View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10638_low_11 (Length: 316)
Name: NF10638_low_11
Description: NF10638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10638_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 7 - 305
Target Start/End: Original strand, 37147868 - 37148182
Alignment:
| Q |
7 |
gttacatgttcaggtctgggtttctacaccatttttgttgctaatgaaatttgatttcaaagtcct-tataattttatttacaatttaatttaattgttt |
105 |
Q |
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| T |
37147868 |
gttacatgttcaggtctgggtttctacaccatttttgttgctaatgaaatttgatttcaaagtcctaaataattttatttacaatttaatttaattgttt |
37147967 |
T |
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| Q |
106 |
ctgaagtattttaggatattatgtt--------------agattttagtttctagttctagtctttccttcaattctcttgattctcatgcgtgctactg |
191 |
Q |
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| T |
37147968 |
ctgaagtattttaggatattatgttagatttgggtggaaagattttagtttctagttctagtctttccttcaattctcctgattctcatgcgtgcttctg |
37148067 |
T |
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| Q |
192 |
gaatggaattgtgaagaagataatggactgagaaagtttcgacggaacc-gatgagttgaagnnnnnnnnngccaaaaactctaacaagtttaattataa |
290 |
Q |
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| T |
37148068 |
gaatgaaattgtgctgaagataatgggctgagaaagtttcgacggaaccggcggagttgaagaaaaaaaaagccaaaaactctaacaagtttaattataa |
37148167 |
T |
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| Q |
291 |
acaaggccaaatacc |
305 |
Q |
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| T |
37148168 |
agaaggccaaatacc |
37148182 |
T |
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