View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10625_low_14 (Length: 386)
Name: NF10625_low_14
Description: NF10625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10625_low_14 |
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Alignment Details
Target: chr1 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 55 - 368
Target Start/End: Original strand, 3482036 - 3482349
Alignment:
| Q |
55 |
catgtgcattaagaggtcaaatatgacaaaaatgtaagcaagcatgtgcattaagattattatatgtatactagttgtttattaatggaaactccacttt |
154 |
Q |
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| T |
3482036 |
catgtgcattaagaggtcaaatatgacaaaaatgtaagcaagcatgtgcattaagattattatatgtatactagttgtttattaatggaaactccacttt |
3482135 |
T |
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| Q |
155 |
tgaagctatttatggtagcagaaattgcataccaaccaaagtgaacatacaaagaaattgaaactatataacatagtaccttcttcagctgccaccaaat |
254 |
Q |
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| T |
3482136 |
tgaagctatttatggtagcaggaattgcataccaaccaaagtgaacatacaaagaaattgaaactatataacatagtaccttcttcagctgccaccaaat |
3482235 |
T |
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| Q |
255 |
gctaaattctgctgtattctcgtcaaggattgaaatctttgtcaacaaaataattattattaatgaaatgaaataagtatcatttaaccaaaaataaaat |
354 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3482236 |
gctaaattctgctgtattctcgtcaaggattgaaatctttgtcaacaaaataattattattaatgaaatgaaataagtatcatttaaccaaaaataaaat |
3482335 |
T |
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| Q |
355 |
gtagcctgtgtagt |
368 |
Q |
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|||||| ||||||| |
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| T |
3482336 |
gtagccggtgtagt |
3482349 |
T |
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