View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10637_low_19 (Length: 239)
Name: NF10637_low_19
Description: NF10637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10637_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 51310720 - 51310498
Alignment:
| Q |
1 |
caatttcacctctttagaatcccacaccatcacctcatcgaaaagcacattacacgaaagcaactccttaaccaccatagcttcccctccttccaaacac |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51310720 |
caatttcacctctttagaatcccacaccatcacctcatcgaaaagcacattacacgaaagcaactccttaaccaccatagcttcccctccttccaaacac |
51310621 |
T |
|
| Q |
101 |
gaattcaacaactcttcaatcgaaaatgccaaatcattcaaatccacaaccttcctcataaccgttggacaagaatttgaaacagaattataagttctaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
51310620 |
gaattcaacaactcttcaatcgaaaatgccaaatcattcaaatccacaaccttcctcataaccgttggacaagaatttgaaaccgaattataagttctaa |
51310521 |
T |
|
| Q |
201 |
cagaaaacggaacaccagaattc |
223 |
Q |
| |
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||||||| ||||||||||||||| |
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| T |
51310520 |
cagaaaaaggaacaccagaattc |
51310498 |
T |
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