View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10637_low_9 (Length: 322)
Name: NF10637_low_9
Description: NF10637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10637_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 38 - 318
Target Start/End: Complemental strand, 35334558 - 35334278
Alignment:
| Q |
38 |
atcatcaattttcagtttattatttcttgtggaatcaatttcgcactttcgaggaatataattggttaactgtgaactcgtttatttcgtactgtcgtac |
137 |
Q |
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| T |
35334558 |
atcatcaatttttagtttattatttcttgtggaatcaatttcgcactttcgaggaatataattggttaactgtgaactcgtttatttcgtactgtcgtac |
35334459 |
T |
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| Q |
138 |
ttgtgcagttgatgaagatttacatttgactcttgcacatcaaatgtacaagagtggaagttataagaaagctttggaacacagcaacactgtctatgag |
237 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
35334458 |
ttgtgcagttgatgaagatttacatttgactcttgcacatcaaatgtacaagagtggaagttataagaaagcgttggaacacagcaacactgtctatgag |
35334359 |
T |
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| Q |
238 |
agaaatccgcttcgcaccgataacttactacttcttggtgcaatttattaccaggtttgttatttttctacctttgcttct |
318 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||| |
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| T |
35334358 |
agaaatccgcttcgcaccgataacttactactccttggtgcaatttattaccaggtttgttatttttctacttttgtttct |
35334278 |
T |
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