View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10625_high_53 (Length: 238)
Name: NF10625_high_53
Description: NF10625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10625_high_53 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 325812 - 326034
Alignment:
| Q |
16 |
ggatgaactagttttagtcaataaggattgtccttcaatgaaacacgtaattctttttacatgcatttacaaccatttaataaaaacttcagggcactgt |
115 |
Q |
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| T |
325812 |
ggatgaactagttttagtcaataaggattgtccttcaatgaaacacgtaattctttttacatgcatttacaaccatttaataaaaactttagggcactgt |
325911 |
T |
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| Q |
116 |
tatgacgtgaaagtagacgtaaagagtaaaaagggattgtggaaaaacactttaagaaaggaaaacactatactctagctaattttaattagttagtacc |
215 |
Q |
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| T |
325912 |
tatgacgtgaaagtagacgtaaagagtaaaaagggattgtggaaaaacactttaagaaaggaaaacactatactctagctaattttaaatagttagtacc |
326011 |
T |
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| Q |
216 |
ataatgacaaaaaagttgaccac |
238 |
Q |
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||||||||||||||||||||||| |
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| T |
326012 |
ataatgacaaaaaagttgaccac |
326034 |
T |
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