View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10634_low_1 (Length: 392)
Name: NF10634_low_1
Description: NF10634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10634_low_1 |
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Alignment Details
Target: chr5 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 18 - 382
Target Start/End: Complemental strand, 6918200 - 6917835
Alignment:
| Q |
18 |
caaccttcctttcatgttatgtaaaacaaacaaaaccttaatttctcttcttttcctttatcctctttattccatccagctccaaagctacaataaatat |
117 |
Q |
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| T |
6918200 |
caaccttcctttcatgttatgtaaaacaaacaaaaccttaatttctcttcttttcctttatcctctttattccatccagctccaaagctacaataaatat |
6918101 |
T |
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| Q |
118 |
aatttatcatttcttttatgtaactttgcatgagaggaagtaaggaataa-taactaatcaacattattagcaatgacagggtcatcaagaaaaggacat |
216 |
Q |
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| T |
6918100 |
aatttatcatttcttttatgtaactttgcatgagaggaagtaaggaataaataactaatcaacattattagcaatgacagggtcatcaagaaaaggacat |
6918001 |
T |
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| Q |
217 |
acattcttggatgaaggaagcgttcatggtagaagatttggtaaattgaaaaaagacgaatttgacggttacaactccgacaaccatcctcgaaaaaaca |
316 |
Q |
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| T |
6918000 |
acattcttggatgaaggaagcgttcatggtagaagatttggcaaattgaaaaaagacgaatttgacggttacaactccgacaaccatcctcgaaaaaaca |
6917901 |
T |
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| Q |
317 |
gccctatcaaaacaactgatgcaccccatttagatcctcaaatggcatcagataattcaccctatg |
382 |
Q |
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| T |
6917900 |
gccctatcaaaacaactgatgcaccccatttagatcctcaaatggcatcagataattcaccttatg |
6917835 |
T |
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