View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10630_high_5 (Length: 229)
Name: NF10630_high_5
Description: NF10630
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10630_high_5 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 34879794 - 34879581
Alignment:
| Q |
16 |
aagattgtaatagtactagttcccattggccttattcttgatggattcaaatctaggacccttatcaccaaacttagtttttccataaagctccaaatag |
115 |
Q |
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| T |
34879794 |
aagattgtaatagtactagttcccattggccttattcttgatggattcaaatctaggacccttatcaccaaacttagtttttccataaagctccaaatag |
34879695 |
T |
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| Q |
116 |
tcaccatagcagtaattacttggatacaagagtttaggagctggagaaataatagcttcaccaactggattatagaaacttgcaatagatagtctacttc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34879694 |
tcaccatagcagtaattacttggatacaagagtttaggagctggagaaataatagcttcaccaactggattatagaaacttgcaatagatagtctacttc |
34879595 |
T |
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| Q |
216 |
cattcttgtcaggc |
229 |
Q |
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|||||||||||||| |
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| T |
34879594 |
cattcttgtcaggc |
34879581 |
T |
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