View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10632_6 (Length: 402)
Name: NF10632_6
Description: NF10632
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10632_6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 10 - 402
Target Start/End: Complemental strand, 36534984 - 36534588
Alignment:
| Q |
10 |
aagaatatggcaaacaaaacaaccatatacaat---atatgtatacttgtgaatgcatgaaataaaacctgaataattaggctaaaagccaaaagtttct |
106 |
Q |
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| T |
36534984 |
aagaaaatggcaaacaaaacaaccatatacaattccatatgtatacttgtgaatgcatgaaataaaacctgaataattaggctaaaagccaaaagtttct |
36534885 |
T |
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| Q |
107 |
atgagttttagtattgagaacatatcctccattttgtgcttttctttgaactgcaacacaggtgcatgtgcccggagtgttttggatcaaaaactccgcc |
206 |
Q |
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| T |
36534884 |
atgagttttagtattgagaacatatcctccattttgtgcttttctttgaactgcaacacaggtgcatgtgcccggagtgttttggatcaaaaactccgcc |
36534785 |
T |
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| Q |
207 |
gtgtcaaacatttttacccctttcaatgatcctcctgtaggtcgtttatatctgcacattcaaatttaaaatttaaaatagaaacaaaaatgtgcatgca |
306 |
Q |
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| T |
36534784 |
gtgtcaaacatttttacccctttcaatgatcctcctgtaggtcgtttatatctgcacattcaaatttaaaattttaaatagaaacaaaaatgtgcatgca |
36534685 |
T |
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| Q |
307 |
tatggttcaa-ttgaccaaataaacatacttttttgtttatataaaattaaagggattatatgatttattatatacttaccctaataatgtggaaga |
402 |
Q |
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| T |
36534684 |
tatggttcaatttgaccaaataaacatacttttttgtttatataaaattaaagggattatatgatttattctatacttaccctaataatgtggaaga |
36534588 |
T |
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