View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10625_high_66 (Length: 217)
Name: NF10625_high_66
Description: NF10625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10625_high_66 |
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Alignment Details
Target: chr5 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 14 - 204
Target Start/End: Original strand, 13663088 - 13663276
Alignment:
| Q |
14 |
cagagaaataaccgctaattcttgctatactatactattgctagaattctaacctgtaaatgagaaattcaacagaagaataaaacagtaaacatgaaca |
113 |
Q |
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| T |
13663088 |
cagaaaaataaccgctaattcttgctatactatactattgcaagaattctaacctttaaatgagaaattcaacagaagaataaaacagtaaacatgaaca |
13663187 |
T |
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| Q |
114 |
tcaattctagagtnnnnnnnnnnnnnnnnnntcattccaacaagaaatgtaaatttacactaatgtagtttatatatgaatacatgatatt |
204 |
Q |
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| T |
13663188 |
tcaatcctagagt--aaaaaaaataaaaaaatcattctaacaaaaaatgtaaatttacactaatgtagtttatatatgaataaatgatatt |
13663276 |
T |
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