View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10625_high_65 (Length: 219)
Name: NF10625_high_65
Description: NF10625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10625_high_65 |
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Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-100; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 31350310 - 31350509
Alignment:
| Q |
1 |
ctttttaagggctaaaaccaatttaaaacattattagaccgtcttaaagagttttcaacaatagctaactactgtcgaaaaagctaaattgtagttaact |
100 |
Q |
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| T |
31350310 |
ctttttaagggctaaaaccaatttaaaacattattagaccgccttaaagagtgttcaacaatagctgactactgtcgaaaaagctaaattgtagttaact |
31350409 |
T |
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| Q |
101 |
atagttggttacgttttttaacaattttaaatgaagaaagtaagtctaataagcttttaagcaagcccaatattatgtgtattaaaattaggctcctgtt |
200 |
Q |
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| T |
31350410 |
atagttggttacgttttttaacaatttcaaatgaagaaagtaagtctaataagcttttaagcaagcccaatattatgtgtattaaaattaggctcctgtt |
31350509 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 119
Target Start/End: Original strand, 43094973 - 43095069
Alignment:
| Q |
23 |
ttaaaacattattagaccgtcttaaagagttttcaacaatagctaactactgtcgaaaaagctaaattgtagttaactatagttggttacgtttttt |
119 |
Q |
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| T |
43094973 |
ttaaaaaattattagaccattttaaaaagtgtctaactgtagttaactatagttgaaaaagttaaattgtagttaattatagttggatccgtttttt |
43095069 |
T |
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