View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10637_low_21 (Length: 231)
Name: NF10637_low_21
Description: NF10637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10637_low_21 |
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Alignment Details
Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 175916 - 175719
Alignment:
| Q |
19 |
aatggtgtatgcaatttgtagacttttctcgaaatccaaagagggcaatatattgaatttggtggtacaagggttccatagtagcggatcaccacagtcg |
118 |
Q |
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| T |
175916 |
aatggtgtatgcaatttgtagacttttctcgaaatccaaagagggcaatatattgaatttggtggtacaagggttccatagtagcggatcaccacagtcg |
175817 |
T |
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| Q |
119 |
aatctgtcatcgatgg-ttgaagacagatgatgccatcgcaagagtcagctatgatagcacgaatgttagaaggatttagaggaaagttgagcttcat |
215 |
Q |
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| T |
175816 |
aatctgtcatcgatggtttgaagacagatgatgccatcgcaagagtcagctatgatagcacgaatgttagaaggatttagaggaaagttgagcttcat |
175719 |
T |
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