View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10633_low_7 (Length: 207)
Name: NF10633_low_7
Description: NF10633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10633_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 9546121 - 9546293
Alignment:
| Q |
16 |
agaagggctccctttcctattattacttacaatatgtgtaaccaaagatgatttcaagttaatattaacaagatcccacatagttaatacaatgaatgcc |
115 |
Q |
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| T |
9546121 |
agaagggctccctttcctattagtacttacaatatgtgtaaccaaagatgatttcaagttaatattaacaagatcccacatagttaatac----aatgcc |
9546216 |
T |
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| Q |
116 |
ctataatgttcctttcattctcattaatcgtttcttcaaatcattttcttgtgtcggtgtaaattgagtcaattact |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |||||||||||| |
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| T |
9546217 |
ctataatgttcctttcattctcattaatcgtttcttcaaatccttttcgtgtgtcagtgtaaatcgagtcaattact |
9546293 |
T |
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