View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10625_low_38 (Length: 275)
Name: NF10625_low_38
Description: NF10625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10625_low_38 |
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Alignment Details
Target: chr3 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 52 - 264
Target Start/End: Original strand, 52576052 - 52576264
Alignment:
| Q |
52 |
ggaccaatggcaatacatattttcttctcnnnnnnngggagtgtatattttcactggttcagagtctgtagctcaagtttttctttaaaaaaggcagtgt |
151 |
Q |
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| T |
52576052 |
ggaccaatggtaatacatattttcttctcaaaaaaagggagtgtacattttcactggttcagagtctgtagctcaagtttttctttaaaaaaggcagtgt |
52576151 |
T |
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| Q |
152 |
accttcggacatgtttttgatcttagcgaggaaagtaatatatcacagtcctatacatcaacccattacgcatccatacagaacaaaggaagtgggatat |
251 |
Q |
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| T |
52576152 |
accttcggacatgtttttgatcttagcgaggaaagtaatatatcacagtcctatacatcaacccattacgcatccatacagaacaaaggaagtgggatat |
52576251 |
T |
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| Q |
252 |
acaactcattcat |
264 |
Q |
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| T |
52576252 |
acaactcattcat |
52576264 |
T |
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