View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10624_2 (Length: 506)
Name: NF10624_2
Description: NF10624
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10624_2 |
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Alignment Details
Target: chr8 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 6 - 402
Target Start/End: Complemental strand, 37302673 - 37302282
Alignment:
| Q |
6 |
aagcatagggtaatggtgtgaagctaagaaaggggacaaaaaaggagcgatgggtccaaggttaattattttcttaataagacgggttggggtatctttc |
105 |
Q |
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| T |
37302673 |
aagcttagggtaatggtgtgaagctaagaaaggggacaaaaaaggagcgatgggtccaaggttaattattttcttaataagacgggttggggtatctttc |
37302574 |
T |
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| Q |
106 |
tttttgttannnnnnncctcttagtcgacagagatgaagtgagcatttagtgaggttgccggaggatatatgatcaattaaaagccaacttgacagatgg |
205 |
Q |
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| T |
37302573 |
tttttgttatttttttcctcttaga-gacagagatggagtgagcatttagtgaggttgccggaggatatatgatcaattaaaagccaacttgacagatgg |
37302475 |
T |
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| Q |
206 |
gaaaaggttattattggataattcgatattgctgttgaggtatcgtccactagaattgtatctcgtttataatgagtagaactgtactactgttcgaaga |
305 |
Q |
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| T |
37302474 |
gaaaaggttattattggataattcgatattgctgttgaggtatcgtccactagaattgtatctcgtttataatgagtagaactgtactactgttcgaaga |
37302375 |
T |
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| Q |
306 |
tcggtattatttggtgtagttaaacgtcataaatttaaga-aaaattgttatttggacgctcatacattttctgtatacattgagagagaaaaataat |
402 |
Q |
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| T |
37302374 |
tcggtattatttggtgcagttaaacgtcataaatttaagaaaaaaatgttatttggacgcttataca-----tatatacattgagagagaaaaataat |
37302282 |
T |
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