View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10624_13 (Length: 317)
Name: NF10624_13
Description: NF10624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10624_13 |
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Alignment Details
Target: chr8 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 16386632 - 16386936
Alignment:
| Q |
1 |
gttttttcattattcattgagtttcttaagaatatttattttttggagtaagatctatatttttgatgactgaatcaattattattaataccatttattg |
100 |
Q |
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| T |
16386632 |
gttttttcattattcattgagtttcttaagaatatttattttttggagtaagatctatatttttgatgactgaatcaattattattaataccatttattg |
16386731 |
T |
|
| Q |
101 |
taattaaatatgataagctaaaaatgctgtcaatgactaaattttatctggttttaaagaattttattcatcaaaattattttataaactaattcaatta |
200 |
Q |
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| T |
16386732 |
taattaaatatgataagctaaaaatgctgtcaatgactaaattttatctggttttaaagaattttattcatcaaaattattttataaactaattcaatta |
16386831 |
T |
|
| Q |
201 |
ttttgcaatagtgtagacatgagaattattgttagtgaattatttgaaggctaacttttctggcttggtagatttgtattttatgagtaagtttaattta |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16386832 |
ttttgcaatagtgtagacatgagaattattgttagtgaattatttgaaggctaacttttctggcttggtagatttgtattttatgagtaagtttaattta |
16386931 |
T |
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| Q |
301 |
atttt |
305 |
Q |
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||||| |
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| T |
16386932 |
atttt |
16386936 |
T |
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