View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10625_low_71 (Length: 233)

Name: NF10625_low_71
Description: NF10625
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10625_low_71
NF10625_low_71
[»] chr2 (25 HSPs)
chr2 (1-164)||(39221700-39221863)
chr2 (46-164)||(39390310-39390428)
chr2 (28-164)||(39390502-39390638)
chr2 (30-165)||(39451730-39451865)
chr2 (31-164)||(39137306-39137439)
chr2 (28-164)||(39222330-39222466)
chr2 (22-164)||(39192539-39192681)
chr2 (22-164)||(39198219-39198361)
chr2 (85-164)||(39390139-39390218)
chr2 (102-164)||(39136895-39136957)
chr2 (94-164)||(39415757-39415827)
chr2 (47-164)||(39602971-39603088)
chr2 (94-161)||(38792727-38792794)
chr2 (163-214)||(39221188-39221239)
chr2 (1-44)||(39222030-39222073)
chr2 (55-141)||(39603204-39603290)
chr2 (28-164)||(38793229-38793365)
chr2 (1-44)||(39222240-39222283)
chr2 (102-165)||(39451478-39451541)
chr2 (106-164)||(38792465-38792523)
chr2 (111-164)||(38792586-38792639)
chr2 (94-129)||(39415631-39415666)
chr2 (108-142)||(39222562-39222596)
chr2 (58-164)||(39415469-39415575)
chr2 (60-129)||(39390660-39390729)
[»] chr7 (1 HSPs)
chr7 (34-164)||(19807256-19807386)
[»] chr5 (3 HSPs)
chr5 (22-129)||(17059268-17059375)
chr5 (94-164)||(33560207-33560277)
chr5 (163-208)||(33560343-33560388)
[»] chr3 (1 HSPs)
chr3 (22-89)||(51574944-51575011)


Alignment Details
Target: chr2 (Bit Score: 160; Significance: 2e-85; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 39221863 - 39221700
Alignment:
Q  1 gattccagctgcttcgcctggccttcaaattgcctctcgtttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttca 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39221863 gattccagctgcttcgcctggccttcaaattgcctctcttttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttca 39221764  T
Q  101 tttggccttcaaattctctctcttttgatccatgctccttcacccagccttcatgttgcttctc 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39221763 tttggccttcaaattctctctcttttgatccatgctccttcacccagccttcatgttgcttctc 39221700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 46 - 164
Target Start/End: Original strand, 39390310 - 39390428
Alignment:
Q  46 ttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctctcttttgatccatgctccttcaccc 145  Q
    |||||||| |||||||||||||||||||||||||||   |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  39390310 ttgagctcctccacttggctttcaaaatgcttccttttagattccagttccttcatttggccttcaaattctctctcttttgatccatgctccttcactc 39390409  T
Q  146 agccttcatgttgcttctc 164  Q
     || |||||||||||||||    
T  39390410 ggctttcatgttgcttctc 39390428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 28 - 164
Target Start/End: Original strand, 39390502 - 39390638
Alignment:
Q  28 aattgcctctcgtttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctctcttttg 127  Q
    ||||||||||| | ||  |||||||| |||||||||||||||||||||||||||   |||||||  ||||||||||||||||||||||||||||||||||    
T  39390502 aattgcctctcttctgttttgagctcctccacttggctttcaaaatgcttccttttagattccagttccttcatttggccttcaaattctctctcttttg 39390601  T
Q  128 atccatgctccttcacccagccttcatgttgcttctc 164  Q
    || ||||||||||||| | || |||||||||||||||    
T  39390602 attcatgctccttcactcggctttcatgttgcttctc 39390638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 39451865 - 39451730
Alignment:
Q  30 ttgcctctcgtttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctctcttttgat 129  Q
    ||||||||| ||||| |||||||| |||||||||||||||||||||||| ||   ||||||| |||||||| || |||||||||||||||| ||||||||    
T  39451865 ttgcctctcttttgatttgagctcctccacttggctttcaaaatgcttctttttagattccagatccttcactttgccttcaaattctctcacttttgat 39451766  T
Q  130 ccatgctccttcacccagccttcatgttgcttctca 165  Q
     |||||||| |||||| ||| ||||||||| |||||    
T  39451765 tcatgctccatcacccggccctcatgttgcctctca 39451730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 39137439 - 39137306
Alignment:
Q  31 tgcctctcgtttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctctcttttgatc 130  Q
    |||||||| ||||| || ||||| ||||||||||||||||| |||||| ||   ||||| | |||| ||||||   |||||||||||||| ||||||||     
T  39137439 tgcctctcttttgatttaagctcctccacttggctttcaaactgcttcattttagattctagatccatcattttaacttcaaattctctcacttttgatt 39137340  T
Q  131 catgctccttcacccagccttcatgttgcttctc 164  Q
    |||||||| |||||| |||||||||||| |||||    
T  39137339 catgctccatcacccggccttcatgttgtttctc 39137306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 28 - 164
Target Start/End: Complemental strand, 39222466 - 39222330
Alignment:
Q  28 aattgcctctcgtttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctctcttttg 127  Q
    ||||||||||| ||||| |||| ||| ||||||||  |||||||||||||| ||   |||||||  ||||||| ||||||||| ||| ||||||||||||    
T  39222466 aattgcctctcttttgatttgaactcctccacttgattttcaaaatgcttctttttggattccagttccttcagttggccttcgaatcctctctcttttg 39222367  T
Q  128 atccatgctccttcacccagccttcatgttgcttctc 164  Q
    ||  ||||||||||||   ||||||| ||||||||||    
T  39222366 atttatgctccttcacttggccttcaagttgcttctc 39222330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 39192539 - 39192681
Alignment:
Q  22 ccttcaaattgcctctcgtttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctct 121  Q
    ||||| |||||| |||| ||||| |||| ||| |||||||| |||| |||||||||| |||  ||||| |  ||||||| ||||||||| ||||||||||    
T  39192539 ccttctaattgcttctcttttgatttgaactcctccacttgacttttaaaatgcttctttctagattcaagttccttcacttggccttcgaattctctct 39192638  T
Q  122 cttttgatccatgctccttcacccagccttcatgttgcttctc 164  Q
    |||||||| || ||||||||||   | ||||||| ||||||||    
T  39192639 cttttgattcacgctccttcacttggacttcatgatgcttctc 39192681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 164
Target Start/End: Original strand, 39198219 - 39198361
Alignment:
Q  22 ccttcaaattgcctctcgtttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctct 121  Q
    ||||| |||||| |||| ||||| |||| ||| |||||||| |||| |||||||||| |||  ||||| |  ||||||| ||||||||| ||||||||||    
T  39198219 ccttctaattgcttctcttttgatttgaactcctccacttgacttttaaaatgcttctttctagattcaagttccttcacttggccttcgaattctctct 39198318  T
Q  122 cttttgatccatgctccttcacccagccttcatgttgcttctc 164  Q
    |||||||| || ||||||||||   | ||||||| ||||||||    
T  39198319 cttttgattcacgctccttcacttggacttcatgatgcttctc 39198361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 164
Target Start/End: Original strand, 39390139 - 39390218
Alignment:
Q  85 gattccaaatccttcatttggccttcaaattctctctcttttgatccatgctccttcacccagccttcatgttgcttctc 164  Q
    |||||||  |||||||||||||||||||| ||||||||||| ||| ||||||||||||| | || |||||||||||||||    
T  39390139 gattccagttccttcatttggccttcaaaatctctctctttggattcatgctccttcactcggctttcatgttgcttctc 39390218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 39136957 - 39136895
Alignment:
Q  102 ttggccttcaaattctctctcttttgatccatgctccttcacccagccttcatgttgcttctc 164  Q
    ||||| |||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  39136957 ttggctttcaaattctctctcttttgatgcatgctccttcacccggccttcatgctgcttctc 39136895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 39415757 - 39415827
Alignment:
Q  94 tccttcatttggccttcaaattctctctcttttgatccatgctccttcacccagccttcatgttgcttctc 164  Q
    |||||||  ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||    
T  39415757 tccttcacctggccttcaaattctctctcttttgatgcatgctcattcacccggccttcatgctgcttctc 39415827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 164
Target Start/End: Complemental strand, 39603088 - 39602971
Alignment:
Q  47 tgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctctcttttgatccatgctccttcaccca 146  Q
    ||||||| ||||| |||||||||||||||||| ||   |||||||  ||| ||| |||||||||||| ||||| ||||||||| |||||||||||| ||     
T  39603088 tgagctcctccacatggctttcaaaatgcttctttttagattccagctccgtcacttggccttcaaactctctttcttttgattcatgctccttcaaccg 39602989  T
Q  147 gccttcatgttgcttctc 164  Q
     | |||||||| ||||||    
T  39602988 actttcatgtttcttctc 39602971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 38792794 - 38792727
Alignment:
Q  94 tccttcatttggccttcaaattctctctcttttgatccatgctccttcacccagccttcatgttgctt 161  Q
    ||||||| ||| |||||||||||||||||||||||| | ||||||||||||| |||||||| ||||||    
T  38792794 tccttcacttgaccttcaaattctctctcttttgattcgtgctccttcacccggccttcatattgctt 38792727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 163 - 214
Target Start/End: Complemental strand, 39221239 - 39221188
Alignment:
Q  163 tcaaattccttctccttagattcatgctctttcaatcgaccttcaaattcct 214  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  39221239 tcaagttccttctcctttgattcatgctccttcaatcgaccttcaaattcct 39221188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39222073 - 39222030
Alignment:
Q  1 gattccagctgcttcgcctggccttcaaattgcctctcgtttga 44  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  39222073 gattccagctgcttcgcctggccttcaaattgcctctcttttga 39222030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 39603290 - 39603204
Alignment:
Q  55 tccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctctcttttgatccatgctccttc 141  Q
    |||||||||||||||||||||||| ||   |||||||  ||||||  |||   |||||||||||||||||||||| |||||||||||    
T  39603290 tccacttggctttcaaaatgcttctttttagattccagctccttcgcttgaatttcaaattctctctcttttgattcatgctccttc 39603204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 28 - 164
Target Start/End: Complemental strand, 38793365 - 38793229
Alignment:
Q  28 aattgcctctcgtttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctctcttttg 127  Q
    |||||| |||| || || |||||||| || || ||||||||||||||| || ||   || ||||  |||| || ||  ||||||||||||||  |||||     
T  38793365 aattgcatctctttggatttgagctcctctacctggctttcaaaatgcatctttttagactccagctcctccactttaccttcaaattctctagctttta 38793266  T
Q  128 atccatgctccttcacccagccttcatgttgcttctc 164  Q
    || |||||||||||||||  |||||||||||||||||    
T  38793265 attcatgctccttcacccgaccttcatgttgcttctc 38793229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 39222283 - 39222240
Alignment:
Q  1 gattccagctgcttcgcctggccttcaaattgcctctcgtttga 44  Q
    ||||||||||||||||||||||||||||||| |||||| |||||    
T  39222283 gattccagctgcttcgcctggccttcaaattccctctcttttga 39222240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 165
Target Start/End: Complemental strand, 39451541 - 39451478
Alignment:
Q  102 ttggccttcaaattctctctcttttgatccatgctccttcacccagccttcatgttgcttctca 165  Q
    |||||||||||| ||||| ||||||||| |||||||||||| || || |||| |||||||||||    
T  39451541 ttggccttcaaactctctttcttttgattcatgctccttcaaccggctttcaagttgcttctca 39451478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 38792523 - 38792465
Alignment:
Q  106 ccttcaaattctctctcttttgatccatgctccttcacccagccttcatgttgcttctc 164  Q
    |||||||||||||||  ||||||| |||||||||||||||  |||||||| ||||||||    
T  38792523 ccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctc 38792465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 164
Target Start/End: Complemental strand, 38792639 - 38792586
Alignment:
Q  111 aaattctctctcttttgatccatgctccttcacccagccttcatgttgcttctc 164  Q
    ||||||||||| ||||||| ||||||||| ||||  ||||||||||||||||||    
T  38792639 aaattctctcttttttgattcatgctcctccacctggccttcatgttgcttctc 38792586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 129
Target Start/End: Original strand, 39415631 - 39415666
Alignment:
Q  94 tccttcatttggccttcaaattctctctcttttgat 129  Q
    ||||||||||||||||||||||| ||||||||||||    
T  39415631 tccttcatttggccttcaaattccctctcttttgat 39415666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 39222596 - 39222562
Alignment:
Q  108 ttcaaattctctctcttttgatccatgctccttca 142  Q
    |||||||||||||||||||||| ||||||||||||    
T  39222596 ttcaaattctctctcttttgattcatgctccttca 39222562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 164
Target Start/End: Original strand, 39415469 - 39415575
Alignment:
Q  58 acttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctctcttttgatccatgctccttcacccagccttcatgtt 157  Q
    ||||| |||||||| |||||| ||   |||||||  ||| ||| ||||| || ||||||||||||||||||| ||  |||||||||    ||||||||||    
T  39415469 acttgtctttcaaattgcttctttttagattccagctccctcacttggcttttaaattctctctcttttgattcacactccttcacttgaccttcatgtt 39415568  T
Q  158 gcttctc 164  Q
    |||||||    
T  39415569 gcttctc 39415575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 129
Target Start/End: Original strand, 39390660 - 39390729
Alignment:
Q  60 ttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctctcttttgat 129  Q
    |||||||||||||||||||  |  ||||  ||||||| ||||||||| |||||||||  |||||||||||    
T  39390660 ttggctttcaaaatgcttctgttttgatagcaaatccatcatttggcattcaaattccttctcttttgat 39390729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 34 - 164
Target Start/End: Complemental strand, 19807386 - 19807256
Alignment:
Q  34 ctctcgtttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctctcttttgatccat 133  Q
    ||||| ||||| || ||||| |||||||||||||||||  ||||| ||   |||| |   ||| ||||||||| |||||||||||||||||||||| |||    
T  19807386 ctctcttttgatttaagctcctccacttggctttcaaacagcttctttttagattgctgctccatcatttggctttcaaattctctctcttttgatgcat 19807287  T
Q  134 gctccttcacccagccttcatgttgcttctc 164  Q
    ||||||||| || ||||||||| ||||||||    
T  19807286 gctccttcatccggccttcatgctgcttctc 19807256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 17059375 - 17059268
Alignment:
Q  22 ccttcaaattgcctctcgtttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattccaaatccttcatttggccttcaaattctctct 121  Q
    ||||| ||||||||||| ||||| |||||||| ||||||||| | ||||||| |||  ||   |||||||  ||||||| | ||||||||||||| ||||    
T  17059375 ccttccaattgcctctcttttgatttgagctcctccacttggatatcaaaatccttttttttagattccagctccttcactaggccttcaaattcactct 17059276  T
Q  122 cttttgat 129  Q
    ||||||||    
T  17059275 cttttgat 17059268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 164
Target Start/End: Complemental strand, 33560277 - 33560207
Alignment:
Q  94 tccttcatttggccttcaaattctctctcttttgatccatgctccttcacccagccttcatgttgcttctc 164  Q
    ||||||||||||  |||||| ||  ||||||||||| ||  ||||||||||| ||||||||||||| ||||    
T  33560277 tccttcatttggttttcaaaatccttctcttttgattcaaactccttcacccggccttcatgttgcatctc 33560207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 33560388 - 33560343
Alignment:
Q  163 tcaaattccttctccttagattcatgctctttcaatcgaccttcaa 208  Q
    ||||||||||||||||| || |||||||| |||||||| |||||||    
T  33560388 tcaaattccttctcctttgactcatgctcattcaatcggccttcaa 33560343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 51575011 - 51574944
Alignment:
Q  22 ccttcaaattgcctctcgtttgacttgagctcgtccacttggctttcaaaatgcttccttcctgattc 89  Q
    |||||||||||  |||| ||||| ||||| || | |||||||||||||||||||||| || |||||||    
T  51575011 ccttcaaattgtttctcttttgatttgagttccttcacttggctttcaaaatgcttcttttctgattc 51574944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University