View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10631_high_7 (Length: 250)
Name: NF10631_high_7
Description: NF10631
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10631_high_7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 250
Target Start/End: Complemental strand, 8472654 - 8472410
Alignment:
| Q |
8 |
aagcaaaggattactgcaaaatatagttggcggcatgtgatataaatcatatcatatgatatttaatgattggctaccttgaatgtcacgcttccttaat |
107 |
Q |
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| T |
8472654 |
aagcaaaggattactgcaaaatatagttggcggcatgtgatataaatcatatcatatgatatttaatgattggctaccttgaatgtcacgcttccttaat |
8472555 |
T |
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| Q |
108 |
ttgataccgtggtgac-attccacacgcaaagttgtcaacgcctcactaagcttatgcactttccacacaataaag-nnnnnnntatacaccttcaaatt |
205 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
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| T |
8472554 |
ttgataccgtggtgacaattccacacgcaaagttgtcaacgcctcactaagcttatgcactttccacacaataaagaaaaaaaatatacatcttcaaatt |
8472455 |
T |
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| Q |
206 |
taactttactatagtactaactgtccaatccaacaaattaaattc |
250 |
Q |
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| T |
8472454 |
taactttactatagtactaactgtccaatccaacaaatttaattc |
8472410 |
T |
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