagttcatttgctaacaaacaaattcacagtagcaaa |
103 |
Q |
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| T |
29006989 |
aggagcaaagagtctacaatcaaattctcaaattgagtatacagagtttactttgaactaaacaagttcatttgctaacaaacaaattcacagtagcaaa |
29007088 |
T |
|
| Q |
104 |
gattctcacattagcaacacaagaacatcactcactttggaacaattgactaaagtcactaaaccaaatcacaatctatatgtactaaacaatatgccat |
203 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
29007089 |
gattctcacattagcaacacaagatcatcactcactttggaacaattgactaaagtcactaaaccaaatcacaatctatatgtactaaacaatatgtcat |
29007188 |
T |
|
| Q |
204 |
tataaatgaccaaacacccacatcagtgaaataaactgtctagtgtgagctagctagttgatagctgaaaggtgaac |
280 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29007189 |
tatgaatgaccaaacacccacatcagtgaaataaactgtctagtgtgagctagctagttgatagctgaaaggtgaac |
29007265 |
T |
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