View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1062_low_3 (Length: 510)

Name: NF1062_low_3
Description: NF1062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1062_low_3
NF1062_low_3
[»] chr7 (50 HSPs)
chr7 (12-375)||(42331809-42332192)
chr7 (19-145)||(32873738-32873864)
chr7 (16-145)||(11321851-11321980)
chr7 (16-145)||(3922669-3922798)
chr7 (16-145)||(10932523-10932652)
chr7 (16-145)||(36769535-36769664)
chr7 (16-145)||(40753155-40753284)
chr7 (16-145)||(47953190-47953319)
chr7 (29-145)||(329470-329586)
chr7 (20-136)||(1870144-1870260)
chr7 (29-145)||(21784871-21784987)
chr7 (38-145)||(18470684-18470791)
chr7 (67-145)||(18386525-18386603)
chr7 (67-145)||(46633697-46633775)
chr7 (16-145)||(26371775-26371904)
chr7 (16-145)||(47316664-47316793)
chr7 (29-145)||(26994204-26994320)
chr7 (29-145)||(29661323-29661439)
chr7 (29-125)||(41211179-41211275)
chr7 (29-145)||(44748695-44748811)
chr7 (39-118)||(41665564-41665643)
chr7 (67-145)||(9913525-9913603)
chr7 (67-145)||(9927213-9927291)
chr7 (38-136)||(43189230-43189328)
chr7 (16-145)||(43158652-43158781)
chr7 (38-145)||(30849234-30849341)
chr7 (16-145)||(20127289-20127418)
chr7 (16-145)||(38301343-38301471)
chr7 (16-136)||(30598974-30599094)
chr7 (81-145)||(47947760-47947824)
chr7 (29-145)||(48445521-48445637)
chr7 (15-145)||(15035218-15035348)
chr7 (71-145)||(26652866-26652940)
chr7 (71-145)||(34295425-34295499)
chr7 (436-481)||(42331700-42331748)
chr7 (72-125)||(21133392-21133445)
chr7 (60-145)||(22631738-22631823)
chr7 (29-118)||(23349270-23349359)
chr7 (29-118)||(34519535-34519624)
chr7 (87-148)||(38360068-38360129)
chr7 (60-125)||(43213935-43214000)
chr7 (29-145)||(3892005-3892121)
chr7 (29-145)||(43368201-43368317)
chr7 (71-110)||(1363671-1363710)
chr7 (38-145)||(48894717-48894824)
chr7 (137-171)||(30260011-30260045)
chr7 (43-125)||(48699418-48699500)
chr7 (29-110)||(26910389-26910470)
chr7 (84-145)||(29992729-29992789)
chr7 (140-204)||(43214032-43214096)
[»] chr2 (51 HSPs)
chr2 (16-145)||(33366606-33366735)
chr2 (38-145)||(32497911-32498018)
chr2 (11-145)||(33889239-33889373)
chr2 (29-145)||(7761551-7761667)
chr2 (29-145)||(19513667-19513783)
chr2 (16-146)||(7258891-7259022)
chr2 (23-145)||(16104270-16104392)
chr2 (29-145)||(12939278-12939394)
chr2 (70-145)||(30326350-30326425)
chr2 (67-145)||(9717220-9717298)
chr2 (16-145)||(17540710-17540840)
chr2 (20-146)||(26418918-26419044)
chr2 (16-145)||(35114781-35114910)
chr2 (16-145)||(37308651-37308780)
chr2 (32-145)||(41934577-41934690)
chr2 (29-145)||(5278812-5278928)
chr2 (29-145)||(40832447-40832563)
chr2 (67-145)||(30798505-30798583)
chr2 (67-145)||(37003884-37003962)
chr2 (16-145)||(9732895-9733024)
chr2 (16-145)||(18685832-18685961)
chr2 (16-145)||(34338806-34338935)
chr2 (16-136)||(11114877-11114997)
chr2 (29-145)||(44284625-44284741)
chr2 (70-145)||(2086068-2086143)
chr2 (41-148)||(41366100-41366207)
chr2 (29-136)||(42365582-42365689)
chr2 (40-118)||(28824546-28824624)
chr2 (67-145)||(42706355-42706433)
chr2 (41-145)||(2645076-2645180)
chr2 (16-120)||(16177848-16177952)
chr2 (67-145)||(4641512-4641590)
chr2 (29-118)||(38993049-38993138)
chr2 (29-125)||(6896184-6896280)
chr2 (15-111)||(38623268-38623364)
chr2 (81-145)||(39461310-39461374)
chr2 (38-145)||(13829434-13829541)
chr2 (29-120)||(26981687-26981778)
chr2 (67-125)||(3913476-3913534)
chr2 (67-145)||(12672490-12672568)
chr2 (39-136)||(10399858-10399955)
chr2 (93-146)||(18793303-18793356)
chr2 (29-145)||(32766482-32766599)
chr2 (76-168)||(2394243-2394335)
chr2 (11-91)||(15303200-15303280)
chr2 (38-117)||(1247171-1247250)
chr2 (43-181)||(16062085-16062223)
chr2 (140-199)||(27462906-27462965)
chr2 (38-117)||(40692321-40692400)
chr2 (72-142)||(18127009-18127079)
chr2 (83-145)||(26796225-26796286)
[»] chr1 (59 HSPs)
chr1 (20-145)||(26764839-26764964)
chr1 (16-145)||(16386859-16386988)
chr1 (29-145)||(50382456-50382572)
chr1 (16-145)||(844764-844893)
chr1 (16-145)||(16437367-16437496)
chr1 (11-143)||(41972918-41973050)
chr1 (16-145)||(6711086-6711215)
chr1 (16-145)||(12890243-12890372)
chr1 (16-145)||(26118255-26118384)
chr1 (16-145)||(45490915-45491044)
chr1 (29-145)||(28340356-28340472)
chr1 (29-145)||(30105733-30105849)
chr1 (16-148)||(32289384-32289516)
chr1 (29-136)||(17887962-17888069)
chr1 (38-145)||(42510530-42510637)
chr1 (39-145)||(1351498-1351604)
chr1 (38-136)||(6029363-6029461)
chr1 (16-145)||(16451132-16451261)
chr1 (16-145)||(50540349-50540478)
chr1 (29-125)||(16704751-16704847)
chr1 (29-145)||(32270358-32270474)
chr1 (42-125)||(13994141-13994224)
chr1 (38-145)||(17327711-17327818)
chr1 (38-145)||(31004137-31004244)
chr1 (38-145)||(35387373-35387480)
chr1 (67-145)||(1601178-1601256)
chr1 (71-145)||(38663137-38663211)
chr1 (15-144)||(6771374-6771503)
chr1 (16-145)||(7183923-7184052)
chr1 (16-125)||(41967889-41967998)
chr1 (29-145)||(11772685-11772801)
chr1 (38-146)||(16476217-16476325)
chr1 (29-117)||(44738095-44738183)
chr1 (30-125)||(25539880-25539975)
chr1 (38-145)||(39281899-39282006)
chr1 (71-145)||(46154905-46154979)
chr1 (29-125)||(24339691-24339788)
chr1 (16-145)||(51264500-51264629)
chr1 (11-135)||(6144021-6144145)
chr1 (29-145)||(15539943-15540059)
chr1 (60-136)||(49303438-49303514)
chr1 (46-146)||(570390-570492)
chr1 (23-146)||(5109733-5109855)
chr1 (16-111)||(38087036-38087131)
chr1 (16-143)||(51703204-51703330)
chr1 (15-117)||(39792840-39792942)
chr1 (67-125)||(45658846-45658904)
chr1 (69-134)||(7837149-7837214)
chr1 (16-145)||(42512810-42512939)
chr1 (77-145)||(46447669-46447737)
chr1 (38-145)||(3414915-3415022)
chr1 (67-145)||(42705329-42705407)
chr1 (71-145)||(50304656-50304730)
chr1 (23-104)||(10384413-10384494)
chr1 (96-145)||(20495011-20495060)
chr1 (140-181)||(25343390-25343431)
chr1 (54-107)||(34283894-34283947)
chr1 (41-145)||(25343274-25343378)
chr1 (38-134)||(26733571-26733667)
[»] chr5 (43 HSPs)
chr5 (29-145)||(2351676-2351792)
chr5 (16-145)||(7523168-7523297)
chr5 (29-145)||(39918503-39918619)
chr5 (16-146)||(21739132-21739262)
chr5 (29-145)||(3735353-3735469)
chr5 (38-145)||(32528711-32528818)
chr5 (23-133)||(24036238-24036348)
chr5 (30-132)||(39788202-39788304)
chr5 (60-136)||(700616-700692)
chr5 (29-145)||(31770575-31770691)
chr5 (16-136)||(31880047-31880167)
chr5 (16-131)||(7770250-7770365)
chr5 (67-145)||(7208252-7208330)
chr5 (16-134)||(34794894-34795012)
chr5 (39-145)||(41790456-41790562)
chr5 (67-136)||(553402-553471)
chr5 (16-145)||(11963337-11963466)
chr5 (16-145)||(23091275-23091404)
chr5 (16-145)||(35701273-35701402)
chr5 (29-146)||(40489332-40489449)
chr5 (32-136)||(8560969-8561073)
chr5 (16-136)||(22493390-22493510)
chr5 (29-145)||(28090504-28090620)
chr5 (16-148)||(32092953-32093084)
chr5 (11-126)||(8136852-8136967)
chr5 (29-131)||(4689682-4689784)
chr5 (67-145)||(4818162-4818240)
chr5 (67-145)||(40182460-40182538)
chr5 (67-136)||(31644451-31644520)
chr5 (38-145)||(6284291-6284399)
chr5 (17-125)||(22432281-22432389)
chr5 (41-136)||(5598485-5598580)
chr5 (38-136)||(18470421-18470519)
chr5 (38-136)||(24181617-24181715)
chr5 (47-125)||(27839075-27839153)
chr5 (67-145)||(41459585-41459663)
chr5 (16-125)||(5571615-5571724)
chr5 (70-145)||(29241374-29241449)
chr5 (23-107)||(17031191-17031275)
chr5 (141-188)||(31644382-31644429)
chr5 (137-176)||(40563842-40563881)
chr5 (157-215)||(22432435-22432493)
chr5 (15-104)||(26180264-26180353)
[»] chr8 (50 HSPs)
chr8 (16-146)||(37618372-37618502)
chr8 (16-145)||(3251636-3251765)
chr8 (16-145)||(4052476-4052605)
chr8 (16-145)||(29563206-29563335)
chr8 (29-145)||(5968857-5968973)
chr8 (30-145)||(12753319-12753434)
chr8 (16-146)||(14005024-14005154)
chr8 (16-145)||(37664263-37664392)
chr8 (16-145)||(41709773-41709902)
chr8 (41-145)||(6386572-6386676)
chr8 (29-145)||(7394807-7394923)
chr8 (29-145)||(8673048-8673164)
chr8 (29-145)||(45446451-45446567)
chr8 (39-145)||(32303588-32303694)
chr8 (12-137)||(10656662-10656787)
chr8 (16-145)||(29672303-29672432)
chr8 (16-145)||(34063124-34063253)
chr8 (16-136)||(17805696-17805816)
chr8 (29-145)||(30543015-30543131)
chr8 (18-152)||(22756393-22756527)
chr8 (27-145)||(31732060-31732178)
chr8 (67-145)||(32020032-32020110)
chr8 (29-145)||(31513576-31513692)
chr8 (67-145)||(6460257-6460336)
chr8 (38-145)||(21272680-21272787)
chr8 (15-125)||(15001482-15001592)
chr8 (29-131)||(30501155-30501257)
chr8 (16-145)||(10467060-10467189)
chr8 (16-145)||(27103955-27104084)
chr8 (16-215)||(37861789-37861984)
chr8 (29-145)||(41548614-41548730)
chr8 (15-118)||(35225685-35225788)
chr8 (67-145)||(34101504-34101582)
chr8 (16-145)||(7591427-7591556)
chr8 (46-135)||(10320287-10320376)
chr8 (29-125)||(29611048-29611144)
chr8 (38-137)||(54175-54273)
chr8 (67-134)||(13406966-13407033)
chr8 (38-145)||(25478239-25478346)
chr8 (72-137)||(36426283-36426348)
chr8 (16-125)||(40389056-40389165)
chr8 (38-118)||(3800945-3801025)
chr8 (82-137)||(3361789-3361844)
chr8 (67-138)||(10932739-10932810)
chr8 (20-110)||(17520626-17520715)
chr8 (67-125)||(39642899-39642957)
chr8 (38-135)||(5892074-5892171)
chr8 (60-145)||(27109565-27109650)
chr8 (38-118)||(16595151-16595231)
chr8 (41-125)||(45114071-45114155)
[»] chr6 (35 HSPs)
chr6 (16-145)||(2614892-2615021)
chr6 (16-136)||(10324115-10324235)
chr6 (16-143)||(24203360-24203487)
chr6 (67-145)||(3932862-3932940)
chr6 (16-145)||(3259679-3259808)
chr6 (38-145)||(11279124-11279231)
chr6 (16-135)||(15277284-15277403)
chr6 (38-145)||(32409878-32409985)
chr6 (67-145)||(11382060-11382138)
chr6 (67-145)||(24242660-24242738)
chr6 (16-145)||(15276941-15277070)
chr6 (39-145)||(11613818-11613924)
chr6 (38-145)||(7396152-7396258)
chr6 (67-145)||(11212253-11212331)
chr6 (16-136)||(4494118-4494239)
chr6 (16-145)||(10485153-10485282)
chr6 (16-145)||(32132384-32132513)
chr6 (29-145)||(34176826-34176942)
chr6 (38-145)||(9902684-9902791)
chr6 (38-145)||(10959996-10960103)
chr6 (67-125)||(166978-167036)
chr6 (67-125)||(3379726-3379784)
chr6 (71-145)||(17867831-17867905)
chr6 (71-145)||(17877614-17877688)
chr6 (16-118)||(29054379-29054481)
chr6 (29-145)||(3290668-3290782)
chr6 (69-145)||(8177938-8178014)
chr6 (38-125)||(14925482-14925569)
chr6 (38-125)||(17443278-17443365)
chr6 (38-125)||(18057535-18057622)
chr6 (67-145)||(34684038-34684117)
chr6 (29-111)||(18597175-18597257)
chr6 (66-120)||(29202981-29203035)
chr6 (16-105)||(11675378-11675467)
chr6 (70-131)||(32860061-32860122)
[»] chr4 (68 HSPs)
chr4 (20-145)||(9512302-9512427)
chr4 (16-145)||(20802489-20802618)
chr4 (16-145)||(21580025-21580154)
chr4 (16-145)||(2725091-2725219)
chr4 (20-145)||(55593884-55594009)
chr4 (29-168)||(50729513-50729653)
chr4 (38-145)||(43641098-43641205)
chr4 (38-145)||(50727893-50728000)
chr4 (38-145)||(50735907-50736014)
chr4 (16-145)||(24210317-24210447)
chr4 (16-145)||(1231310-1231439)
chr4 (16-145)||(33176990-33177119)
chr4 (16-145)||(33552800-33552929)
chr4 (16-145)||(38486215-38486344)
chr4 (16-145)||(56154620-56154749)
chr4 (41-145)||(23521879-23521983)
chr4 (38-145)||(49152080-49152186)
chr4 (38-145)||(55065313-55065420)
chr4 (16-126)||(2629909-2630019)
chr4 (38-136)||(3649644-3649742)
chr4 (30-148)||(20694367-20694485)
chr4 (16-145)||(24002337-24002467)
chr4 (16-134)||(38812530-38812648)
chr4 (16-125)||(44324300-44324409)
chr4 (16-145)||(46680468-46680597)
chr4 (16-145)||(52319322-52319451)
chr4 (16-145)||(54542989-54543117)
chr4 (29-145)||(36885931-36886047)
chr4 (38-145)||(12600885-12600992)
chr4 (38-145)||(29785517-29785624)
chr4 (67-146)||(36743697-36743776)
chr4 (38-169)||(52673786-52673917)
chr4 (11-145)||(53200596-53200731)
chr4 (16-145)||(52949719-52949848)
chr4 (16-136)||(21202747-21202867)
chr4 (39-111)||(25978592-25978664)
chr4 (38-125)||(32181282-32181369)
chr4 (38-145)||(36497216-36497323)
chr4 (11-145)||(34929914-34930048)
chr4 (29-146)||(20517993-20518110)
chr4 (54-135)||(22318380-22318461)
chr4 (16-145)||(44649122-44649251)
chr4 (23-111)||(6776611-6776699)
chr4 (29-145)||(37865752-37865868)
chr4 (38-146)||(43739459-43739567)
chr4 (54-146)||(45577688-45577780)
chr4 (74-145)||(29616169-29616240)
chr4 (38-125)||(41711866-41711953)
chr4 (67-145)||(4325790-4325868)
chr4 (39-132)||(23327930-23328024)
chr4 (67-125)||(28115271-28115329)
chr4 (71-145)||(47642504-47642578)
chr4 (16-145)||(50178450-50178580)
chr4 (20-145)||(37695503-37695628)
chr4 (29-145)||(7001853-7001967)
chr4 (27-107)||(9947966-9948046)
chr4 (41-145)||(39078660-39078764)
chr4 (38-145)||(2786963-2787070)
chr4 (60-111)||(7554959-7555010)
chr4 (38-125)||(9807175-9807261)
chr4 (67-118)||(50186554-50186605)
chr4 (29-111)||(26083372-26083454)
chr4 (75-145)||(40792416-40792486)
chr4 (29-118)||(16320545-16320634)
chr4 (27-100)||(42772832-42772905)
chr4 (87-135)||(14296606-14296654)
chr4 (87-135)||(14314854-14314902)
chr4 (140-204)||(41720766-41720830)
[»] chr3 (46 HSPs)
chr3 (29-146)||(21221332-21221449)
chr3 (16-145)||(29584872-29585001)
chr3 (16-145)||(1344666-1344795)
chr3 (20-145)||(29646063-29646188)
chr3 (29-145)||(40094500-40094616)
chr3 (29-145)||(42636375-42636491)
chr3 (38-145)||(20609629-20609736)
chr3 (16-145)||(28675787-28675916)
chr3 (16-145)||(39052797-39052926)
chr3 (16-145)||(47958391-47958520)
chr3 (16-145)||(49748870-49748999)
chr3 (16-145)||(51259739-51259868)
chr3 (16-145)||(53557754-53557883)
chr3 (29-125)||(19906779-19906875)
chr3 (29-145)||(51925180-51925296)
chr3 (29-136)||(3864647-3864754)
chr3 (16-119)||(25860380-25860483)
chr3 (16-131)||(50678809-50678924)
chr3 (16-145)||(12349130-12349259)
chr3 (16-125)||(21373947-21374056)
chr3 (16-145)||(25927286-25927415)
chr3 (16-145)||(33364737-33364866)
chr3 (29-145)||(34026664-34026780)
chr3 (67-146)||(3695302-3695381)
chr3 (38-137)||(34351349-34351448)
chr3 (67-145)||(4851466-4851544)
chr3 (39-145)||(20255042-20255147)
chr3 (16-145)||(44116936-44117065)
chr3 (38-142)||(8648538-8648642)
chr3 (29-145)||(24571278-24571394)
chr3 (29-145)||(38213351-38213467)
chr3 (42-125)||(3964305-3964388)
chr3 (42-145)||(26282372-26282475)
chr3 (30-145)||(44000258-44000373)
chr3 (16-145)||(2135067-2135196)
chr3 (16-145)||(31882981-31883110)
chr3 (16-136)||(51296587-51296707)
chr3 (99-146)||(32621865-32621912)
chr3 (38-125)||(54622777-54622864)
chr3 (81-168)||(14155484-14155573)
chr3 (67-132)||(23322151-23322216)
chr3 (29-125)||(24721502-24721598)
chr3 (54-145)||(3867646-3867737)
chr3 (67-145)||(5442288-5442366)
chr3 (73-135)||(39215485-39215547)
chr3 (139-188)||(42547462-42547511)
[»] scaffold0169 (2 HSPs)
scaffold0169 (23-145)||(18032-18154)
scaffold0169 (38-145)||(12529-12636)
[»] scaffold0208 (1 HSPs)
scaffold0208 (16-136)||(2309-2429)
[»] scaffold0054 (2 HSPs)
scaffold0054 (16-126)||(23590-23700)
scaffold0054 (82-145)||(19903-19966)
[»] scaffold0014 (1 HSPs)
scaffold0014 (16-145)||(101945-102074)
[»] scaffold0181 (1 HSPs)
scaffold0181 (67-145)||(19112-19190)
[»] scaffold0027 (1 HSPs)
scaffold0027 (68-145)||(15168-15245)
[»] scaffold0650 (1 HSPs)
scaffold0650 (29-143)||(1627-1741)
[»] scaffold0004 (1 HSPs)
scaffold0004 (67-145)||(372986-373064)
[»] scaffold0098 (1 HSPs)
scaffold0098 (71-145)||(51435-51509)
[»] scaffold0729 (1 HSPs)
scaffold0729 (23-111)||(4557-4645)
[»] scaffold0360 (2 HSPs)
scaffold0360 (81-145)||(13615-13679)
scaffold0360 (67-125)||(15403-15461)
[»] scaffold0025 (1 HSPs)
scaffold0025 (29-131)||(5423-5526)
[»] scaffold0155 (1 HSPs)
scaffold0155 (54-143)||(33553-33642)
[»] scaffold0957 (1 HSPs)
scaffold0957 (69-145)||(2520-2595)
[»] scaffold0280 (1 HSPs)
scaffold0280 (41-125)||(13683-13767)
[»] scaffold0050 (1 HSPs)
scaffold0050 (29-125)||(42934-43029)


Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 12 - 375
Target Start/End: Complemental strand, 42332192 - 42331809
Alignment:
Q  12 agagacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtct 111  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| ||||| ||||||    
T  42332192 agagataggataaattggaggcaaatgacaggacaaaaacataaattctagttcttcaccaaaccacatcacaactttttgtctcacatacaaattgtct 42332093  T
Q  112 taaataccacaataatattttgtccatcaaaaattattcaacatcataaaaat-----ttgtcttatgttgttctactt----tgtgttttgctgttatg 202  Q
    |||||| || ||||| ||||| |||| |||||||||||||   ||||| ||||     ||||||| |||| ||||||||    |||| ||||||||| ||    
T  42332092 taaatatcaaaataacattttatccaccaaaaattattcacattcatacaaatcaaatttgtcttgtgttattctacttaatttgtgctttgctgttctg 42331993  T
Q  203 tccaatacttactttcattttctctaataaataggtgaacgttgagcaagatggattaaattaaa--ttttcctattggaagtgatttttagctaaatat 300  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |    
T  42331992 tccaatatttactttcattttctctaataaataggtgaacgatgagcaagatggattaaattaaattttttcctattggaagtgatttttagctaaatct 42331893  T
Q  301 gtgcggtcttcgtttactttgcacaagatgataactaattcg---------ttgtgaggattctttctttcactcttgaacccg 375  Q
    | ||||||||||||||||||| ||||||||||||||||||||         |||||||||||||||||||| ||||||||||||    
T  42331892 gagcggtcttcgtttactttgtacaagatgataactaattcgttgaggtaattgtgaggattctttctttctctcttgaacccg 42331809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 32873738 - 32873864
Alignment:
Q  19 ggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatac 118  Q
    ||||||| | |||||||  ||||||||||||||  | ||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  32873738 ggataaactggaggcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtctcacgtacaagttgtctgaaatac 32873837  T
Q  119 cacaataatattttgtccatcaaaaat 145  Q
    || ||||  ||||||||| ||||||||    
T  32873838 caaaatagcattttgtccctcaaaaat 32873864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 11321851 - 11321980
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  11321851 acaggacaaactggaggcaacggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 11321950  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  11321951 taccaaaatagcattttgtccctcaaaaat 11321980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 3922669 - 3922798
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||||| ||||||||||||| ||||||||||| || |||||||||||| ||| |||    
T  3922669 acaggacaaactggaggcaagggacaagacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttatctaaaa 3922768  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  3922769 taccaaaatagcattttgtccctcaaaaat 3922798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 10932523 - 10932652
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||| ||| ||||||||||| || |||||||||||||||| |||    
T  10932523 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttgtctaaaa 10932622  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  10932623 taccaaaatagcattttgtccctcaaaaat 10932652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 36769535 - 36769664
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  36769535 acaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 36769634  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||  ||||||||    
T  36769635 taccaaaatagcattttgtctctcaaaaat 36769664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 40753284 - 40753155
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | |||||||| |||| ||||||||||| || |||||||||||||||| |||    
T  40753284 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaa 40753185  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  40753184 taccaaaatagcattttgtccctcaaaaat 40753155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 47953319 - 47953190
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  47953319 acaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 47953220  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  47953219 taccaaaatagcattttgtccctcaaaaat 47953190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 329586 - 329470
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||| |||| |||||||||  ||||| |||| | ||||||||||||||||||||||||| || ||||||||||||| || ||| |||| ||||  |    
T  329586 gaggcaaaggacaagacaaaaactgaaatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgcctaaaacaccaaaatagca 329487  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  329486 ttttgtcccccaaaaat 329470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 1870260 - 1870144
Alignment:
Q  20 gataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatacc 119  Q
    |||||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| ||||| |    
T  1870260 gataaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatc 1870161  T
Q  120 acaataatattttgtcc 136  Q
    | ||||| |||||||||    
T  1870160 aaaataacattttgtcc 1870144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 21784987 - 21784871
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |    
T  21784987 gaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagca 21784888  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  21784887 ttttgtcctccaaaaat 21784871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 18470791 - 18470684
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| ||||   ||||||||||||| || |||||||| || |||||||||||||||| |||||||| ||||| |||||||||     
T  18470791 gacaggacaaaaactcatatttttgtctctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccc 18470692  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  18470691 tcaaaaat 18470684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 18386603 - 18386525
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  ||||||||| ||||||||    
T  18386603 tcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 18386525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 46633775 - 46633697
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  ||||||||| ||||||||    
T  46633775 tcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 46633697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 26371775 - 26371904
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | |||||||| |||| ||||||||||| || |||||||||||||||| |||    
T  26371775 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaa 26371874  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||| | ||||  ||||||||| ||||||||    
T  26371875 tactaaaatagcattttgtccctcaaaaat 26371904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 47316664 - 47316793
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| |||||| | |||||||||| ||     
T  47316664 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacatgcaagttgtctaaat 47316763  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  47316764 taccaaaatagcattttgtccctcaaaaat 47316793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 26994204 - 26994320
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||||||||||| |  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |    
T  26994204 gaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagca 26994303  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| | ||||||    
T  26994304 ttttgtccctaaaaaat 26994320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 29661439 - 29661323
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||| ||| |||||||| ||||  |    
T  29661439 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaagttatctaaaataccaaaatagca 29661340  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  29661339 ttttgtcccacaaaaat 29661323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 41211179 - 41211275
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||    
T  41211179 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaata 41211275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 44748811 - 44748695
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||| ||||||||  ||||| |||| | |||||||||||||  |||||||||| || |||||||||||||||| |||||||| ||||  |    
T  44748811 gaggcaagggacagaacaaaaactcaaatttttgtccctcaccaaaccacaatacaactttttgtcccacgtacaagttgtctaaaataccaaaatagca 44748712  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  44748711 ttttgtcccccaaaaat 44748695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 41665564 - 41665643
Alignment:
Q  39 acaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatac 118  Q
    |||||||||||||   |||| |||| | || |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  41665564 acaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaatac 41665643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 9913603 - 9913525
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||||||||||||||| || |||||||| ||||||| |||||||| ||||| |||| ||||  |||||||    
T  9913603 tcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaataacatttcgtcccccaaaaat 9913525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 9927291 - 9927213
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||||||||||||||| || |||||||| ||||||| |||||||| ||||| |||| ||||  |||||||    
T  9927291 tcaccaaaccacatcacaactttttttcccacgtacaggttgtctaaaataccaaaataacatttcgtcccccaaaaat 9927213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 43189230 - 43189328
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcc 136  Q
    |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || ||||||||||||||||  ||||||| |||| ||||||||||    
T  43189230 gacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctagaataccaaaatagtattttgtcc 43189328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 43158652 - 43158781
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | | ||||||||||| ||||||||||| || |||||||||||||||| |||    
T  43158652 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 43158751  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
     | || ||||  ||||||||| ||||||||    
T  43158752 catcaaaatagcattttgtccctcaaaaat 43158781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 30849234 - 30849341
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || ||  |||||||||| | |||||||| ||||| |||||||||     
T  30849234 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccatatacaagttgtataaaataccaaaataacattttgtccc 30849333  T
Q  138 tcaaaaat 145  Q
     |||||||    
T  30849334 ccaaaaat 30849341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 20127418 - 20127289
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||||||||||| |  | ||| |||||| ||| ||||||||||||||||||||| || ||||||||| |||| | |||    
T  20127418 acaggacaaactggaggcaagggacaggacaaaagctgatatttttgttcctcagcaaaccacatcacaactttttgtcccacgtacaatttgtgtaaaa 20127319  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||| | |||| ||||  |||||||    
T  20127318 taccaaaatgacatttcgtcccccaaaaat 20127289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 38301471 - 38301343
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||| ||||||||| ||||||||||| || |||| ||||||||||| |||    
T  38301471 acaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacg-acaagttgtctaaaa 38301373  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||| |||||||||  |||||||    
T  38301372 tatcaaaataacattttgtcccccaaaaat 38301343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 30598974 - 30599094
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||||||||||| |  | ||| |||| | ||| ||||||||| ||||||||||| ||||| |||||| || ||| |||    
T  30598974 acaggacaaactggaggcaagggacaggacaaaagctcatatttttgtccctcatcaaaccacaacacaactttttgtctcaagtacaaattatctaaaa 30599073  T
Q  116 taccacaataatattttgtcc 136  Q
    ||||| ||||| |||||||||    
T  30599074 taccaaaataacattttgtcc 30599094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 47947824 - 47947760
Alignment:
Q  81 cacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||| || |||||||||||||||| |||||||| ||||  ||||||||| ||||||||    
T  47947824 cacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 47947760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 48445637 - 48445521
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||| |||||||||  ||||| |||| |||||||||| ||||  |||||||||| |||| | |||||||||||| ||| || | ||||| |    
T  48445637 gaggcaagggacatgacaaaaactgaaatttttgtccttcaccaaatcacaggacaactttttgtctcgcatacaagttgtctaaaacacgaaaataaca 48445538  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  48445537 ttttgtcccccaaaaat 48445521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 15035218 - 15035348
Alignment:
Q  15 gacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaa 114  Q
    ||||||| ||| | || ||||| |||||||| ||||   ||||| |||||| |||||| |||||| ||||||||||| |  ||| ||||| |||||| ||    
T  15035218 gacaggacaaactggaagcaaaggacaggacgaaaattgaaattcttgttcctcaccagaccacaacacaactttttgtaccacatacaaattgtctaaa 15035317  T
Q  115 ataccacaataatattttgtccatcaaaaat 145  Q
    ||| || ||||| |||||| ||| |||||||    
T  15035318 atatcaaaataacattttgcccaccaaaaat 15035348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 26652940 - 26652866
Alignment:
Q  71 caaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||| ||||||||||| || |||||||||||||||| ||||| || ||||  |||||||||  |||||||    
T  26652940 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccgccaaaaat 26652866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 34295425 - 34295499
Alignment:
Q  71 caaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||| ||||||||||| || |||||||||||||||| ||||| || ||||  |||||||||  |||||||    
T  34295425 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaat 34295499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 42331748 - 42331700
Alignment:
Q  436 ctctatttctaccctttaccttg---tattagattagagtaccattttg 481  Q
    |||||||||||||||||||||||   |||||||||||||||||||||||    
T  42331748 ctctatttctaccctttaccttgtactattagattagagtaccattttg 42331700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 21133445 - 21133392
Alignment:
Q  72 aaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||||||||||||||| |||||| ||||| |||||| |||||||| ||||    
T  21133445 aaaccacatcacaactttttgtctcacatacaaattgtctaaaataccaaaata 21133392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 145
Target Start/End: Complemental strand, 22631823 - 22631738
Alignment:
Q  60 ttgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||| ||||||||||||||| || |||||||| |   ||||||||||||||| |||||||| ||| |||||| ||||  |||||||    
T  22631823 ttgtccttcaccaaaccacaacataactttttgttatacgtacaagttgtctaaaataccaaaatgatatttcgtcccccaaaaat 22631738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 23349270 - 23349359
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatac 118  Q
    |||||||  ||||| ||||||||  | ||| |||| | ||||||||||||| ||||||||||| || ||| |||||||||||| ||||||    
T  23349270 gaggcaagggacagaacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaatac 23349359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 34519624 - 34519535
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatac 118  Q
    |||||||  ||||||||||||||   |||| |||| | || |||||||||| ||||||||||| || || ||||||||||||| ||||||    
T  34519624 gaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcccaggtacaagttgtctaaaatac 34519535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 38360129 - 38360068
Alignment:
Q  87 tttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaattat 148  Q
    ||||| |||||| |||||||||| | |||||| | |||||||||||||||| ||||||||||    
T  38360129 tttttgtctcacctacaagttgtttaaaatacaaaaataatattttgtccaacaaaaattat 38360068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 43213935 - 43214000
Alignment:
Q  60 ttgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||| ||||||||||||||| ||||||||||| || ||| |||||||||||  |||||||| ||||    
T  43213935 ttgtccttcaccaaaccacaacacaactttttgtcccacatacaagttgtcaaaaataccaaaata 43214000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 3892005 - 3892121
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| ||||   |||||||| |||| ||||||||||| ||  |||||||||||||||  ||||||| ||||  |    
T  3892005 gaggcaagggacaggacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcctacgtacaagttgtctagaataccaaaatagca 3892104  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||| | ||||||||    
T  3892105 ttttgttcctcaaaaat 3892121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 43368317 - 43368201
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||| ||||||||||  | ||| |||| | ||| ||||||||| ||||||||||| ||  ||||||||||||||| ||||| || ||||  |    
T  43368317 gaggcaagagacgggacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcctacgtacaagttgtctaaaatatcaaaatagca 43368218  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| || |||||    
T  43368217 ttttgtccctccaaaat 43368201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 110
Target Start/End: Complemental strand, 1363710 - 1363671
Alignment:
Q  71 caaaccacatcacaactttttctctcacgtacaagttgtc 110  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  1363710 caaaccacatcacaactttttgtctcacgtacaggttgtc 1363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 48894824 - 48894717
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| ||||  ||||| |||||||||||||||||||| || ||||||||| |  ||| |||  ||| ||||| |||||||||     
T  48894824 gacaggacaaaaactcatatttttgtcattcactaaaccacatcacaactttttgtcccacgtacaaatcatctaaaaatccaaaataacattttgtccc 48894725  T
Q  138 tcaaaaat 145  Q
     |||||||    
T  48894724 ccaaaaat 48894717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 30260011 - 30260045
Alignment:
Q  137 atcaaaaattattcaacatcataaaaatttgtctt 171  Q
    |||||||||||||||| ||||||||||||||||||    
T  30260011 atcaaaaattattcaatatcataaaaatttgtctt 30260045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 48699500 - 48699418
Alignment:
Q  43 gacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||||  ||||| |||| | |||| |||||||| ||||||| ||| |  |||||||||||||||| |||||||| ||||    
T  48699500 gacaaaaactgaaattcttgtccctcactaaaccacaacacaactatttgttccacgtacaagttgtctaaaataccaaaata 48699418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 26910389 - 26910470
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtc 110  Q
    |||||||  ||||||| ||||||   |||| |||| | || |||||||||| ||||||||||| || |||||||||||||||    
T  26910389 gaggcaagggacaggataaaaactgcaatttttgtccctcgccaaaccacaacacaactttttgtcacacgtacaagttgtc 26910470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 29992729 - 29992789
Alignment:
Q  84 aactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||||||| ||||||||||||||| ||| ||||| || |||||| ||||||||| |||||||    
T  29992729 aactttttgtctcacgtacaagttatctaaaata-caaaataattttttgtccaccaaaaat 29992789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 43214032 - 43214096
Alignment:
Q  140 aaaaattattcaacatcataaaaatttgtcttatgttgttctactttgtgttttgctgttatgtc 204  Q
    |||||| ||||||  ||||||||||||||| | || |||||||| ||||||| ||||||| ||||    
T  43214032 aaaaatgattcaatgtcataaaaatttgtcctgtgctgttctaccttgtgttgtgctgttttgtc 43214096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 33366735 - 33366606
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||||| ||||||||||||| |||||||||||||| ||| |||||||||||| |||    
T  33366735 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttctcccacatacaagttgtctaaaa 33366636  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||| ||||||||| ||||||||    
T  33366635 taccaaaataacattttgtccctcaaaaat 33366606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 32498018 - 32497911
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||||||| ||||| |||||||||     
T  32498018 gacaggacaaaaactcatatttttgtacctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcct 32497919  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  32497918 tcaaaaat 32497911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 33889373 - 33889239
Alignment:
Q  11 cagagacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtc 110  Q
    |||| |||||| ||| | |||||||  ||||||||||||||  | ||| || | | ||||||||||||||||||||||||| || |||||||||||||||    
T  33889373 cagatacaggacaaactggaggcaagggacaggacaaaaactcatatttttttccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtc 33889274  T
Q  111 ttaaataccacaataatattttgtccatcaaaaat 145  Q
    | |||||||| ||||| ||||||||| ||||||||    
T  33889273 taaaataccaaaataacattttgtccctcaaaaat 33889239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 7761551 - 7761667
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||  |    
T  7761551 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagca 7761650  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  7761651 ttttgtccctcaaaaat 7761667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 19513667 - 19513783
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||| ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |    
T  19513667 gaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagca 19513766  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  19513767 ttttgtccctcaaaaat 19513783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 7259022 - 7258891
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||    
T  7259022 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaa 7258923  T
Q  116 taccacaataata-ttttgtccatcaaaaatt 146  Q
    ||||| ||||| | |||||||| |||||||||    
T  7258922 taccaaaataacatttttgtccctcaaaaatt 7258891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 16104392 - 16104270
Alignment:
Q  23 aaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccaca 122  Q
    ||||| |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| |||||||||||| |||||| |||||||| |    
T  16104392 aaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaataccaaa 16104293  T
Q  123 ataatattttgtccatcaaaaat 145  Q
    |||  ||||||||| ||||||||    
T  16104292 atagcattttgtccctcaaaaat 16104270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 12939278 - 12939394
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||| |||||||||  | ||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||| | |||||| ||||| |    
T  12939278 gaggcaagggacatgacaaaaactgatatttttgtccttcaccaaaccacagcacaactttttatctcacgtacaagttgtctaagataccaaaataaca 12939377  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  12939378 ttttgtcccccaaaaat 12939394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 30326350 - 30326425
Alignment:
Q  70 ccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||| |||||||||| ||||||||    
T  30326350 ccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaat 30326425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 9717298 - 9717220
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| |||| |||||||||| ||||||||    
T  9717298 tcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaat 9717220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 17540840 - 17540710
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  17540840 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 17540741  T
Q  116 tacc-acaataatattttgtccatcaaaaat 145  Q
    |||| | |||| |||||||||| ||||||||    
T  17540740 taccaaaaatagtattttgtccctcaaaaat 17540710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 26419044 - 26418918
Alignment:
Q  20 gataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatacc 119  Q
    |||||||| ||||| |  |||| |||||||||  | ||| |||||| ||||||||||||| ||||||||||| || |||||||||||||||| |||||||    
T  26419044 gataaattggaggcgagggacatgacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatacc 26418945  T
Q  120 acaataatattttgtccatcaaaaatt 146  Q
    | ||||| ||||| |||  ||||||||    
T  26418944 aaaataacattttatcccccaaaaatt 26418918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 35114910 - 35114781
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||| ||||| || |||||||||||||||| |||    
T  35114910 acaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaa 35114811  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  35114810 taccaaaatagcattttgtccctcaaaaat 35114781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 37308780 - 37308651
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || ||||||||| |||||| |||    
T  37308780 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaa 37308681  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| |||| |||||||||| | ||||||    
T  37308680 taccaaaatagtattttgtccctaaaaaat 37308651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 145
Target Start/End: Complemental strand, 41934690 - 41934577
Alignment:
Q  32 gcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattt 131  Q
    ||||| |||| |||||||||  ||||| |||| |||||| |||||||| ||||||||||| ||  ||||| ||||||||| |||||||| ||||| ||||    
T  41934690 gcaaaagacaagacaaaaactgaaattcttgtacttcactaaaccacaacacaactttttgtcctacgtataagttgtctaaaataccaaaataacattt 41934591  T
Q  132 tgtccatcaaaaat 145  Q
    |||||| |||||||    
T  41934590 tgtccaccaaaaat 41934577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 5278812 - 5278928
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||| ||||| || |||||||||||||||| |||||||| ||||  |    
T  5278812 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaattttttgtcccacgtacaagttgtctaaaataccaaaatagca 5278911  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  5278912 ttttgtccttcaaaaat 5278928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 40832447 - 40832563
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| |||||||||||||| |||| |||||||| |||| ||    
T  40832447 gaggcaagggacaggacaaaaacggatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagtagtctaaaataccaaaatagta 40832546  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||| ||||  |||||||    
T  40832547 tttcgtcccccaaaaat 40832563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 30798505 - 30798583
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||||||||||||||| || |||||||||||| ||| |||||||| ||||  ||||||||| ||||||||    
T  30798505 tcaccaaaccacatcacaactttttatcccacgtacaagttatctaaaataccaaaatagcattttgtccctcaaaaat 30798583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 37003884 - 37003962
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| || ||||||||| |||||| |||||||| ||||| ||||||||| ||||||||    
T  37003884 tcaccaaaccacaacacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtccctcaaaaat 37003962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 9732895 - 9733024
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  9732895 acaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 9732994  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  ||||||||| ||||||||    
T  9732995 tatcaaaatagcattttgtccctcaaaaat 9733024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 18685961 - 18685832
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||| |||| |||||||||  | ||| ||||   ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  18685961 acaggacaaactggaggcaaaggacaagacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 18685862  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||  | ||||| ||||||||| ||||||||    
T  18685861 tattaaaataacattttgtccctcaaaaat 18685832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 34338935 - 34338806
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||  | ||||||||||||| ||||||||||| || |||| ||||||||||| |||    
T  34338935 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgaccctcaccaaaccacagcacaactttttgtcccacgcacaagttgtctaaaa 34338836  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  34338835 taccaaaatagcattttgtccctcaaaaat 34338806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 11114997 - 11114877
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||||||||||||   | ||| |||||| ||||||||||||||||||||||||| || |||| ||||||||||| |||    
T  11114997 acaggacaaactggaggcaagggacaggacaaaaaatcatatttttgttcctcaccaaaccacatcacaactttttgtcccacgcacaagttgtctaaaa 11114898  T
Q  116 taccacaataatattttgtcc 136  Q
    | ||| |||| ||||| ||||    
T  11114897 ttccaaaatagtatttcgtcc 11114877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 44284741 - 44284625
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||| |||||||||  | ||| |||| | |||| |||||||| ||||||||||| ||||||||||||||||||| ||||| || ||||  |    
T  44284741 gaggcaagggacaagacaaaaactcatatttttgtccctcactaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataacaaaatagca 44284642  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  44284641 ttttgtccctcaaaaat 44284625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 2086143 - 2086068
Alignment:
Q  70 ccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||  |||||||||| | ||||||||||||||||| |||||||| ||||| ||||||||| ||||||||    
T  2086143 ccaaaccacagtacaactttttgtttcacgtacaagttgtctgaaataccaaaataacattttgtccctcaaaaat 2086068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 41366100 - 41366207
Alignment:
Q  41 aggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatca 140  Q
    |||||||||||  ||||| |||| | ||||||||||||| ||||| ||||| |||||| |||||||||||| |||||||| ||||| ||| | ||||  |    
T  41366100 aggacaaaaactgaaatttttgtccctcaccaaaccacaacacaattttttgtctcacatacaagttgtctaaaataccaaaataacattgtatccacaa 41366199  T
Q  141 aaaattat 148  Q
    ||||||||    
T  41366200 aaaattat 41366207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 42365689 - 42365582
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||| |||||||||  | ||| |||| ||||| ||||||||| ||||||||||| | ||||| ||||||||||| |||||||| ||||| |    
T  42365689 gaggcaagggacaagacaaaaactcatatttttgtccttcatcaaaccacaacacaactttttatatcacggacaagttgtctaaaataccaaaataaca 42365590  T
Q  129 ttttgtcc 136  Q
    ||||||||    
T  42365589 ttttgtcc 42365582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 118
Target Start/End: Original strand, 28824546 - 28824624
Alignment:
Q  40 caggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatac 118  Q
    ||||||||||||  | ||| |||| | ||||||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  28824546 caggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatctcacgtgcaagttgtctaaaatac 28824624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 42706433 - 42706355
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| || ||| |||||||||||| |||||||| ||||  ||||||||| ||||||||    
T  42706433 tcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 42706355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 2645076 - 2645180
Alignment:
Q  41 aggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatca 140  Q
    |||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || ||| |||||||||||| |||||||| ||||  ||||||| | |||    
T  2645076 aggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgttcctca 2645175  T
Q  141 aaaat 145  Q
    |||||    
T  2645176 aaaat 2645180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 120
Target Start/End: Original strand, 16177848 - 16177952
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||||||| | |||||||  ||||||||| ||||  | ||| ||||   | ||||||||||| ||||||||||| ||||||||||||||||||| |||    
T  16177848 acaggataaactggaggcaatggacaggacataaactgatatttttgtcgcttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaa 16177947  T
Q  116 tacca 120  Q
    |||||    
T  16177948 tacca 16177952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 4641590 - 4641512
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| |||||| |||||||||| | |||||||| ||||  ||||||| | ||||||||    
T  4641590 tcaccaaaccacagcacaactttttgtctcacatacaagttgtttaaaataccaaaatagcattttgttcctcaaaaat 4641512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 38993049 - 38993138
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatac 118  Q
    |||||||  ||||||||||||||   |||| |||||| ||  ||||||||| ||||||||||| || |||||||||||||||| ||||||    
T  38993049 gaggcaagggacaggacaaaaactacaatttttgttcctcgtcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatac 38993138  T

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Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 6896280 - 6896184
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||  ||||||| ||||||  ||||| |||| | ||||||||| ||| ||||||||||| || |||||||||||||||| ||| |||| ||||    
T  6896280 gaggcaagggacaggataaaaactgaaatttttgtccctcaccaaacaacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaata 6896184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Original strand, 38623268 - 38623364
Alignment:
Q  15 gacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtct 111  Q
    ||||||| ||| |||||||||  || | |||||||||  ||||| |||| | ||||||||||||| ||||||||||| || ||| ||||||||||||    
T  38623268 gacaggacaaacttgaggcaatggaaaagacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccacatacaagttgtct 38623364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 39461374 - 39461310
Alignment:
Q  81 cacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||| ||||||||||||| ||||| |||||||| ||||  ||||||||| ||||||||    
T  39461374 cacaactttttatctcacgtacaagctgtctaaaataccaaaatagcattttgtccctcaaaaat 39461310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 13829541 - 13829434
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  ||||| |||| | |||| | |||||||||||||||||| || || ||||||||| ||| ||| |||| ||||  |||| ||||     
T  13829541 gacaggacaaaaactgaaatttttgtccatcactagaccacatcacaactttttgtcccaggtacaagttatctaaaacaccaaaatatcatttcgtccc 13829442  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  13829441 tcaaaaat 13829434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 26981687 - 26981778
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatacca 120  Q
    ||||||||||||| |||||||||  | ||| |||| | ||||||||||||| || |||||||| |   ||||||||||||||| ||||||||    
T  26981687 gaggcaaatgacatgacaaaaactcatatttttgtccctcaccaaaccacaacaaaactttttgttctacgtacaagttgtctaaaatacca 26981778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 3913476 - 3913534
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||||| ||||||||||| |  |||||||||||||||| |||||||| ||||    
T  3913476 tcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaataccaaaata 3913534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 12672490 - 12672568
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||| ||||| || || ||||||||||||| |||||||| ||||  |||||||||  |||||||    
T  12672490 tcaccaaaccacaacacaagtttttatcccaagtacaagttgtctaaaataccaaaatagcattttgtcctccaaaaat 12672568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 136
Target Start/End: Original strand, 10399858 - 10399955
Alignment:
Q  39 acaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcc 136  Q
    |||||||||||||  | ||| |||| |||||| |||||||| ||||||||||| ||||| ||| ||||||||| |||  ||| ||||  |||||||||    
T  10399858 acaggacaaaaactcatatttttgtccttcactaaaccacaacacaactttttgtctcatgtataagttgtctaaaaatccaaaatagcattttgtcc 10399955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 93 - 146
Target Start/End: Original strand, 18793303 - 18793356
Alignment:
Q  93 tctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaatt 146  Q
    ||||||||||||||||||| |||||||| ||||| |||||||||  ||||||||    
T  18793303 tctcacgtacaagttgtctaaaataccaaaataacattttgtcctccaaaaatt 18793356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 32766482 - 32766599
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaac-tttttctctcacgtacaagttgtcttaaataccacaataat 127  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| |||||| ||||| ||  ||||||| ||||||| |||||||| |||||     
T  32766482 gaggcaagggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaacttttttgtcctacgtacaggttgtctaaaataccaaaataac 32766581  T
Q  128 attttgtccatcaaaaat 145  Q
    |||| ||||  |||||||    
T  32766582 atttcgtcctccaaaaat 32766599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 2394335 - 2394243
Alignment:
Q  76 cacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaattattcaacatcataaaaatttgt 168  Q
    |||| ||||||||||| ||||| | | | ||||||| |||||| | |||| | ||||||||  |||||||||||||| ||||||||| |||||    
T  2394335 cacagcacaactttttatctcatgcatatgttgtctaaaatacaataatagttttttgtcctccaaaaattattcaatatcataaaattttgt 2394243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 15303200 - 15303280
Alignment:
Q  11 cagagacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaacttttt 91  Q
    ||||||||||| ||| | |||||||   ||| |||||||||||||||| |||| ||| | ||||| |||||||||||||||    
T  15303200 cagagacaggacaaactagaggcaagacacatgacaaaaacataaatttttgtcctttatcaaactacatcacaacttttt 15303280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 1247250 - 1247171
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaata 117  Q
    |||||||||||| |  | ||| |||| | ||||||||||||  ||||||||||| || |||||||||||||||| |||||    
T  1247250 gacaggacaaaatctcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaata 1247171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 181
Target Start/End: Original strand, 16062085 - 16062223
Alignment:
Q  43 gacaaaaacataaattattgttcttcaccaaaccacatcacaactttttc-tctcacgtacaagttgtcttaaataccacaataatattttgtccatcaa 141  Q
    |||||||||||||||| |||| | ||| ||||| ||   ||||||||||  || ||| ||||| |||||| ||||  || ||||| |||||||||| |||    
T  16062085 gacaaaaacataaattcttgtccctcatcaaactacgatacaacttttttgtcccacatacaa-ttgtctaaaatgacaaaataacattttgtccaccaa 16062183  T
Q  142 aaattattcaacatcataaaaatttgtcttatgttgttct 181  Q
    ||| ||||||| | |||||||||||||  | |||||||||    
T  16062184 aaaatattcaataccataaaaatttgttctgtgttgttct 16062223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 27462906 - 27462965
Alignment:
Q  140 aaaaattattcaacatcataaaaatttgtcttatgttgttctactttgtgttttgctgtt 199  Q
    |||||||||||||  ||||| ||||||||| | ||||||||||| ||||||| |||||||    
T  27462906 aaaaattattcaatgtcatataaatttgtcatgtgttgttctaccttgtgttgtgctgtt 27462965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 40692400 - 40692321
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaata 117  Q
    ||||||||||||||    ||| |||| | |||||||||||||  |||||||||| || |||||||||||||||| |||||    
T  40692400 gacaggacaaaaactcgtatttttgtccctcaccaaaccacagaacaactttttgtcccacgtacaagttgtctaaaata 40692321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 142
Target Start/End: Original strand, 18127009 - 18127079
Alignment:
Q  72 aaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaa 142  Q
    |||||||| ||||||||||| ||||| ||||||||| | | ||||| || |||||  ||||||||||||||    
T  18127009 aaaccacaacacaactttttgtctcaagtacaagttatgtaaaatagcaaaataacgttttgtccatcaaa 18127079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 26796286 - 26796225
Alignment:
Q  83 caactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||| || |||||||||||||||| |||||||| |||| | ||||||||| |||||||    
T  26796286 caactttttgtcacacgtacaagttgtctaaaatacca-aatagtcttttgtccaccaaaaat 26796225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 26764839 - 26764964
Alignment:
Q  20 gataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatacc 119  Q
    |||||| | |||||||| |||||||||||||| || ||| |||| | ||||| ||||||| ||||||||||| || |||||||||||||||| |||||||    
T  26764839 gataaactggaggcaaaggacaggacaaaaacttatatttttgtccctcaccgaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacc 26764938  T
Q  120 acaataatattttgtccatcaaaaat 145  Q
    | |||||||||| |||| ||||||||    
T  26764939 aaaataatatttcgtccctcaaaaat 26764964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 16386988 - 16386859
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||    
T  16386988 acaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 16386889  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  16386888 taccaaaatagcattttgtccctcaaaaat 16386859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 50382456 - 50382572
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  ||||| |||| ||||||||||||||| ||||||||||| || |||||||||||||||| ||| || | ||||| |    
T  50382456 gaggcaatggacaggacaaaaactgaaatttttgtccttcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacacaaaaataaca 50382555  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  50382556 ttttgtccctcaaaaat 50382572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 844764 - 844893
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  844764 acaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 844863  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  844864 taccaaaatagcattttgtccctcaaaaat 844893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 16437496 - 16437367
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||| ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  16437496 acaggacaaactagaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 16437397  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  ||||||||| ||||||||    
T  16437396 tatcaaaatagcattttgtccttcaaaaat 16437367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 41973050 - 41972918
Alignment:
Q  11 cagagacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtc 110  Q
    |||| |||||| ||| | |||||||  |||| |||||||||  | ||| |||| | |||||||||||||  |||||||||| ||||||||||||||||||    
T  41973050 cagatacaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacactacaactttttgtctcacgtacaagttgtc 41972951  T
Q  111 ttaaataccacaataatattttgtccatcaaaa 143  Q
    | |||||||| ||||| ||||||||| ||||||    
T  41972950 taaaataccaaaataacattttgtccctcaaaa 41972918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 6711086 - 6711215
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||| ||||| || |||||||||||||||| |||    
T  6711086 acaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaa 6711185  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  6711186 taccaaaatagcattttgtccctcaaaaat 6711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 12890372 - 12890243
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||||||| | |||||||  ||||||||||||||  | ||| |||| | ||| ||||||||| ||||||||||| || |||||||||||||||| | |    
T  12890372 acaggataaactggaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtcccacgtacaagttgtctaaga 12890273  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  12890272 taccaaaatagcattttgtccctcaaaaat 12890243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 26118255 - 26118384
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||| ||||||||||||||  | ||| |||| | |||||||| |||| ||||||||||| || |||||| ||||||||| |||    
T  26118255 acaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacgtaaaagttgtctaaaa 26118354  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  26118355 taccaaaatagcattttgtccctcaaaaat 26118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 45490915 - 45491044
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  45490915 acaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 45491014  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  45491015 taccaaaatagcattttgtccctcaaaaat 45491044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 28340356 - 28340472
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||| |||||||||  | ||| |||| | ||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||  |    
T  28340356 gaggcaagggacaagacaaaaactcatatttttgtccctcatcaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagca 28340455  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  28340456 ttttgtccctcaaaaat 28340472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 30105733 - 30105849
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| || |||||||| || |||||||||||||||| |||||||| ||||  |    
T  30105733 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtacaagttgtctaaaataccaaaatagca 30105832  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  30105833 ttttgtccctcaaaaat 30105849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 32289384 - 32289516
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||||| |||||||  |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| |  |||||||||||||| | |||    
T  32289384 acaggacaaattggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgtttaaaa 32289483  T
Q  116 taccacaataatattttgtccatcaaaaattat 148  Q
    ||||| ||||  ||||||||| |||||||||||    
T  32289484 taccaaaatagcattttgtccctcaaaaattat 32289516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 17888069 - 17887962
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | || |||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||| |    
T  17888069 gaggcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataaca 17887970  T
Q  129 ttttgtcc 136  Q
    ||||||||    
T  17887969 ttttgtcc 17887962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 42510637 - 42510530
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| ||||   ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |||||||||     
T  42510637 gacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 42510538  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  42510537 tcaaaaat 42510530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 1351498 - 1351604
Alignment:
Q  39 acaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccat 138  Q
    |||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  ||||||||  |    
T  1351498 acaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtctct 1351597  T
Q  139 caaaaat 145  Q
    |||||||    
T  1351598 caaaaat 1351604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 6029363 - 6029461
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcc 136  Q
    ||||||||||||||  ||||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| ||| |||| ||||| |||| ||||    
T  6029363 gacaggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtcc 6029461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 16451261 - 16451132
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| ||||   ||||||||||||| ||||||||||| || ||| |||||||||||| |||    
T  16451261 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaa 16451162  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  16451161 taccaaaatagcattttgtccctcaaaaat 16451132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 50540478 - 50540349
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||| ||||  | ||| |||| ||||| ||||||||| ||||||||||| || |||||||||||||||| |||    
T  50540478 acaggacaaactggaggcaagggacaggacataaactcatatttttgtccttcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 50540379  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  |||||||||  |||||||    
T  50540378 taccaaaatagcattttgtcccccaaaaat 50540349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 16704847 - 16704751
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||  |||| |||||||||||| ||| |||| | | ||||||||||||||||||| ||| |||||| |||||||||||| |||||||| ||||    
T  16704847 gaggcaagggacacgacaaaaacatatatttttgtcccttaccaaaccacatcacaactctttgtctcacatacaagttgtctaaaataccaaaata 16704751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 32270474 - 32270358
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || || ||||||||||||| ||||| || ||||  |    
T  32270474 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatatcaaaatagca 32270375  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  32270374 ttttgtccctcaaaaat 32270358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 42 - 125
Target Start/End: Original strand, 13994141 - 13994224
Alignment:
Q  42 ggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||  ||||| |||| | ||||||||||||| ||||||||||| ||||| ||||||||||||| |||||||| ||||    
T  13994141 ggacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtctcatgtacaagttgtctaaaataccaaaata 13994224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 17327711 - 17327818
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | |||||||| |||| ||||||||||| ||||| |||||| || ||| |||||||| |||||||||||||||     
T  17327711 gacaggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtctcatgtacaaattatctaaaataccaaaataatattttgtccc 17327810  T
Q  138 tcaaaaat 145  Q
     |||||||    
T  17327811 ccaaaaat 17327818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 31004244 - 31004137
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  |  || |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| |||| ||||| ||||     
T  31004244 gacaggacaaaaactgatgtttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagtatttcgtccc 31004145  T
Q  138 tcaaaaat 145  Q
     |||||||    
T  31004144 ccaaaaat 31004137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 35387373 - 35387480
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| |  |||||||||||||||| |||||||| ||||  ||||| |||     
T  35387373 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatagcattttatccc 35387472  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  35387473 tcaaaaat 35387480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 1601256 - 1601178
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| || ||| |||||||||||| |||||||| ||||  |||||||||| |||||||    
T  1601256 tcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaatagcattttgtccaccaaaaat 1601178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 38663211 - 38663137
Alignment:
Q  71 caaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||| ||||||||||| || |||||||||||||||| ||||| || ||||| ||||||||| ||||||||    
T  38663211 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaat 38663137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 6771503 - 6771374
Alignment:
Q  15 gacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaa 114  Q
    |||| |||||||| ||| |||  |||| |||||||||  ||||| ||||   |||| ||| |||| |||||||||||||| ||| ||||||||| || ||    
T  6771503 gacatgataaattagagacaagggacaagacaaaaactaaaattcttgtcactcactaaatcacaacacaactttttctcccacatacaagttgactaaa 6771404  T
Q  115 ataccacaataatattttgtccatcaaaaa 144  Q
    ||| || ||||||||||||||||| |||||    
T  6771403 atatcaaaataatattttgtccataaaaaa 6771374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 7184052 - 7183923
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | | ||||||||||| ||||||||||| ||  ||||||||||||||| |||    
T  7184052 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtcctacgtacaagttgtctaaaa 7183953  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    |||||  ||| |||||||||  ||||||||    
T  7183952 taccaatatagtattttgtctctcaaaaat 7183923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 41967889 - 41967998
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||| | | ||||||||||| ||||||||||| ||||||||||||||||||| |||    
T  41967889 acaggacaaactagaggcaagagacaagacaaaaactcatatttttgtcccttaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaa 41967988  T
Q  116 taccacaata 125  Q
    ||||| ||||    
T  41967989 taccaaaata 41967998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 11772685 - 11772801
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||| |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || ||| ||||| |||| |||||||||| |||| ||    
T  11772685 gaggcaaaggacaagacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacctacaaattgttttaaataccaaaatagta 11772784  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||| ||||  |||||||    
T  11772785 tttcgtcccccaaaaat 11772801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 16476217 - 16476325
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||| ||||||  | ||| |||| | ||||||||||||  ||||||||||| || |||||||||||||||| |||||||| ||||  |||||||||     
T  16476217 gacaggataaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 16476316  T
Q  138 tcaaaaatt 146  Q
     ||||||||    
T  16476317 ccaaaaatt 16476325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 44738095 - 44738183
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaata 117  Q
    |||||||  |||||||| |||||  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||||    
T  44738095 gaggcaagggacaggaccaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaata 44738183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 125
Target Start/End: Complemental strand, 25539975 - 25539880
Alignment:
Q  30 aggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||| |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || ||| |||||||||| |||||||||| ||||    
T  25539975 aggcaaaggacaagacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaata 25539880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 39282006 - 39281899
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | |||||||||||||  |||||||||| ||  ||||||||||||||| |||||||| ||||| |||| ||||     
T  39282006 gacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcctacgtacaagttgtctaaaataccaaaataacatttcgtcct 39281907  T
Q  138 tcaaaaat 145  Q
     |||||||    
T  39281906 ccaaaaat 39281899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 46154979 - 46154905
Alignment:
Q  71 caaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||| ||||||||||| || ||| |||||||||||| |||||||| ||||| ||||||||| ||||||||    
T  46154979 caaactacagcacaactttttgtcccacttacaagttgtctaaaataccaaaataacattttgtccttcaaaaat 46154905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 24339691 - 24339788
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaa-ccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||  ||||||||||||||  | ||| |||| | |||||||| ||||| ||||||||||| || |||||||||||||||| |||||||| ||||    
T  24339691 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaaccacaacacaactttttttcccacgtacaagttgtctaaaataccaaaata 24339788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 51264629 - 51264500
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||| | |||    
T  51264629 acaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttaaaa 51264530  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||| | ||||  ||||||||| | ||||||    
T  51264529 tactaaaatagcattttgtcctttaaaaat 51264500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 6144021 - 6144145
Alignment:
Q  11 cagagacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtc 110  Q
    |||||||| || ||| | |||||||  ||||||||||||||   |||| |||| | ||  ||||||||| |||||||||||||| |||||| ||||||||    
T  6144021 cagagacatgacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcggcaaaccacaacacaactttttctcccacgtagaagttgtc 6144120  T
Q  111 ttaaataccacaataatattttgtc 135  Q
    | ||| || | ||||| ||||||||    
T  6144121 taaaacacaaaaataacattttgtc 6144145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 15539943 - 15540059
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||||||||||| |  ||| | ||||  |||||||||||||| ||||||||||| ||  ||||| ||||||||| ||| |||| ||||| |    
T  15539943 gaggcaagagacaggacaaaacctgaaacttttgtctttcaccaaaccacagcacaactttttgtcatacgtagaagttgtctaaaacaccaaaataaca 15540042  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  15540043 ttttgtcccccaaaaat 15540059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 136
Target Start/End: Original strand, 49303438 - 49303514
Alignment:
Q  60 ttgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcc 136  Q
    |||| ||||||||||||||| ||||| ||||| ||  ||||||||||||||| |||||| | ||||| |||||||||    
T  49303438 ttgtccttcaccaaaccacagcacaattttttatcctacgtacaagttgtctaaaatactaaaataacattttgtcc 49303514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 570492 - 570390
Alignment:
Q  46 aaaaacataaattattgttcttcaccaaaccacat--cacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaa 143  Q
    ||||||| ||||| |||| | |||||||||||||   ||||||||||| |||| |||| ||||||||| ||||| || ||||| ||||| |||| |||||    
T  570492 aaaaacagaaatttttgtccctcaccaaaccacaatgcacaactttttgtctcgcgtataagttgtctaaaatatcaaaataacattttttccaccaaaa 570393  T
Q  144 att 146  Q
    |||    
T  570392 att 570390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 146
Target Start/End: Complemental strand, 5109855 - 5109733
Alignment:
Q  23 aaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccaca 122  Q
    ||||| |||||||  ||||||||||||||  |  || |||| | ||||||||||||||||||||||||| ||  | ||||||||||||| ||||  || |    
T  5109855 aaattggaggcaagggacaggacaaaaactcatgtttttgtccctcaccaaaccacatcacaactttttgtccaaagtacaagttgtctaaaat-gcaaa 5109757  T
Q  123 ataatattttgtccatcaaaaatt 146  Q
    |||| |||||||||  ||||||||    
T  5109756 ataacattttgtcccccaaaaatt 5109733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 111
Target Start/End: Original strand, 38087036 - 38087131
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtct 111  Q
    |||||||||| | || ||||  |||| |||||||||  | ||| |||| |||||| |||||||||||||||||||| || || |||||||||||||    
T  38087036 acaggataaaatggatgcaatggacatgacaaaaactcatatttttgtccttcactaaaccacatcacaactttttgtcccaagtacaagttgtct 38087131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 51703204 - 51703330
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||||||| |  ||||||  ||||| ||||||||  | ||| |||||| ||||||| ||||| ||||||||||| || ||| |||| ||||||| |||    
T  51703204 acaggataaactgaaggcaagggacagaacaaaaactcatatttttgttcctcaccaa-ccacaacacaactttttgtcccacctacatgttgtctaaaa 51703302  T
Q  116 taccacaataatattttgtccatcaaaa 143  Q
    ||| | ||||| ||||||||| ||||||    
T  51703303 tacaaaaataacattttgtccctcaaaa 51703330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 39792942 - 39792840
Alignment:
Q  15 gacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaa 114  Q
    |||| |||||||| ||| |||| || | ||||||||   ||||| |||| ||||||||||||||| |||||||| || | |||||||||| |||||| ||    
T  39792942 gacaagataaattggagacaaaagatatgacaaaaattgaaattcttgtccttcaccaaaccacaacacaacttgttgtttcacgtacaaattgtctaaa 39792843  T
Q  115 ata 117  Q
    |||    
T  39792842 ata 39792840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 45658904 - 45658846
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||||| ||||||||||| || ||| |||||||||| |||||||||| ||||    
T  45658904 tcaccaaaccacaacacaactttttgtcccacctacaagttgttttaaataccaaaata 45658846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 69 - 134
Target Start/End: Complemental strand, 7837214 - 7837149
Alignment:
Q  69 accaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgt 134  Q
    |||||| |||||||||||||||| ||||||  ||||||||||| ||||| || |||| ||||||||    
T  7837214 accaaatcacatcacaactttttgtctcacagacaagttgtctaaaatatcaaaatagtattttgt 7837149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 42512810 - 42512939
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||| ||||||||| ||||||||||| ||  |||||||| |||||| |||    
T  42512810 acaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcctacgtacaaattgtctaaaa 42512909  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  |||||||||  |||||||    
T  42512910 tatcaaaatagaattttgtcccccaaaaat 42512939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 46447737 - 46447669
Alignment:
Q  77 acatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||||| |  |||||||||||| ||| ||||| || |||| | |||||||||||||||||    
T  46447737 acatcacaactttttgttccacgtacaagttatctaaaatatcaaaatagtcttttgtccatcaaaaat 46447669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 3414915 - 3415022
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||| |||||| || ||||| || ||||||| |||||| | |||||||| ||||  |||||||||     
T  3414915 gacaggacaaaaactcatatttttgtccctcaccaaactacatcataattttttatcccacgtactagttgtttaaaataccaaaatagcattttgtccc 3415014  T
Q  138 tcaaaaat 145  Q
     |||||||    
T  3415015 ccaaaaat 3415022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 42705329 - 42705407
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||  || |||||||||||||||| ||||  || ||||  |||||||||  |||||||    
T  42705329 tcaccaaaccacaacacaacttttcgtcccacgtacaagttgtctgaaatgtcaaaatagcattttgtcccccaaaaat 42705407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 50304730 - 50304656
Alignment:
Q  71 caaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||| ||||||||||| ||||||||  ||||||||| ||||| || ||||  |||||||||  |||||||    
T  50304730 caaaccacagcacaactttttgtctcacgtttaagttgtctaaaatatcaaaatagcattttgtcctccaaaaat 50304656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 10384494 - 10384413
Alignment:
Q  23 aaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaa 104  Q
    ||||| || ||||| |||| |||||||||  | ||| |||| |||||| |||||||| ||||||||||| || |||||||||    
T  10384494 aaattggatgcaaaggacaagacaaaaactcatatttttgtccttcactaaaccacagcacaactttttgtcccacgtacaa 10384413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 20495011 - 20495060
Alignment:
Q  96 cacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||||||||||||||| |||||||| ||||  ||||||||| ||||||||    
T  20495011 cacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 20495060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Original strand, 25343390 - 25343431
Alignment:
Q  140 aaaaattattcaacatcataaaaatttgtcttatgttgttct 181  Q
    |||||||||||||  ||||||||||||||||| |||||||||    
T  25343390 aaaaattattcaatgtcataaaaatttgtcttgtgttgttct 25343431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 107
Target Start/End: Original strand, 34283894 - 34283947
Alignment:
Q  54 aaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagtt 107  Q
    ||||||||||  ||||  |||||||| ||||||||||| |||||||||||||||    
T  34283894 aaattattgtctttcaataaaccacaacacaactttttatctcacgtacaagtt 34283947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 25343274 - 25343378
Alignment:
Q  41 aggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatca 140  Q
    |||| ||||||| | ||| |||| |||||| |||||| |  |||||||||| || |||||||||||||||  |||  ||| |||| ||||| |||| |||    
T  25343274 aggataaaaacacatatttttgtccttcactaaaccatagtacaactttttgtcgcacgtacaagttgtccaaaaatccaaaatagtatttcgtccctca 25343373  T
Q  141 aaaat 145  Q
    |||||    
T  25343374 aaaat 25343378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 26733667 - 26733571
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgt 134  Q
    |||| |||||||||  ||||| |||| |  ||| |||||| | |||||||||||  |||| ||||||||||||| |||||||| |||| | ||||||    
T  26733667 gacatgacaaaaactgaaattcttgtcccccactaaaccataacacaactttttgcctcatgtacaagttgtctaaaataccaaaatagtcttttgt 26733571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 6e-26; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 2351792 - 2351676
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    ||||||| |||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||| |    
T  2351792 gaggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataaca 2351693  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  2351692 ttttgtccctcaaaaat 2351676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 7523297 - 7523168
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||    
T  7523297 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 7523198  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  7523197 taccaaaatagcattttgtccctcaaaaat 7523168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 39918619 - 39918503
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||| |    
T  39918619 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaataaca 39918520  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  39918519 ttttgtcccccaaaaat 39918503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 21739132 - 21739262
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  21739132 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 21739231  T
Q  116 taccacaataatattttgtccatcaaaaatt 146  Q
    ||||| ||||  ||||||||| |||||||||    
T  21739232 taccaaaatagcattttgtccctcaaaaatt 21739262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 3735469 - 3735353
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||| |    
T  3735469 gaggcaatggacaggacaaaaactgatatttttgtccatcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataaca 3735370  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  3735369 ttttgtcctccaaaaat 3735353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 32528818 - 32528711
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |||||||||     
T  32528818 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 32528719  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  32528718 tcaaaaat 32528711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 24036348 - 24036238
Alignment:
Q  23 aaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccaca 122  Q
    ||||| |||||||  |||||||||||| |  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||||||| |    
T  24036348 aaattggaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaataccaaa 24036249  T
Q  123 ataatattttg 133  Q
    |||| ||||||    
T  24036248 ataacattttg 24036238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 132
Target Start/End: Complemental strand, 39788304 - 39788202
Alignment:
Q  30 aggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatat 129  Q
    ||||||| ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||||| | ||||| ||    
T  39788304 aggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaatactaaaataacat 39788205  T
Q  130 ttt 132  Q
    |||    
T  39788204 ttt 39788202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 60 - 136
Target Start/End: Original strand, 700616 - 700692
Alignment:
Q  60 ttgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcc 136  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||||| ||| |||||||| |||| ||||||||||    
T  700616 ttgttcctcaccaaaccacaacacaactttttgtctcacgtacaagttatctaaaataccaaaatattattttgtcc 700692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 31770575 - 31770691
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| || | | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |    
T  31770575 gaggcaagggacaggacaaaaactcatatttttatccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctgaaataccaaaatagca 31770674  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  31770675 ttttgtccctcaaaaat 31770691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 31880047 - 31880167
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | ||||||| |||||||||||||||  | ||| |||| | ||||||||||||||||||||| ||| ||  ||||||||||||||| |||    
T  31880047 acaggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactatttgtcctacgtacaagttgtctaaaa 31880146  T
Q  116 taccacaataatattttgtcc 136  Q
    ||||| ||||  |||||||||    
T  31880147 taccaaaatagcattttgtcc 31880167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 7770250 - 7770365
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||| | ||| |||| ||||||||||||||| ||||||||||| || ||||||||||||| || |||    
T  7770250 acaggacaaactggaggcaagggacaggacaaaaacacatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaa 7770349  T
Q  116 taccacaataatattt 131  Q
    ||| | ||||| ||||    
T  7770350 tacaaaaataacattt 7770365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 7208252 - 7208330
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||  ||||||| | ||||||||    
T  7208252 tcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgttcctcaaaaat 7208330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 34795012 - 34794894
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||||| ||||||||| |||    
T  34795012 acaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtataagttgtctaaaa 34794913  T
Q  116 taccacaataatattttgt 134  Q
    ||||| ||||  |||||||    
T  34794912 taccaaaatagcattttgt 34794894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 41790456 - 41790562
Alignment:
Q  39 acaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccat 138  Q
    |||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| |||||||||||| |||||| |||||| | ||||| |||||||||      
T  41790456 acaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaaattgtctaaaatactaaaataacattttgtcccc 41790555  T
Q  139 caaaaat 145  Q
    |||||||    
T  41790556 caaaaat 41790562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 553471 - 553402
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcc 136  Q
    ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||| |||||||||    
T  553471 tcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtcc 553402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 11963466 - 11963337
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || ||||| |||||||||| |||    
T  11963466 acaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtgcaagttgtctaaaa 11963367  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  11963366 taccaaaatagcattttgtccctcaaaaat 11963337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 23091275 - 23091404
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||||||| | |||||||  |||| |||||||||  | ||| |||| | ||| ||||||||| ||||||||||| ||||||||| || |||||| |||    
T  23091275 acaggataaactggaggcaagggacaagacaaaaactcatatttttgtccgtcatcaaaccacaacacaactttttgtctcacgtataaattgtctaaaa 23091374  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||| ||||||||| ||||||||    
T  23091375 tatcaaaataacattttgtccctcaaaaat 23091404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 35701402 - 35701273
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| || |||||||| |  |||||||||||||||| |||    
T  35701402 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacataactttttgttccacgtacaagttgtctaaaa 35701303  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  35701302 taccaaaatagcattttgtccctcaaaaat 35701273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 40489449 - 40489332
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||| ||||||||||  | ||| |||| | |||||||| |||| ||||||||||| || ||| |||||||||||| |||||||| ||||| |    
T  40489449 gaggcaagggacgggacaaaaactcatatttttgtccctcaccaaatcacagcacaactttttgtcccacatacaagttgtctaaaataccaaaataaca 40489350  T
Q  129 ttttgtccatcaaaaatt 146  Q
    |||||||| |||||||||    
T  40489349 ttttgtccctcaaaaatt 40489332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 8560969 - 8561073
Alignment:
Q  32 gcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattt 131  Q
    ||||| |||| |||||||||  | ||| |||||| ||||||||||||||||||||||||| |  || ||||||||||||| |||||||| ||||| ||||    
T  8560969 gcaaaggacaagacaaaaactgatatttttgttcctcaccaaaccacatcacaactttttgttccaggtacaagttgtctaaaataccaaaataacattt 8561068  T
Q  132 tgtcc 136  Q
     ||||    
T  8561069 cgtcc 8561073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 22493390 - 22493510
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||||||| | ||| |||| |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  22493390 acaggataaactggagccaaaggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcacacgtacaagttgtctaaaa 22493489  T
Q  116 taccacaataatattttgtcc 136  Q
    || || ||||  |||||||||    
T  22493490 tatcaaaatagcattttgtcc 22493510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 28090504 - 28090620
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||| |||||||||  | ||| |||| | ||||||||| ||| ||||||||||| || |||||||||||||||| |||||| | ||||| |    
T  28090504 gaggcaagggacatgacaaaaactcatatttttgtccctcaccaaactacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaataaca 28090603  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  28090604 ttttgtccctcaaaaat 28090620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 32092953 - 32093084
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||||| |||||||| || |||||||||||  ||||| |||| || |||||||||||| ||||||||||| || ||||||||| || ||| |||    
T  32092953 acaggacaaattggaggcaaaggataggacaaaaactgaaatttttgtcct-caccaaaccacagcacaactttttgtcccacgtacaaattatctaaaa 32093051  T
Q  116 taccacaataatattttgtccatcaaaaattat 148  Q
    ||||| ||||  |||| ||||  ||||||||||    
T  32093052 taccaaaatagcatttcgtcccccaaaaattat 32093084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 8136967 - 8136852
Alignment:
Q  11 cagagacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtc 110  Q
    |||| |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||  ||||||||||||||    
T  8136967 cagatacaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcctacgtacaagttgtc 8136868  T
Q  111 ttaaataccacaataa 126  Q
    | |||||||| |||||    
T  8136867 taaaataccaaaataa 8136852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 4689682 - 4689784
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||| | ||| |||| | ||||||||||||| ||||||||||| || ||||||||||||| || |||||| | ||||| |    
T  4689682 gaggcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgcctaaaatacaaaaataaca 4689781  T
Q  129 ttt 131  Q
    |||    
T  4689782 ttt 4689784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 4818162 - 4818240
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  ||||||||| | ||||||    
T  4818162 tcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctaaaaaat 4818240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 40182538 - 40182460
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||||||||||||||| || || ||||||||||||| |||||||| ||||  ||||||||  ||||||||    
T  40182538 tcaccaaaccacatcacaactttttgtcccatgtacaagttgtctaaaataccaaaatagcattttgtctctcaaaaat 40182460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 31644520 - 31644451
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcc 136  Q
    ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |||||||||    
T  31644520 tcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcc 31644451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 6284291 - 6284399
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatacc-acaataatattttgtcc 136  Q
    |||||||||||||| ||  || |||| | ||||||||||||| ||||||||||| || |||||||||||||||  ||||||| | ||||  |||||||||    
T  6284291 gacaggacaaaaacttatttttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtccaaaataccaaaaatagcattttgtcc 6284390  T
Q  137 atcaaaaat 145  Q
     ||||||||    
T  6284391 ctcaaaaat 6284399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 22432281 - 22432389
Alignment:
Q  17 caggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaat 116  Q
    ||||||||| | |||||||  ||||||||||||||  | ||| |||| | ||| ||||||||| ||||| ||||| ||||| ||||||||||||| ||||    
T  22432281 caggataaactggaggcaagagacaggacaaaaactgatatttttgtccctcatcaaaccacaacacaattttttgtctcaagtacaagttgtctaaaat 22432380  T
Q  117 accacaata 125  Q
    |||| ||||    
T  22432381 accaaaata 22432389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 5598580 - 5598485
Alignment:
Q  41 aggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcc 136  Q
    |||||||||||| | ||| |||| ||||| ||||| ||| ||||||||||| |||||||||||| |||||| ||||| || ||||| |||| ||||    
T  5598580 aggacaaaaacagatatttttgtccttcatcaaacaacagcacaactttttgtctcacgtacaacttgtctaaaatatcaaaataacatttcgtcc 5598485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 18470421 - 18470519
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcc 136  Q
    |||| |||||||||  ||||| |||| | | ||||||||||| ||||||||||| || |||||||||||||||| ||| |||| ||||| |||| ||||    
T  18470421 gacaagacaaaaactgaaatttttgtcccttaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaacaccaaaataacatttcgtcc 18470519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 38 - 136
Target Start/End: Original strand, 24181617 - 24181715
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcc 136  Q
    ||||||||||||||  | ||| |||| | ||||||||||||| || |||||||| || |||||| ||||||||| |||||||| ||||  |||||||||    
T  24181617 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcataactttttgtcccacgtataagttgtctaaaataccaaaatagcattttgtcc 24181715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 27839075 - 27839153
Alignment:
Q  47 aaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||||||| |||| | ||||||||||| |  |||||||||| ||||| ||||||||||||| |||||||| ||||    
T  27839075 aaaacataaatttttgtccctcaccaaaccataaaacaactttttgtctcatgtacaagttgtctaaaataccaaaata 27839153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 41459663 - 41459585
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||| | ||||||||||| |  |||||||||||||||| ||||| || ||||| ||||||||| ||||||||    
T  41459663 tcaccaaaccagagcacaactttttgttccacgtacaagttgtctaaaatatcaaaataacattttgtccctcaaaaat 41459585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 5571615 - 5571724
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||||||||||||   | ||| |||| | ||||||||||||| ||||||||||| ||  ||||||||||||||| |||    
T  5571615 acaggacaaactggaggcaagggacaggacaaaaattcatatttttgtccctcaccaaaccacaacacaactttttgtccaacgtacaagttgtctaaaa 5571714  T
Q  116 taccacaata 125  Q
    ||||| ||||    
T  5571715 taccaaaata 5571724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 145
Target Start/End: Complemental strand, 29241449 - 29241374
Alignment:
Q  70 ccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||||||||| ||||||||||| || ||||||||||||| || ||||| || ||||  ||||||||| ||||||||    
T  29241449 ccaaaccacagcacaactttttgtcccacgtacaagttggctaaaatatcaaaatagcattttgtccctcaaaaat 29241374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 23 - 107
Target Start/End: Complemental strand, 17031275 - 17031191
Alignment:
Q  23 aaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagtt 107  Q
    ||||| |||||||| ||||||||||||||||||||| |||  | |||  ||| |||| ||||||||||  || ||||||||||||    
T  17031275 aaattggaggcaaaggacaggacaaaaacataaatttttgcccctcattaaatcacagcacaacttttcgtcccacgtacaagtt 17031191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 31644429 - 31644382
Alignment:
Q  141 aaaattattcaacatcataaaaatttgtcttatgttgttctactttgt 188  Q
    ||||||||||||  ||||||||||||||||| ||||||||||| ||||    
T  31644429 aaaattattcaatgtcataaaaatttgtcttgtgttgttctaccttgt 31644382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 176
Target Start/End: Original strand, 40563842 - 40563881
Alignment:
Q  137 atcaaaaattattcaacatcataaaaatttgtcttatgtt 176  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  40563842 atcaaaaattattcaatatcataaaaatttgtcttgtgtt 40563881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 22432435 - 22432493
Alignment:
Q  157 ataaaaatttgtcttatgttgttctactttgtgttttgctgttatgtccaatacttact 215  Q
    ||||||||||||| | ||||||||||| ||||||| ||||||| |||| | ||||||||    
T  22432435 ataaaaatttgtcatgtgttgttctaccttgtgttgtgctgttctgtctagtacttact 22432493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 26180264 - 26180353
Alignment:
Q  15 gacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaa 104  Q
    |||| |||||||| ||| |||| || | |||||||| |||| || | ||||||||| |||||| ||||||||||||| ||  ||||||||    
T  26180264 gacatgataaattggagacaaaagatatgacaaaaatataatttttagttcttcactaaaccatatcacaactttttatcctacgtacaa 26180353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 9e-25; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 37618372 - 37618502
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||||| |||||||| ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  37618372 acaggacaaattggaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgttttaaa 37618471  T
Q  116 taccacaataatattttgtccatcaaaaatt 146  Q
    ||||| ||||  |||| ||||  ||||||||    
T  37618472 taccaaaatagcatttcgtcccccaaaaatt 37618502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 3251636 - 3251765
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||| |||||||| || ||| |||| | ||||||||||||||||||||||||| ||  ||||||||||||||| |||    
T  3251636 acaggacaaactggaggcaagcgacagaacaaaaacttatatttttgtccctcaccaaaccacatcacaactttttatcctacgtacaagttgtctaaaa 3251735  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||| ||||||||| ||||||||    
T  3251736 taccaaaataacattttgtccctcaaaaat 3251765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 4052605 - 4052476
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||||| |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  4052605 acaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 4052506  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  4052505 taccaaaatagcattttgtccctcaaaaat 4052476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 29563206 - 29563335
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  29563206 acaggacaaactcgaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 29563305  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| |||| |||||||||| ||||||||    
T  29563306 taccaaaatagtattttgtccctcaaaaat 29563335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 5968857 - 5968973
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| ||||||||||||||| ||||||||||| || ||||||||| |||||| |||||||| ||||| |    
T  5968857 gaggcaagggacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaataccaaaataaca 5968956  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  5968957 ttttgtccctcaaaaat 5968973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 30 - 145
Target Start/End: Original strand, 12753319 - 12753434
Alignment:
Q  30 aggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatat 129  Q
    |||||||||||| |||||||||  | ||| |||||| ||||||||||||| ||||||||||| || ||| |||||||||||| |||||||| ||||| ||    
T  12753319 aggcaaatgacaagacaaaaactcatatttttgttcctcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaataacat 12753418  T
Q  130 tttgtccatcaaaaat 145  Q
    |||||||  |||||||    
T  12753419 tttgtcccccaaaaat 12753434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 14005024 - 14005154
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  14005024 acaggacaaactggaggcaagggacaagacaaaaactcatatttttgtccatcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 14005123  T
Q  116 taccacaataatattttgtccatcaaaaatt 146  Q
    ||||| ||||| ||||||||||| |||||||    
T  14005124 taccaaaataacattttgtccataaaaaatt 14005154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 37664263 - 37664392
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||    
T  37664263 acaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 37664362  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||  ||||||||    
T  37664363 taccaaaatagcattttgtcgctcaaaaat 37664392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 41709902 - 41709773
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||||||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||  ||||||||||| ||| |||    
T  41709902 acaggacaaactggaggcaaatgacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtccaacgtacaagttatctaaaa 41709803  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  41709802 taccaaaatagcattttgtccctcaaaaat 41709773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 6386676 - 6386572
Alignment:
Q  41 aggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatca 140  Q
    |||||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||  ||||||||| |||    
T  6386676 aggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctca 6386577  T
Q  141 aaaat 145  Q
    |||||    
T  6386576 aaaat 6386572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 7394807 - 7394923
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||| |||||||||  | ||| |||| | ||||||||||| | ||||||||||| ||||||||||||||||||| |||||||| ||||| |    
T  7394807 gaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccataacacaactttttgtctcacgtacaagttgtctaaaataccaaaataaca 7394906  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  7394907 ttttgtccttcaaaaat 7394923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 8673048 - 8673164
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |    
T  8673048 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagca 8673147  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  8673148 ttttgtccctcaaaaat 8673164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 45446567 - 45446451
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||| ||||||  | ||| |||||| ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |    
T  45446567 gaggcaagggacaggataaaaactcatatttttgttcctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagca 45446468  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  45446467 ttttgtccctcaaaaat 45446451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 32303588 - 32303694
Alignment:
Q  39 acaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccat 138  Q
    |||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  ||||||||| |    
T  32303588 acaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccct 32303687  T
Q  139 caaaaat 145  Q
    |||||||    
T  32303688 caaaaat 32303694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 10656662 - 10656787
Alignment:
Q  12 agagacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtct 111  Q
    ||||||| || ||| | |||||||| ||||||||||||||  || || |||| |||||| |||||||| ||||||||||| |||||||||||| ||||||    
T  10656662 agagacatgacaaactagaggcaaaagacaggacaaaaactgaattttttgtccttcacaaaaccacaacacaactttttgtctcacgtacaaattgtct 10656761  T
Q  112 taaataccacaataatattttgtcca 137  Q
     ||||| || ||||| | ||||||||    
T  10656762 aaaatatcaaaataacaatttgtcca 10656787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 29672303 - 29672432
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||| ||| |||    
T  29672303 acaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttatctaaaa 29672402  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  29672403 taccaaaatagcattttgtccctcaaaaat 29672432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 34063253 - 34063124
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | || |||||||||| ||||||||||| || |||||||||||||||| |||    
T  34063253 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcgccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 34063154  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  34063153 taccaaaatagcattttgtccctcaaaaat 34063124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 17805816 - 17805696
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||||| ||||||||||| | ||||||| ||| ||||||||||||||||||| |||    
T  17805816 acaggacaaactagaggcaagggacaagacaaaaactcatatttttgttcctcaccaaaccaaagcacaactctttgtctcacgtacaagttgtctaaaa 17805717  T
Q  116 taccacaataatattttgtcc 136  Q
    ||||| ||||| |||||||||    
T  17805716 taccaaaataacattttgtcc 17805696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 30543015 - 30543131
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||  || |||||||||||||||| |||||||| ||||| |    
T  30543015 gaggcaatggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaacttttcgtcccacgtacaagttgtctaaaataccaaaataaca 30543114  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  30543115 ttttgtcccccaaaaat 30543131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 22756393 - 22756527
Alignment:
Q  18 aggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaata 117  Q
    |||| |||||||||||||  |||| |||||||||||||||| || | | |||  | |||||| ||||||||||| | ||||||||||||| ||| |||||    
T  22756393 aggacaaatttgaggcaagagacaagacaaaaacataaatttttatccctcattataccacaacacaactttttgtatcacgtacaagttatctaaaata 22756492  T
Q  118 ccacaataatattttgtccatcaaaaattattcaa 152  Q
    | | |||| | |||| |||| ||||||||||||||    
T  22756493 caaaaatagttttttatccaccaaaaattattcaa 22756527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 31732178 - 31732060
Alignment:
Q  27 ttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataa 126  Q
    |||||||||  |||| |||||||||  | ||| |||| | |||||||||||||  |||||||||| |||||| |||||||||||| |||||||| ||||     
T  31732178 ttgaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacatacaagttgtctaaaataccaaaatag 31732079  T
Q  127 tattttgtccatcaaaaat 145  Q
     ||||||||| ||||||||    
T  31732078 cattttgtccctcaaaaat 31732060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 32020032 - 32020110
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| |  |||||||||||||||| |||||||| |||| |||||||||| ||||||||    
T  32020032 tcaccaaaccacagcacaactttttgttccacgtacaagttgtctaaaataccaaaatagtattttgtccctcaaaaat 32020110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 31513576 - 31513692
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||  | ||||||||||||| |||||||| ||||  |    
T  31513576 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcctaggtacaagttgtctaaaataccaaaatagca 31513675  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  31513676 ttttgtccttcaaaaat 31513692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 6460336 - 6460257
Alignment:
Q  67 tcaccaaaccacatcacaactttttc-tctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||||||||||||||||||||||||  || |||||| ||||||||| |||||||| ||||| ||||||||||| ||||||    
T  6460336 tcaccaaaccacatcacaacttttttgtcccacgtataagttgtctaaaataccaaaataacattttgtccataaaaaat 6460257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 21272787 - 21272680
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||| | ||||  |||||||||     
T  21272787 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatactaaaatagcattttgtcct 21272688  T
Q  138 tcaaaaat 145  Q
    | ||||||    
T  21272687 ttaaaaat 21272680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 15001592 - 15001482
Alignment:
Q  15 gacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaa 114  Q
    ||||||| ||| | |||||||  ||||| ||||||||  ||||| |||| | ||||||||||||| ||||||||||| || |||||||||||| ||| ||    
T  15001592 gacaggacaaactggaggcaatagacagaacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttatctaaa 15001493  T
Q  115 ataccacaata 125  Q
    |||||| ||||    
T  15001492 ataccaaaata 15001482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 131
Target Start/End: Complemental strand, 30501257 - 30501155
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||| | ||| |||| | ||||||||||||| ||||||||||| || ||||||||||||| || |||||| | ||||| |    
T  30501257 gaggcaagggacaggacaaaaacacatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgcctaaaatacaaaaataaca 30501158  T
Q  129 ttt 131  Q
    |||    
T  30501157 ttt 30501155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 10467189 - 10467060
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||||| ||| ||||||||| ||||||||||| || |||||||||||||||| |||    
T  10467189 acaggacaaactggaggcaagagacaagacaaaaactgatatttttgttcctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 10467090  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  |||||||||  |||||||    
T  10467089 tatcaaaatagcattttgtcccccaaaaat 10467060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 27104084 - 27103955
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||| | ||||||||||||  ||||||||||| || |||||||||||||||| |||    
T  27104084 acaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccactgcacaactttttgtcccacgtacaagttgtctaaaa 27103985  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  ||||||||| ||||||||    
T  27103984 tatcaaaatagcattttgtccctcaaaaat 27103955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 37861984 - 37861789
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | ||||||| |||||||||||||||  | ||| || | | |||||||||||||||| |||| ||| ||  ||||||||||||||| |||    
T  37861984 acaggacaaactggaggcaagtgacaggacaaaaactcatatttttatccctcaccaaaccacatcataactatttgtcctacgtacaagttgtctaaaa 37861885  T
Q  116 taccacaataatattttgtccatcaaaaattattcaacatcat-aaaaatttgtcttatgttgttctactttgtgttttgctgttatgtccaatacttac 214  Q
    ||||| ||||  |||||||     |||||||| ||||   ||| ||||||||||| | || |||||| | ||||||| | ||||| |||||| |||||||    
T  37861884 taccaaaatagcattttgt-----aaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctgtccagtacttac 37861790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 41548730 - 41548614
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||| || |||||| ||||||||||| || |||||||||||||||| ||||| || ||||| |    
T  41548730 gaggcaagagacaggacaaaaactgatatttttgtacctcagcagaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaataaca 41548631  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  41548630 ttttgtcccccaaaaat 41548614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 35225788 - 35225685
Alignment:
Q  15 gacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaa 114  Q
    ||||||| ||| | |||||||  ||||||||||||||   |||| |||| | || |||||||||||||||||||||| || || ||||||||||||| ||    
T  35225788 gacaggacaaactggaggcaagggacaggacaaaaactgcaatttttgtccctcgccaaaccacatcacaactttttgtcacaagtacaagttgtctaaa 35225689  T
Q  115 atac 118  Q
    ||||    
T  35225688 atac 35225685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 34101582 - 34101504
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| || |||||||| |  |||||||||||||||| |||||||| ||||  ||||||||| ||||||||    
T  34101582 tcaccaaaccacaacataacttttttttccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 34101504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 7591427 - 7591556
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||| ||||||||| ||||||||||| || |||||| ||||||||| |||    
T  7591427 acaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacaacacaactttttgtcacacgtataagttgtctaaaa 7591526  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  |||||||||  |||||||    
T  7591527 tatcaaaatagcattttgtcccccaaaaat 7591556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 10320287 - 10320376
Alignment:
Q  46 aaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtc 135  Q
    ||||||| ||||| || | | ||||||||||||| |||||||||||  | |||||||||||||||| ||||| || ||||| ||||||||    
T  10320287 aaaaacagaaattcttatccctcaccaaaccacaacacaactttttaccacacgtacaagttgtctaaaatatcaaaataacattttgtc 10320376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 29611048 - 29611144
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||  ||||||||||||||  ||||| |||| | || |||||||||| ||||||||||| || |||||| ||||||||| ||| |||| ||||    
T  29611048 gaggcaagggacaggacaaaaactgaaatttttgtccctcgccaaaccacaacacaactttttgtcccacgtaaaagttgtctaaaacaccaaaata 29611144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 54273 - 54175
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    |||| |||||||||||||||| |||| |||  | |||||||||||||||||||| || ||| |||||||| ||  ||||| || ||||||||||| ||||    
T  54273 gacatgacaaaaacataaatttttgtcctttgctaaaccacatcacaactttttgtcccacatacaagttatcgaaaata-caaaataatattttatcca 54175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 13406966 - 13407033
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgt 134  Q
    ||||||||||||| || || ||||| ||||||||||||||||||| |||||||| ||||  |||||||    
T  13406966 tcaccaaaccacagcataattttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgt 13407033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 25478346 - 25478239
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||| ||||||  | ||| |||| | ||| |||| |||| ||||||||||| ||  ||||||||||||||| |||||||| |||| ||||||||||     
T  25478346 gacaggaaaaaaactcatatttttgtccctcatcaaatcacagcacaactttttgtcctacgtacaagttgtctaaaataccaaaatagtattttgtccc 25478247  T
Q  138 tcaaaaat 145  Q
    | ||||||    
T  25478246 taaaaaat 25478239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 36426283 - 36426348
Alignment:
Q  72 aaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    |||||||| |||| |||||| |||||| |||||||||||| |||||||| |||| | |||||||||    
T  36426283 aaaccacaacacatctttttgtctcacatacaagttgtctaaaataccaaaatagtcttttgtcca 36426348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 40389165 - 40389056
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||| ||||||||||||||  | ||| || |   ||||||||||||| ||||||||||| || ||| |||||||||| |||||    
T  40389165 acaggacaaactggaggcaaaggacaggacaaaaactgatatttttatctctcaccaaaccacagcacaactttttgtcccacatacaagttgttttaaa 40389066  T
Q  116 taccacaata 125  Q
    | ||| ||||    
T  40389065 tgccaaaata 40389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 3800945 - 3801025
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatac 118  Q
    |||| ||||||||||||| || |||||| |||  |||||||||||||||||||| | |||| ||| |||| ||| ||||||    
T  3800945 gacaagacaaaaacataagtttttgttcctcattaaaccacatcacaactttttgtttcacatactagttatctaaaatac 3801025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 3361789 - 3361844
Alignment:
Q  82 acaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    |||||||||||||||| ||||||||||||| |  ||||| ||||| ||||||||||    
T  3361789 acaactttttctctcaagtacaagttgtctaatctaccaaaataacattttgtcca 3361844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 10932810 - 10932739
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccat 138  Q
    |||| |||||||||||||||||||  |  ||||||||| |||||| |||||||| |||| | ||||||||||    
T  10932810 tcactaaaccacatcacaacttttagttccacgtacaatttgtctaaaataccaaaatagtcttttgtccat 10932739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 17520715 - 17520626
Alignment:
Q  20 gataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtc 110  Q
    |||||| | |||||||  |||||| ||||||| || ||| |||| | ||||||||||||| ||||||||||| || ||| |||||||||||    
T  17520715 gataaaatggaggcaagggacagggcaaaaacttatatt-ttgtccctcaccaaaccacaacacaactttttgtcccacatacaagttgtc 17520626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 39642957 - 39642899
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||||| ||||||||| | || |||||||| ||||||| |||||||| ||||    
T  39642957 tcaccaaaccacaacacaactttctgtcccacgtacaggttgtctaaaataccaaaata 39642899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 5892171 - 5892074
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtc 135  Q
    |||| |||||||||  |||||||||| |||||  |||||  | ||||||||||| || |||||| ||||||||| || ||||| | |||| |||||||    
T  5892171 gacaagacaaaaactgaaattattgtccttcattaaaccgtaacacaactttttgtcacacgtataagttgtctaaattaccaaattaattttttgtc 5892074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 145
Target Start/End: Original strand, 27109565 - 27109650
Alignment:
Q  60 ttgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||||| | ||||||||||| ||||||||||| || | ||||||| |||| | |||||||| ||||| |||| ||||  |||||||    
T  27109565 ttgttccttaccaaaccacaacacaactttttgtcccgcgtacaaattgtttaaaataccaaaataacatttcgtcccccaaaaat 27109650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 16595151 - 16595231
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatac 118  Q
    |||||||||||||||| || | |||| | || | || ||||| ||||||||||| || |||||||||||| ||| ||||||    
T  16595151 gacaggacaaaaacatgaagttttgtccctcgctaatccacaacacaactttttgtcccacgtacaagttatctaaaatac 16595231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 41 - 125
Target Start/End: Complemental strand, 45114155 - 45114071
Alignment:
Q  41 aggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||||||  | ||| |||| | |||||||||||||  |||||||||| ||  | ||||||||||||| |||||||| ||||    
T  45114155 aggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcataggtacaagttgtctaaaataccaaaata 45114071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 4e-24; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 2615021 - 2614892
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||||| |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  2615021 acaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 2614922  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  2614921 taccaaaatagcattttgtccctcaaaaat 2614892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 10324115 - 10324235
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||    
T  10324115 acaggacaaactagaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaa 10324214  T
Q  116 taccacaataatattttgtcc 136  Q
    ||||| ||||| |||||||||    
T  10324215 taccaaaataacattttgtcc 10324235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 24203487 - 24203360
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  24203487 acaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 24203388  T
Q  116 taccacaataatattttgtccatcaaaa 143  Q
    ||||| ||||| ||||||||| ||||||    
T  24203387 taccaaaataacattttgtccctcaaaa 24203360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 3932862 - 3932940
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||||||||||||||| || |||||||||||||||| |||||||| ||||| ||||||||| ||||||||    
T  3932862 tcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccctcaaaaat 3932940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 3259808 - 3259679
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  3259808 acaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtctaaaa 3259709  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  3259708 taccaaaatagcattttgtccctcaaaaat 3259679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 11279231 - 11279124
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||  ||||| |||     
T  11279231 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttatccc 11279132  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  11279131 tcaaaaat 11279124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 15277284 - 15277403
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||    
T  15277284 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttatcccacgtacaagttgtctaaaa 15277383  T
Q  116 taccacaataatattttgtc 135  Q
    ||||| ||||  ||||||||    
T  15277384 taccaaaatagcattttgtc 15277403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 32409878 - 32409985
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||  ||||||||||| |||||||| |||| ||||||||||     
T  32409878 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccactcacaagttgtctaaaataccaaaatagtattttgtccc 32409977  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  32409978 tcaaaaat 32409985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 11382138 - 11382060
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||  ||||||||| ||||||||    
T  11382138 tcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 11382060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 24242738 - 24242660
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||||||||||||||| || |||||||||||||||| |||||||| ||||  ||||||||| ||||||||    
T  24242738 tcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 24242660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 15276941 - 15277070
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||    
T  15276941 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttttcccacgtacaagttgtctaaaa 15277040  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
     | || ||||  ||||||||| ||||||||    
T  15277041 gaacaaaatagcattttgtccctcaaaaat 15277070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 11613818 - 11613924
Alignment:
Q  39 acaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccat 138  Q
    |||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||| | |||||||| ||||  ||||||||| |    
T  11613818 acaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtataaaataccaaaatagcattttgtccct 11613917  T
Q  139 caaaaat 145  Q
    |||||||    
T  11613918 caaaaat 11613924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 7396152 - 7396258
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||| ||||  |||| | |||| |||||||  ||||||||||| ||||||||||||||| ||| |||||| | |||| | |||||||||    
T  7396152 gacaggacaaaaacagaaatc-ttgtccctcactaaaccactacacaactttttgtctcacgtacaagttatctaaaatacaaaaatagtgttttgtcca 7396250  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  7396251 tcaaaaat 7396258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 11212331 - 11212253
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| || ||| |||| |||||||| |||||||||| |||||||| ||||| ||||||||| ||||||||    
T  11212331 tcaccaaaccacaacataaccttttgtctcacgtgcaagttgtctaaaataccaaaataacattttgtccctcaaaaat 11212253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 4494118 - 4494239
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataa-attattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaa 114  Q
    |||||| ||| | ||||||| ||||||||||||||  | | ||| |||| | |||||||||||||  |||||||||| || |||||||||||||||| ||    
T  4494118 acaggacaaactggaggcaagtgacaggacaaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaa 4494217  T
Q  115 ataccacaataatattttgtcc 136  Q
    |||||  ||||| |||||||||    
T  4494218 ataccgaaataacattttgtcc 4494239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 10485282 - 10485153
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||| ||||||||| ||||||||||| || |||||||||||||||| |||    
T  10485282 acaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 10485183  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  |||||||||  |||||||    
T  10485182 tatcaaaatagcattttgtcccccaaaaat 10485153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 32132384 - 32132513
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||| ||||| ||||||||||| || |||||||||||||||| |||    
T  32132384 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaatccacaacacaactttttgtcccacgtacaagttgtctaaaa 32132483  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  |||||||||  |||||||    
T  32132484 tatcaaaatagcattttgtcccccaaaaat 32132513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 34176942 - 34176826
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    ||||||| ||||| |||||||||  | ||| ||||   |||||||| |||| ||||||||||| || ||||||||||| |||| |||||||| ||||  |    
T  34176942 gaggcaagtgacatgacaaaaactcatatttttgtctctcaccaaatcacagcacaactttttgtcccacgtacaagtagtctaaaataccaaaatagca 34176843  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  34176842 ttttgtccctcaaaaat 34176826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 9902684 - 9902791
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | |||  |||||||| ||||||||||| || |||||||||||||||| |||||||| ||||| |||| ||||     
T  9902684 gacaggacaaaaactgatatttttgtccctcattaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacatttcgtccc 9902783  T
Q  138 tcaaaaat 145  Q
     |||||||    
T  9902784 ccaaaaat 9902791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 10960103 - 10959996
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||| ||||||||| ||||||||||| || |||||||||||||||| |||||| | ||||  |||||||||     
T  10960103 gacaggacaaaaactcatatttttgtccctcaacaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatacaaaaatagcattttgtccc 10960004  T
Q  138 tcaaaaat 145  Q
     |||||||    
T  10960003 ccaaaaat 10959996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 166978 - 167036
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||    
T  166978 tcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaata 167036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 3379784 - 3379726
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||| | ||||||||||| |||||| ||||||||||||||||||||| ||||    
T  3379784 tcaccaaaccatagcacaactttttgtctcacatacaagttgtcttaaataccaaaata 3379726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 17867905 - 17867831
Alignment:
Q  71 caaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||| ||||||||||| || ||||||||| |||||| |||||||| ||||  ||||||||| ||||||||    
T  17867905 caaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaat 17867831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 17877688 - 17877614
Alignment:
Q  71 caaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||| ||||||||||| || ||||||||| |||||| |||||||| ||||  ||||||||| ||||||||    
T  17877688 caaaccacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaatagcattttgtccctcaaaaat 17877614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 29054481 - 29054379
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||||| || ||||  |||| |||||||||   |||| |||| | || |||||||||| ||||||||||| ||||||||||||||||||| |||    
T  29054481 acaggacaaattggaagcaagggacatgacaaaaactacaatttttgtccctcgccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaa 29054382  T
Q  116 tac 118  Q
    |||    
T  29054381 tac 29054379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 3290782 - 3290668
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | | ||||||||||| ||||||||||  || |||||| ||||||||| |||||||| ||||  |    
T  3290782 gaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacaacacaactttt--tcccacgtataagttgtctaaaataccaaaatagca 3290685  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  3290684 ttttgtccctcaaaaat 3290668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 8177938 - 8178014
Alignment:
Q  69 accaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||| ||||||||||| || ||||| |||||||||| |||||||| ||||| |||| ||||  |||||||    
T  8177938 accaaaccacaacacaactttttgtcccacgttcaagttgtctaaaataccaaaataacatttcgtcccccaaaaat 8178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 14925482 - 14925569
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||||||  | ||| |||| | |||||||||||||  |||||||||| || ||| |||||||||||| |||||||| ||||    
T  14925482 gacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttgtctaaaataccaaaata 14925569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 17443365 - 17443278
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||||||  | ||| || | | |||||||||||||  |||||||||| || |||||||||||||||| |||||||| ||||    
T  17443365 gacaggacaaaaactcatatttttatccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccaaaata 17443278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 18057622 - 18057535
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||| |||||||||  | ||| |||| | |||||||||||||  |||||||||| || |||||||||||||||| |||||||| ||||    
T  18057622 gacatgacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccaaaata 18057535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 34684038 - 34684117
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtct-taaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||| ||||||||||| |  ||||||||||||||||  |||||||| ||||  |||||||||  |||||||    
T  34684038 tcaccaaaccacaacacaactttttgttccacgtacaagttgtctaaaaataccaaaatagcattttgtcctccaaaaat 34684117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 18597175 - 18597257
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtct 111  Q
    |||||||  |||| ||||||| |  ||||| |||| | ||||||||||||| ||||||||||| || |||||| |||||||||    
T  18597175 gaggcaagggacatgacaaaatctgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtataagttgtct 18597257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 29202981 - 29203035
Alignment:
Q  66 ttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatacca 120  Q
    ||||| || ||||| ||||||||||||||||| ||||||||||| | ||||||||    
T  29202981 ttcactaatccacaacacaactttttctctcaagtacaagttgtttaaaatacca 29203035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 11675378 - 11675467
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaag 105  Q
    |||||| ||| | |||||||| ||||||||||||||  | ||| ||||   ||||||||||| | ||||||||||| || ||||||||||    
T  11675378 acaggacaaactggaggcaaaggacaggacaaaaactgatatttttgtctctcaccaaaccataacacaactttttatcccacgtacaag 11675467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 32860122 - 32860061
Alignment:
Q  70 ccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattt 131  Q
    |||||||||| |||||| |||| ||||||||||||||| ||| |||||| | ||||| ||||    
T  32860122 ccaaaccacagcacaaccttttgtctcacgtacaagttttctaaaatacaaaaataacattt 32860061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 4e-24; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 9512302 - 9512427
Alignment:
Q  20 gataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatacc 119  Q
    |||||| | ||||||| | |||||||||||||  | ||| |||| ||||||||||||||| ||||||||||| || |||||||||||||||| |||||||    
T  9512302 gataaactggaggcaagtaacaggacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaatacc 9512401  T
Q  120 acaataatattttgtccatcaaaaat 145  Q
    | ||||  ||||||||| ||||||||    
T  9512402 aaaatagcattttgtccctcaaaaat 9512427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 20802489 - 20802618
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||    
T  20802489 acaggacaaactggaggcaagagacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 20802588  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  20802589 taccaaaatagcattttgtccctcaaaaat 20802618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 21580154 - 21580025
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||||| |||||||  ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| |||||||||||| |||||| |||    
T  21580154 acaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaaattgtctaaaa 21580055  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  || |||||| ||||||||    
T  21580054 taccaaaatagcatgttgtccctcaaaaat 21580025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 2725091 - 2725219
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||    
T  2725091 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtc-cacgtacaagttgtctaaaa 2725189  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  2725190 taccaaaatagcattttgtccctcaaaaat 2725219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 55594009 - 55593884
Alignment:
Q  20 gataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatacc 119  Q
    |||||| | |||||||  ||||||||||||||  | ||| | || | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||    
T  55594009 gataaactggaggcaagggacaggacaaaaactcatattttagtccctcaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaatacc 55593910  T
Q  120 acaataatattttgtccatcaaaaat 145  Q
    | ||||| ||||||||| ||||||||    
T  55593909 aaaataacattttgtccctcaaaaat 55593884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 168
Target Start/End: Original strand, 50729513 - 50729653
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||| |||||||||  ||||| ||||   ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||  |    
T  50729513 gaggcaagggacatgacaaaaactgaaatttttgtctatcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaataccaaaatagca 50729612  T
Q  129 ttttgtccatcaa-aaattattcaacatcataaaaatttgt 168  Q
    ||| ||||  ||| |||||||| || |||||||||||||||    
T  50729613 tttcgtcccgcaataaattatttaatatcataaaaatttgt 50729653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 43641205 - 43641098
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |||||||||     
T  43641205 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 43641106  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  43641105 tcaaaaat 43641098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 50727893 - 50728000
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||| ||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||| |||||||||     
T  50727893 gacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccc 50727992  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  50727993 tcaaaaat 50728000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 50735907 - 50736014
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||| ||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||| |||||||||     
T  50735907 gacaggacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccc 50736006  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  50736007 tcaaaaat 50736014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 24210447 - 24210317
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | |||||||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  24210447 acaggacaaactggaggcaagggacaggacaaaaactcatattattgtccctcaccaaaccacagcacaactttttatcccacgtacaagttgtctaaaa 24210348  T
Q  116 taccacaataata-ttttgtccatcaaaaat 145  Q
    ||||| ||||  | |||||||| ||||||||    
T  24210347 taccaaaatagcatttttgtccctcaaaaat 24210317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 1231439 - 1231310
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||||||| | |||||||  ||| ||||||||||  | ||| |||| | |||| |||||||| ||||||||||| || |||||||||||||||| |||    
T  1231439 acaggataaactggaggcaagagactggacaaaaactcatatttttgtccctcacaaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 1231340  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||| ||||||||| ||||||||    
T  1231339 tatcaaaataacattttgtccctcaaaaat 1231310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 33176990 - 33177119
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||| ||||||||||| |||    
T  33176990 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgcacaagttgtctaaaa 33177089  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||| |||||||||  |||||||    
T  33177090 taccaaaataacattttgtcccccaaaaat 33177119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 33552800 - 33552929
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||||| || ||||  |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  33552800 acaggacaaattggatgcaagggacaagacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 33552899  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  33552900 taccaaaatagcattttgtccctcaaaaat 33552929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 38486215 - 38486344
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||||||| | |||||||  |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||| ||||||||||||||| |||    
T  38486215 acaggataaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctaacgtacaagttgtctaaaa 38486314  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  ||||||||| ||||||||    
T  38486315 tatcaaaatagcattttgtccctcaaaaat 38486344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 56154749 - 56154620
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||| ||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  56154749 acaggaaaaactggaggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 56154650  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  56154649 taccaaaatagcattttgtccctcaaaaat 56154620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 23521983 - 23521879
Alignment:
Q  41 aggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatca 140  Q
    |||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  ||||||||| |||    
T  23521983 aggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctca 23521884  T
Q  141 aaaat 145  Q
    |||||    
T  23521883 aaaat 23521879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 49152080 - 49152186
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || ||||||||||||||| |||| |||| ||||| ||||||||||    
T  49152080 gacacgacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttatcccacgtacaagttgtc-taaaaaccaaaataacattttgtcca 49152178  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  49152179 tcaaaaat 49152186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 55065313 - 55065420
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| ||||| || ||||  |||||||||     
T  55065313 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcct 55065412  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  55065413 tcaaaaat 55065420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 2629909 - 2630019
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||| |||| |||||||||  | ||| |||| | |||||| |||| ||||||||||||| ||||||||||||||||||| |||    
T  2629909 acaggacaaactagaggcaaaggacatgacaaaaactcatatttttgtccctcaccagaccaaatcacaactttttgtctcacgtacaagttgtctaaaa 2630008  T
Q  116 taccacaataa 126  Q
    ||||| |||||    
T  2630009 taccaaaataa 2630019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 136
Target Start/End: Complemental strand, 3649742 - 3649644
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcc 136  Q
    ||||||||||||||  ||||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| ||| |||| ||||| |||| ||||    
T  3649742 gacaggacaaaaactaaaatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaacaccaaaataacatttcgtcc 3649644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 148
Target Start/End: Complemental strand, 20694485 - 20694367
Alignment:
Q  30 aggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatat 129  Q
    ||||||| ||||||||||||||  | ||| |||| | ||||||||||||| | ||||||||| ||  ||||||||||||||| |||||||| ||||  ||    
T  20694485 aggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacgcaactttttgtccaacgtacaagttgtctaaaataccaaaatagcat 20694386  T
Q  130 tttgtccatcaaaaattat 148  Q
    |||||||  ||||||||||    
T  20694385 tttgtcccccaaaaattat 20694367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 24002467 - 24002337
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  24002467 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 24002368  T
Q  116 taccacaataata-ttttgtccatcaaaaat 145  Q
    ||||| ||||  | |||||||| ||||||||    
T  24002367 taccaaaatagcatttttgtccctcaaaaat 24002337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 38812648 - 38812530
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  38812648 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 38812549  T
Q  116 taccacaataatattttgt 134  Q
    ||||| ||||  |||||||    
T  38812548 taccaaaatagcattttgt 38812530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 44324300 - 44324409
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||| ||| ||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||| |||||    
T  44324300 acaggacaaactagaggcaaaagacgggacaaaaactgatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgttttaaa 44324399  T
Q  116 taccacaata 125  Q
    ||||| ||||    
T  44324400 taccaaaata 44324409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 46680468 - 46680597
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | | ||||||||||| ||||||||||| |||||||||||| |||||| |||    
T  46680468 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaccacagcacaactttttgtctcacgtacaaattgtctaaaa 46680567  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| | ||||||    
T  46680568 taccataatagcattttgtccctaaaaaat 46680597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 52319451 - 52319322
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||||||| |||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  52319451 acaggacaaactggaggcaagggacaggacgaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 52319352  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    |  || ||||| ||||||||| ||||||||    
T  52319351 tgtcaaaataacattttgtccctcaaaaat 52319322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 54543117 - 54542989
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||||| |||||||  ||||||||||||||  | ||| |||| | ||||||||||| | ||||||||||  || |||||||||||||||| |||    
T  54543117 acaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccatagcacaacttttg-tcccacgtacaagttgtctaaaa 54543019  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  54543018 taccaaaatatcattttgtccctcaaaaat 54542989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 36886047 - 36885931
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || ||||||||| |||||| |||||||  ||||  |    
T  36886047 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttatcccacgtacaaattgtctaaaatacctaaatagca 36885948  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  36885947 ttttgtccctcaaaaat 36885931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 12600992 - 12600885
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    |||| |||||||||  | ||| |||| | ||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||  |||||||||     
T  12600992 gacaagacaaaaactcatatttttgtccctcatcaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagcattttgtccc 12600893  T
Q  138 tcaaaaat 145  Q
    | ||||||    
T  12600892 taaaaaat 12600885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 29785517 - 29785624
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||| ||||||||  | ||| |||| | ||||||||||||| |||| |||||| || |||||||||||||||| |||||||| ||||  |||||||||     
T  29785517 gacagaacaaaaactcatatttttgtccctcaccaaaccacaacacagctttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 29785616  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  29785617 tcaaaaat 29785624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 36743697 - 36743776
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaatt 146  Q
    ||||||||| ||| ||||||||||| || |||||||||||||||| |||||||| ||||  ||||||||| |||||||||    
T  36743697 tcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaatt 36743776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 38 - 169
Target Start/End: Complemental strand, 52673917 - 52673786
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    |||| |||||||||| ||||| |||| | |||| ||||| || ||||| ||||| |||||||||  |||| ||| |||||| | |||||  |||||||||    
T  52673917 gacatgacaaaaacagaaatttttgtccctcactaaacctcaacacaattttttgtctcacgtatgagttatctaaaatacaaaaataaatttttgtcca 52673818  T
Q  138 tcaaaaattattcaacatcataaaaatttgtc 169  Q
     |||||||||||||| | ||||||| ||||||    
T  52673817 ccaaaaattattcaataccataaaagtttgtc 52673786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 53200596 - 53200731
Alignment:
Q  11 cagagacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaac-tttttctctcacgtacaagttgt 109  Q
    ||||||||||||||| | |||||||   ||| |||||||||  ||||| |||| | ||||||||||||| |||||| ||||| || ||||||||||||||    
T  53200596 cagagacaggataaactggaggcaaggaacatgacaaaaactgaaatttttgtccctcaccaaaccacagcacaacttttttgtcccacgtacaagttgt 53200695  T
Q  110 cttaaataccacaataatattttgtccatcaaaaat 145  Q
    || ||| | || |||| ||||| |||| ||||||||    
T  53200696 ctaaaacatcaaaatagtatttcgtccctcaaaaat 53200731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 52949848 - 52949719
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||| ||||||||| ||||||||||| || |||||||||||||||| |||    
T  52949848 acaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 52949749  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  |||||||||  |||||||    
T  52949748 tatcaaaatagcattttgtcccccaaaaat 52949719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 21202867 - 21202747
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | | | |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  21202867 acaggacaaactggaggcaagagacaggacaaaaactcataattttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 21202768  T
Q  116 taccacaataatattttgtcc 136  Q
    || || ||||  |||||||||    
T  21202767 tatcaaaatagcattttgtcc 21202747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 39 - 111
Target Start/End: Original strand, 25978592 - 25978664
Alignment:
Q  39 acaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtct 111  Q
    |||||||||||||  ||||| |||| | ||||||||||| ||||||||||||| |||||| ||||||||||||    
T  25978592 acaggacaaaaactgaaatttttgtccctcaccaaaccatatcacaactttttgtctcacttacaagttgtct 25978664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 32181369 - 32181282
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||||||  | ||| |||| | |||||||||||||  |||||||||| || |||||||||||||||| |||||||| ||||    
T  32181369 gacaggacaaaaactcatatttttgtccctcaccaaaccacagtacaactttttgtcccacgtacaagttgtctaaaataccaaaata 32181282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 36497323 - 36497216
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| ||  || |||||||||||| ||||| || ||||  ||| |||||     
T  36497323 gacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtccaacatacaagttgtctaaaatatcaaaatagcattctgtccc 36497224  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  36497223 tcaaaaat 36497216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 34930048 - 34929914
Alignment:
Q  11 cagagacaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtc 110  Q
    |||| |||| ||||| | |||||||  ||||||||||||||  | ||| |||||| ||||||||||||| |||||||||||  | ||  |||||||||||    
T  34930048 cagatacagaataaactggaggcaagggacaggacaaaaactcatatttttgttcctcaccaaaccacagcacaactttttgccccatatacaagttgtc 34929949  T
Q  111 ttaaataccacaataatattttgtccatcaaaaat 145  Q
    | ||||| || ||||  |||||||||  |||||||    
T  34929948 taaaatatcaaaatagcattttgtcccccaaaaat 34929914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 20517993 - 20518110
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||||||||||||   | ||| |||| | |||||||| |||| || ||||| || || |||||||||||||||| |||||||| ||||  |    
T  20517993 gaggcaagagacaggacaaaaagtcatatttttgtccctcaccaaatcacagcataacttcttgtcccacgtacaagttgtctaaaataccaaaatagca 20518092  T
Q  129 ttttgtccatcaaaaatt 146  Q
    |||||||| |||||||||    
T  20518093 ttttgtccctcaaaaatt 20518110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 22318380 - 22318461
Alignment:
Q  54 aaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtc 135  Q
    ||||| |||| | ||||||||||||| ||||||||||| ||| ||||| ||||||||| ||| |||| ||||| ||||||||    
T  22318380 aaatttttgtccctcaccaaaccacaacacaactttttgtcttacgtagaagttgtctaaaacaccaaaataacattttgtc 22318461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 44649122 - 44649251
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||| ||||||||| ||||||||||| || || ||||||||||||| |||    
T  44649122 acaggacaaactggaggcaagagacaggacaaaaactgatatttttgtccctcagcaaaccacaacacaactttttgtcccatgtacaagttgtctaaaa 44649221  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  |||||||||  |||||||    
T  44649222 tatcaaaatagcattttgtcccccaaaaat 44649251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 6776699 - 6776611
Alignment:
Q  23 aaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtct 111  Q
    ||||| |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||| |||||||||    
T  6776699 aaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtct 6776611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 37865868 - 37865752
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||| |||||||||  | ||| |||| | |||||||| |||| ||||||||||| || || ||||||||||||| |||||||| ||||  |    
T  37865868 gaggcaagagacatgacaaaaactcatatttttgtccctcaccaaatcacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaatagca 37865769  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||| ||||    
T  37865768 ttttgtccctcagaaat 37865752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 43739567 - 43739459
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    |||| |||||||||  |||||||||| | ||||||||||||| |||||| |||| || ||| |||||||||||| |||||  | ||||| ||||| ||||    
T  43739567 gacatgacaaaaactgaaattattgtccctcaccaaaccacaacacaacattttgtcccacatacaagttgtctaaaatattaaaataacattttatcca 43739468  T
Q  138 tcaaaaatt 146  Q
      |||||||    
T  43739467 caaaaaatt 43739459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 54 - 146
Target Start/End: Original strand, 45577688 - 45577780
Alignment:
Q  54 aaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaatt 146  Q
    ||||| |||||| || | |||||||| ||||||||||| || ||||| |||||||||| |||||||| ||| | ||||||||||  |||||||    
T  45577688 aaattcttgttcctcgctaaaccacaacacaactttttgtcccacgtgcaagttgtctaaaataccaaaatgacattttgtccacaaaaaatt 45577780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 29616240 - 29616169
Alignment:
Q  74 accacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||||| ||||||||||| || ||||||||| |||||| |||||||| ||||| ||||||||| | ||||||    
T  29616240 accacagcacaactttttgtcccacgtacaaattgtctaaaataccaaaataacattttgtcccttaaaaat 29616169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 41711953 - 41711866
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||| ||  | ||| |||| | |||||||||||||  |||||||||| ||||||||||| ||||||| |||||||| ||||    
T  41711953 gacaggacaaagactcatatttttgtccctcaccaaaccacagtacaactttttgtctcacgtacaggttgtctaaaataccaaaata 41711866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 4325868 - 4325790
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||| ||||| || ||||||||||| || |||||||||||||||| |||||||| ||||  |||||||||  |||||||    
T  4325868 tcacaaaaccgcaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaat 4325790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 23328024 - 23327930
Alignment:
Q  39 acaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttc-tctcacgtacaagttgtcttaaataccacaataatatttt 132  Q
    |||||||||||||  | ||| |||| | ||| ||||||||| |||||||||||  || |||||||||||||||| |||||||| ||||| |||||    
T  23328024 acaggacaaaaactcatatttttgtccctcagcaaaccacaacacaacttttttgtcccacgtacaagttgtctaaaataccaaaataacatttt 23327930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Complemental strand, 28115329 - 28115271
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||||| ||||||||||| || ||| |||||||||||| |||||||| ||||    
T  28115329 tcaccaaaccacaacacaactttttgtcccacatacaagttgtctaaaataccaaaata 28115271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 145
Target Start/End: Original strand, 47642504 - 47642578
Alignment:
Q  71 caaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||| ||||||||||| || |||||||||||||||| ||||| || ||||  |||||||||  |||||||    
T  47642504 caaaccacaacacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtcccccaaaaat 47642578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 50178450 - 50178580
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaac-tttttctctcacgtacaagttgtcttaa 114  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||| ||||||||| |||||| ||||| || |||||||||||||||| ||    
T  50178450 acaggacaaactggaggcaagagacaggacaaaaactgatatttttgtgcctcagcaaaccacagcacaacttttttgtcccacgtacaagttgtctaaa 50178549  T
Q  115 ataccacaataatattttgtccatcaaaaat 145  Q
    ||| || ||||  |||||||||  |||||||    
T  50178550 atatcaaaatagcattttgtcccccaaaaat 50178580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 20 - 145
Target Start/End: Original strand, 37695503 - 37695628
Alignment:
Q  20 gataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatacc 119  Q
    |||||||| |||| ||  |||| |||||||||  | ||| |||| | ||| ||||||||| ||||||||||| || |||||||| ||||||| ||||| |    
T  37695503 gataaattggaggtaagagacaagacaaaaactgatatttttgtccctcatcaaaccacaacacaactttttgtcccacgtacaggttgtctaaaatatc 37695602  T
Q  120 acaataatattttgtccatcaaaaat 145  Q
    | ||||| |||| ||||  |||||||    
T  37695603 aaaataacatttcgtcccccaaaaat 37695628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 7001967 - 7001853
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||| ||||||||| ||||| |||| | ||||||||||||| ||||||||||| |   | ||| |||||||| ||||||||| ||||| |    
T  7001967 gaggcaagagacagaacaaaaacaaaaatttttgtccctcaccaaaccacaacacaactttttgttctatgtataagttgtc-taaataccaaaataaca 7001869  T
Q  129 ttttgtccatcaaaaat 145  Q
     |||||||| |||||||    
T  7001868 -tttgtccaccaaaaat 7001853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 9948046 - 9947966
Alignment:
Q  27 ttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagtt 107  Q
    |||||||||  |||| |||||||||  ||||| || | | |||| ||||||||| |||||||||| |||||||||||||||    
T  9948046 ttgaggcaagagacatgacaaaaactaaaattcttatccctcactaaaccacattacaactttttgtctcacgtacaagtt 9947966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 39078764 - 39078660
Alignment:
Q  41 aggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatca 140  Q
    ||||||||| |  ||||| |||| | ||||||||||||| ||||| ||||| ||  |||||| |||||||| ||| |||| ||||| |||||||||  ||    
T  39078764 aggacaaaacctgaaatttttgtccctcaccaaaccacaacacaaatttttgtcctacgtacgagttgtctaaaacaccaaaataacattttgtccccca 39078665  T
Q  141 aaaat 145  Q
    |||||    
T  39078664 aaaat 39078660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 2787070 - 2786963
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| |||||| |||||||||||||| ||||| || ||||||||| || ||| |||  ||| ||||| |||| ||||     
T  2787070 gacaggacaaaaactcatatttttgtccttcactaaaccacatcacaaatttttgtcccacgtacaaattatctaaaaatccaaaataacatttcgtccc 2786971  T
Q  138 tcaaaaat 145  Q
     |||||||    
T  2786970 ccaaaaat 2786963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 7554959 - 7555010
Alignment:
Q  60 ttgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtct 111  Q
    |||| |||||| |||||| | ||||||||||| |||||||||||||||||||    
T  7554959 ttgtccttcactaaaccataacacaactttttgtctcacgtacaagttgtct 7555010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 9807261 - 9807175
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||||||  || || |||| || ||||||||||||  |||||||||| ||  ||||||||||||||| |||||||| ||||    
T  9807261 gacaggacaaaaactcaactttttgtcct-caccaaaccacagtacaactttttgtcctacgtacaagttgtctaaaataccaaaata 9807175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 50186605 - 50186554
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatac 118  Q
    ||||||||||||| ||||||||||| || ||| |||||||||||| ||||||    
T  50186605 tcaccaaaccacaacacaactttttatcccacatacaagttgtctaaaatac 50186554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 29 - 111
Target Start/End: Complemental strand, 26083454 - 26083372
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtct 111  Q
    |||||||  |||| |||||||||  ||||| |||| | ||||||||||||| || |||||||| || ||| ||||||||||||    
T  26083454 gaggcaagggacatgacaaaaactgaaatttttgtccctcaccaaaccacagcataactttttgtcccacttacaagttgtct 26083372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 40792486 - 40792416
Alignment:
Q  75 ccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||||||||| | ||| ||||||||| ||| |||||| | ||||   |||||||||||||||||    
T  40792486 ccacatcacaactttttgtttcatgtacaagttatctaaaatacaaaaatagctttttgtccatcaaaaat 40792416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 16320634 - 16320545
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatac 118  Q
    |||||||  ||||||| ||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||| |||| || ||||||    
T  16320634 gaggcaagggacaggataaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaggttgcctaaaatac 16320545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 42772905 - 42772832
Alignment:
Q  27 ttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgt 100  Q
    |||||||||  |||| |||||||||  | ||| |||| ||||||||||||||| ||||||||||| || |||||    
T  42772905 ttgaggcaagagacaagacaaaaactcatatttttgtccttcaccaaaccacaacacaactttttgtcccacgt 42772832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 14296654 - 14296606
Alignment:
Q  87 tttttctctcacgtacaagttgtcttaaataccacaataatattttgtc 135  Q
    ||||| || |||||||||||||||| |||||||| ||||| ||||||||    
T  14296654 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 14296606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 14314902 - 14314854
Alignment:
Q  87 tttttctctcacgtacaagttgtcttaaataccacaataatattttgtc 135  Q
    ||||| || |||||||||||||||| |||||||| ||||| ||||||||    
T  14314902 tttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 14314854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 41720830 - 41720766
Alignment:
Q  140 aaaaattattcaacatcataaaaatttgtcttatgttgttctactttgtgttttgctgttatgtc 204  Q
    ||||||||| ||| ||||| ||| |||||| | ||||||||||||||||||| || |||| ||||    
T  41720830 aaaaattatacaatatcattaaagtttgtcatgtgttgttctactttgtgttatgttgttctgtc 41720766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 4e-24; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 21221332 - 21221449
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| ||||  |    
T  21221332 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaataccaaaatagca 21221431  T
Q  129 ttttgtccatcaaaaatt 146  Q
    |||||||| |||||||||    
T  21221432 ttttgtccctcaaaaatt 21221449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 29585001 - 29584872
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | ||||||| |||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  29585001 acaggacaaactggaggcaagtgacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 29584902  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  29584901 taccaaaatagcattttgtccttcaaaaat 29584872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 1344666 - 1344795
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||| ||||  | ||| |||| | ||||||||||||| ||||||||||| ||||||||||||||||||| |||    
T  1344666 acaggacaaactggaggcaagggacaggacagaaactcatatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaa 1344765  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  1344766 taccaaaatagcattttgtccctcaaaaat 1344795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 20 - 145
Target Start/End: Complemental strand, 29646188 - 29646063
Alignment:
Q  20 gataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaatacc 119  Q
    |||||| | |||||||  || |||||||||||||| ||| |||| | ||||||||||||||||||||||||| || |||||||||||||| | |||||||    
T  29646188 gataaactggaggcaagggataggacaaaaacatatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtttaaaatacc 29646089  T
Q  120 acaataatattttgtccatcaaaaat 145  Q
    | ||||  |||||||||  |||||||    
T  29646088 aaaatagcattttgtcccccaaaaat 29646063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 40094616 - 40094500
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||||||||||||||| | |||||||||| |||||| |||||||| ||||  |    
T  40094616 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtttcacgtacaaattgtctaaaataccaaaatagca 40094517  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  40094516 ttttgtccctcaaaaat 40094500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 42636375 - 42636491
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||| ||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||| |    
T  42636375 gaggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataaca 42636474  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  42636475 ttttgtccctcaaaaat 42636491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 20609629 - 20609736
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |||||||||     
T  20609629 gacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 20609728  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  20609729 tcaaaaat 20609736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 28675916 - 28675787
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  || |||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  28675916 acaggacaaactggaggcaagggataggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 28675817  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  28675816 taccaaaatagcattttgtccctcaaaaat 28675787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 39052797 - 39052926
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| ||||   ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  39052797 acaggacaaactggaggcaatggacaggacaaaaactcatatttttgtctctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 39052896  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||| |||||||||  |||||||    
T  39052897 taccaaaataacattttgtcccccaaaaat 39052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 47958391 - 47958520
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||| ||| ||||||||||| || |||||||||||||||| |||    
T  47958391 acaggaaaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaactacagcacaactttttgtcccacgtacaagttgtctaaaa 47958490  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  47958491 taccaaaatagcattttgtccctcaaaaat 47958520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 49748870 - 49748999
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||| |||| |||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||| |||||    
T  49748870 acaggacaaactggaggcaaaggacatgacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgttttaaa 49748969  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||| |||| ||||  |||||||    
T  49748970 taccaaaataacatttcgtcccccaaaaat 49748999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 51259739 - 51259868
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||||||||||||  ||||||||||| || |||||||||||||||| |||    
T  51259739 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacggcacaactttttgtcccacgtacaagttgtctaaaa 51259838  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||| ||||||||| | ||||||    
T  51259839 taccaaaataacattttgtcccttaaaaat 51259868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 53557754 - 53557883
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | | | |||| | ||||||||||||  ||||||||||| ||||||||||||||||||| |||    
T  53557754 acaggacaaactggaggcaatggacaggacaaaaactcatagttttgtccctcaccaaaccactgcacaactttttgtctcacgtacaagttgtctaaaa 53557853  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  53557854 taccaaaatagcattttgtccttcaaaaat 53557883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 19906875 - 19906779
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||  ||||||||||||||  ||||| |||| | ||||||||||||| ||||||||||| ||||||||||||||||||| ||| |||| ||||    
T  19906875 gaggcaagggacaggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtctcacgtacaagttgtctaaaacaccaaaata 19906779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 51925180 - 51925296
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||| ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||| || ||||||| ||||| |    
T  51925180 gaggcaaaggacaggacaaaaactgatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtttttaataccaaaataaca 51925279  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||| ||||  |||||||    
T  51925280 tttcgtcccccaaaaat 51925296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 136
Target Start/End: Original strand, 3864647 - 3864754
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||| ||||||||||||||  | ||| |||| | || |||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |    
T  3864647 gaggcaaaggacaggacaaaaactcatatttttgtccctcgccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagca 3864746  T
Q  129 ttttgtcc 136  Q
    ||||||||    
T  3864747 ttttgtcc 3864754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 25860380 - 25860483
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||| | ||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  25860380 acaggacaaactggaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtctcacgtacaagttgtctaaaa 25860479  T
Q  116 tacc 119  Q
    ||||    
T  25860480 tacc 25860483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 50678924 - 50678809
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | ||||||||  |||||||||||||  | ||| ||||   ||||||||||||| ||||||||||| ||||||||||||||||||| |||    
T  50678924 acaggacaaactggaggcaaagaacaggacaaaaactgatatttttgtctctcaccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaa 50678825  T
Q  116 taccacaataatattt 131  Q
    ||||| |||| |||||    
T  50678824 taccaaaatagtattt 50678809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 12349130 - 12349259
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| ||||   ||||||||||||| ||||||||| | || |||||||||||||||| |||    
T  12349130 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtctctcaccaaaccacagcacaactttatgtcccacgtacaagttgtctaaaa 12349229  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| ||||||||    
T  12349230 taccaaaatagcattttgtccctcaaaaat 12349259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 21374056 - 21373947
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| |||||||||  |||||||||||| |  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  21374056 acaggacaaacttgaggcaagggacaggacaaaatctcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaa 21373957  T
Q  116 taccacaata 125  Q
    ||||| ||||    
T  21373956 taccaaaata 21373947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 25927286 - 25927415
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | | |||||| |||| ||||||||||| || |||||||||||||||| |||    
T  25927286 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtcccttaccaaaacacaacacaactttttgtcccacgtacaagttgtctaaaa 25927385  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||| ||||||| | ||||||||    
T  25927386 taccaaaataacattttgttcctcaaaaat 25927415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 33364737 - 33364866
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||  | ||| ||||||||||||||||||||| ||||||||||||||||||| |||    
T  33364737 acaggacaaactggaggcaagagacaggacaaaaactgatatttttgcccctcagcaaaccacatcacaactttttgtctcacgtacaagttgtctaaaa 33364836  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  |||||||||  |||||||    
T  33364837 tatcaaaatagcattttgtcccccaaaaat 33364866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 34026780 - 34026664
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||| |||||||||  | ||| |||| | ||||||||||||| ||||| ||||| || |||||||||||||||| |||||||| ||||  |    
T  34026780 gaggcaagggacatgacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcccacgtacaagttgtctaaaataccaaaatagca 34026681  T
Q  129 ttttgtccatcaaaaat 145  Q
    |||||||| ||||||||    
T  34026680 ttttgtccctcaaaaat 34026664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 3695302 - 3695381
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaatt 146  Q
    |||||||||||||||||||| |||| || |||||||||||||||| |||||||| |||| |||||| |||  ||||||||    
T  3695302 tcaccaaaccacatcacaaccttttgtcccacgtacaagttgtctaaaataccaaaatagtattttatcccccaaaaatt 3695381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 38 - 137
Target Start/End: Original strand, 34351349 - 34351448
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    |||| |||||||||| |||||||||| | ||| ||||||||| ||||||||||| || ||| |||||||||||| ||||| || ||||| ||||| ||||    
T  34351349 gacacgacaaaaacaaaaattattgtccctcatcaaaccacaacacaactttttgtcgcacatacaagttgtctaaaatatcaaaataacattttatcca 34351448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 4851466 - 4851544
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||| ||||| ||||||||||| || |||||||||||||||| |||||||| ||||  ||||||||| ||||||||    
T  4851466 tcaccaacccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccctcaaaaat 4851544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 20255147 - 20255042
Alignment:
Q  39 acaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccat 138  Q
    |||||||||||||  | ||| |||| | ||||||||||||| |||||||| || || ||| |||||||||||| |||||||| ||||| ||||||||| |    
T  20255147 acaggacaaaaactcatatttttgtccctcaccaaaccacagcacaacttcttgtcccac-tacaagttgtctaaaataccaaaataacattttgtccct 20255049  T
Q  139 caaaaat 145  Q
    |||||||    
T  20255048 caaaaat 20255042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 44117065 - 44116936
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||||||||||||  | ||| |||| | ||| ||||||||  ||||||||||| || |||||||||||||||| |||    
T  44117065 acaggacaaactggaggcaagggacaggacaaaaactcatatttttgtccctcatcaaaccactgcacaactttttgtcccacgtacaagttgtctaaaa 44116966  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||| | ||||  ||||||||| ||||||||    
T  44116965 tacaaaaatagcattttgtccctcaaaaat 44116936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 142
Target Start/End: Original strand, 8648538 - 8648642
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    |||| |||||||||  ||||| |||||| | || |||| ||||||||||||||| || || |||||| |||||| |||||||| |||||| |||||||||    
T  8648538 gacatgacaaaaactgaaattcttgttcctaactaaactacatcacaactttttgtcacaagtacaaattgtctaaaataccaaaataatcttttgtcca 8648637  T
Q  138 tcaaa 142  Q
     ||||    
T  8648638 ccaaa 8648642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 24571394 - 24571278
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || || ||||||||||||| |||||| | ||||  |    
T  24571394 gaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaatacaaaaatagga 24571295  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  24571294 ttttgtcccccaaaaat 24571278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 38213467 - 38213351
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  ||||||||||||||  | ||| ||||   |||| |||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |    
T  38213467 gaggcaagagacaggacaaaaactcatatttttgtcactcacgaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatacca 38213368  T
Q  129 ttttgtccatcaaaaat 145  Q
    ||||||||  |||||||    
T  38213367 ttttgtcccccaaaaat 38213351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 125
Target Start/End: Complemental strand, 3964388 - 3964305
Alignment:
Q  42 ggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||  ||||| |||| | ||||||||||||| ||||||||||| || || ||||||||||||| |||||||| ||||    
T  3964388 ggacaaaaactgaaatttttgtccctcaccaaaccacagcacaactttttgtcccatgtacaagttgtctaaaataccaaaata 3964305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 145
Target Start/End: Original strand, 26282372 - 26282475
Alignment:
Q  42 ggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaa 141  Q
    |||||||||| || ||| ||||   ||| ||||||||| ||||||||||| || |||||| ||||||||| |||||||| ||||  ||||||||| ||||    
T  26282372 ggacaaaaacttatatttttgtctctcatcaaaccacagcacaactttttgtcccacgtataagttgtctaaaataccaaaatagcattttgtccctcaa 26282471  T
Q  142 aaat 145  Q
    ||||    
T  26282472 aaat 26282475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 145
Target Start/End: Complemental strand, 44000373 - 44000258
Alignment:
Q  30 aggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatat 129  Q
    ||||||| |||| |||||||||| || || || | | |||| |||||||||||||| ||||| || |||||||||||| ||| |||||| | |||| | |    
T  44000373 aggcaaaggacatgacaaaaacagaattttttttccctcactaaaccacatcacaattttttgtcccacgtacaagttatctgaaatacaaaaatagttt 44000274  T
Q  130 tttgtccatcaaaaat 145  Q
    |||||||| |||||||    
T  44000273 tttgtccaccaaaaat 44000258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 2135196 - 2135067
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  ||||| ||||||||  | ||| |||| | ||||||||||||| ||||||||||| || ||||||||| || ||| |||    
T  2135196 acaggacaaactagaggcaagggacagaacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaaattatctaaaa 2135097  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  | ||||||| ||||||||    
T  2135096 taccaaaatagcactttgtccctcaaaaat 2135067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 31882981 - 31883110
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||  |||| |||||||||  | ||| |||| | ||| ||||||||| ||||||||||| || |||||||||||||||| |||    
T  31882981 acaggacaaactggaggcaagagacacgacaaaaactgatatttttgtgcctcagcaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 31883080  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    || || ||||  |||||||||  |||||||    
T  31883081 tatcaaaatagcattttgtcccccaaaaat 31883110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 51296707 - 51296587
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| | |||||||| ||||||||||||||  | ||| |||| | ||||||||||||| ||||| ||||| ||  | ||||||||||||| |||    
T  51296707 acaggacaaactggaggcaaaggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaattttttgtcctaagtacaagttgtctaaaa 51296608  T
Q  116 taccacaataatattttgtcc 136  Q
    ||| | ||||  |||||||||    
T  51296607 tacaaaaatagcattttgtcc 51296587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 32621912 - 32621865
Alignment:
Q  99 gtacaagttgtcttaaataccacaataatattttgtccatcaaaaatt 146  Q
    ||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  32621912 gtacaagttgtctaaaataccaaaataatatgttgtccatcaaaaatt 32621865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 54622777 - 54622864
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||||||  | ||| ||||   |||| |||||||| ||||||||||| || |||||||||||||||| |||||||| ||||    
T  54622777 gacaggacaaaaactcatatttttgtcgctcacgaaaccacaacacaactttttatcccacgtacaagttgtctaaaataccaaaata 54622864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 14155484 - 14155573
Alignment:
Q  81 cacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtc--catcaaaaattattcaacatcataaaaatttgt 168  Q
    ||||||||||| ||||| ||||||||||||| ||||| || |||||| |||||||  ||  ||||||||||||| | ||||||| |||||    
T  14155484 cacaactttttgtctcaagtacaagttgtctaaaatatcaaaataatcttttgtccacaaaaaaaattattcaataccataaaagtttgt 14155573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 23322216 - 23322151
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatatttt 132  Q
    |||| |||||||| ||||||||||| |||| |||||||||||||| | ||| || |||||||||||    
T  23322216 tcactaaaccacaacacaactttttatctctcgtacaagttgtctaatatatcaaaataatatttt 23322151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 24721598 - 24721502
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||| ||| ||||||||||||||  ||||| | || | ||| ||||||||| ||||||||||| || ||| |||||||||||| ||| |||| ||||    
T  24721598 gaggtaaaggacaggacaaaaactaaaattttggtacctcaacaaaccacaacacaactttttatcccacatacaagttgtctaaaacaccaaaata 24721502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 145
Target Start/End: Original strand, 3867646 - 3867737
Alignment:
Q  54 aaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||| |||| | ||||||||||||| ||||||||||| ||  ||||||||||| ||| ||| |||| ||||  |||||||||  |||||||    
T  3867646 aaatttttgtccctcaccaaaccacagcacaactttttgtcctacgtacaagttttctaaaacaccaaaatagcattttgtcccccaaaaat 3867737  T

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Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 145
Target Start/End: Complemental strand, 5442366 - 5442288
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||||||| |||| ||||||||||| || |||||||||| ||||| ||||| || ||||  ||||| ||| ||||||||    
T  5442366 tcaccaaatcacagcacaactttttgtcccacgtacaagctgtctaaaatatcaaaatagcattttatccctcaaaaat 5442288  T

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Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 135
Target Start/End: Original strand, 39215485 - 39215547
Alignment:
Q  73 aaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtc 135  Q
    ||||| |||| || ||||| || |||||||||||||||| |||||||| ||||| ||||||||    
T  39215485 aaccaaatcataattttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtc 39215547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 42547462 - 42547511
Alignment:
Q  139 caaaaattattcaacatcataaaaatttgtcttatgttgttctactttgt 188  Q
    |||||||||||||| ||||||||| |||||| | ||||||||||| ||||    
T  42547462 caaaaattattcaatatcataaaagtttgtcatgtgttgttctaccttgt 42547511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 23 - 145
Target Start/End: Original strand, 18032 - 18154
Alignment:
Q  23 aaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccaca 122  Q
    ||||| |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| |    
T  18032 aaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaa 18131  T
Q  123 ataatattttgtccatcaaaaat 145  Q
    |||  ||||||||| ||||||||    
T  18132 atagcattttgtccctcaaaaat 18154  T

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Target: scaffold0169; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 12529 - 12636
Alignment:
Q  38 gacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtcca 137  Q
    ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||||||| ||||  |||||||||     
T  12529 gacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaataccaaaatagcattttgtccc 12628  T
Q  138 tcaaaaat 145  Q
    ||||||||    
T  12629 tcaaaaat 12636  T

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Target: scaffold0208 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 136
Target Start/End: Original strand, 2309 - 2429
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||||| |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  2309 acaggacaaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 2408  T
Q  116 taccacaataatattttgtcc 136  Q
    ||||| |||| | ||||||||    
T  2409 taccaaaatagttttttgtcc 2429  T

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Target: scaffold0054 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 23700 - 23590
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| ||| |||||||||  |||| |||||||||  | ||| |||| ||||||||||||||| ||||||||||| || |||||||||||||||| |||    
T  23700 acaggacaaacttgaggcaagggacatgacaaaaactcatatttttgtccttcaccaaaccacagcacaactttttgtcccacgtacaagttgtctaaaa 23601  T
Q  116 taccacaataa 126  Q
    ||||| |||||    
T  23600 taccaaaataa 23590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 19966 - 19903
Alignment:
Q  82 acaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||||||||| | ||||||||||||||| | |||||||| |||| | |||||| ||||||||||    
T  19966 acaactttttgtttcacgtacaagttgtttgaaataccaaaatagtcttttgttcatcaaaaat 19903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 102074 - 101945
Alignment:
Q  16 acaggataaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaa 115  Q
    |||||| || || |||||||  |||| |||||||||  | ||| |||| | ||||||||||||||||||||||||| || |||||||||||||||| |||    
T  102074 acaggacaacttggaggcaacggacatgacaaaaactcatatttttgtccctcaccaaaccacatcacaactttttgtcccacgtacaagttgtctaaaa 101975  T
Q  116 taccacaataatattttgtccatcaaaaat 145  Q
    ||||| ||||  ||||||||| | ||||||    
T  101974 taccaaaatagcattttgtccctaaaaaat 101945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 19112 - 19190
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||||||| |||| ||||||||||| || |||||||||||||||| |||||||| ||||| ||||||||| ||||||||    
T  19112 tcaccaaatcacagcacaactttttgtcccacgtacaagttgtctaaaataccaaaataacattttgtccttcaaaaat 19190  T

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Target: scaffold0027 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 15245 - 15168
Alignment:
Q  68 caccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| |||||| | |||| ||||||||||  |||||||    
T  15245 caccaaaccacaacacaactttttgtctcacgtacaagttgtctaaaatactaaaatagtattttgtcccccaaaaat 15168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 1627 - 1741
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataata 128  Q
    |||||||  |||| |||||||||  ||||| |||| | ||||||||||||| ||||||||||| || |||||||||||||||| ||| |||| ||||  |    
T  1627 gaggcaagggacaagacaaaaactgaaatttttgtccctcaccaaaccacaacacaactttttgtcccacgtacaagttgtctaaaaaaccaaaatagca 1726  T
Q  129 ttttgtccatcaaaa 143  Q
    ||| |||| ||||||    
T  1727 tttcgtccctcaaaa 1741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 145
Target Start/End: Original strand, 372986 - 373064
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||| | ||||||||||| || |||||||||||||||| |||||||| ||||  ||||||||| ||||||||    
T  372986 tcaccaaaccataacacaactttttgtcccacgtacaagttgtctaaaataccaaaatatcattttgtccctcaaaaat 373064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 145
Target Start/End: Complemental strand, 51509 - 51435
Alignment:
Q  71 caaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||| ||||||||||| || |||||||||||||||| ||||| || ||||  ||||||||| ||||||||    
T  51509 caaaccacagcacaactttttgtcccacgtacaagttgtctaaaatatcaaaatagcattttgtccctcaaaaat 51435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 111
Target Start/End: Original strand, 4557 - 4645
Alignment:
Q  23 aaatttgaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtct 111  Q
    ||||| |||||||  ||||||||||||||  | ||| |||| | ||||||||||||| ||||||||||| || |||||| |||||||||    
T  4557 aaattggaggcaagggacaggacaaaaactcatatttttgtccctcaccaaaccacaacacaactttttgtcccacgtaaaagttgtct 4645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 13615 - 13679
Alignment:
Q  81 cacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||| || || |||||||||||||  ||||||| |||| |||||||||||||||||||    
T  13615 cacaactttttgtcacatgtacaagttgtctagaataccaaaatagtattttgtccatcaaaaat 13679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 125
Target Start/End: Original strand, 15403 - 15461
Alignment:
Q  67 tcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    ||||||||||||| ||||||||||| || || ||||||||||||| |||||||| ||||    
T  15403 tcaccaaaccacaacacaactttttgtcccatgtacaagttgtctaaaataccaaaata 15461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 5423 - 5526
Alignment:
Q  29 gaggcaaatgacaggacaaaaa-cataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataat 127  Q
    |||||||  ||||||||||||| || | ||| |||| | ||||||||||||||||||||||||| || ||| ||||||||| || |||||| | |||||     
T  5423 gaggcaagggacaggacaaaaaacacatatttttgtccctcaccaaaccacatcacaactttttgtcccacatacaagttgcctaaaatacaaaaataac 5522  T
Q  128 attt 131  Q
    ||||    
T  5523 attt 5526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 33553 - 33642
Alignment:
Q  54 aaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaa 143  Q
    ||||| |||| | ||| ||||||||| ||||||||||| || ||||||||| |||| | |||||||| ||||   |||||||||||||||    
T  33553 aaattcttgtccctcatcaaaccacaacacaactttttgtcccacgtacaaattgtataaaataccaaaataggcttttgtccatcaaaa 33642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 2520 - 2595
Alignment:
Q  69 accaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaataatattttgtccatcaaaaat 145  Q
    ||||||||||| ||||||| ||  ||||||||||||||||||| |||||||| ||||  |||||||||  |||||||    
T  2520 accaaaccacaacacaactattg-tctcacgtacaagttgtctaaaataccaaaatagcattttgtcccccaaaaat 2595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 13683 - 13767
Alignment:
Q  41 aggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||||||  ||||| |||| | |||||||||||||  |||||||||| || ||| |||||||||||| ||| |||| ||||    
T  13683 aggacaaaaactgaaatttttgtccctcaccaaaccacagtacaactttttgtcccacttacaagttgtctaaaacaccaaaata 13767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 42934 - 43029
Alignment:
Q  29 gaggcaaatgacaggacaaaaacataaattattgttcttcaccaaaccacatcacaactttttctctcacgtacaagttgtcttaaataccacaata 125  Q
    |||||||  ||||| ||||||||  |||||  ||| | ||||||||||||| ||||||||||| || ||||||||| |||||| ||| |||| ||||    
T  42934 gaggcaagggacagaacaaaaactgaaatttgtgtccctcaccaaaccacaacacaactttttgtcccacgtacaa-ttgtctaaaacaccaaaata 43029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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