View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10638_low_27 (Length: 242)
Name: NF10638_low_27
Description: NF10638
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10638_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 46017092 - 46017302
Alignment:
| Q |
1 |
tccgtcagggttgaagggaacggcgcctaggtcgaatgttgcagctgaaggcatttttggtgaatgagagaatgtggaagaactgaaagataagtgtgga |
100 |
Q |
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| T |
46017092 |
tccgtcagggttgaagggaacggcgcctaggtcgaatgttgcagctgaaggcatttttggtgaatgagagaatgtggaagaactgaaagataagtgtgga |
46017191 |
T |
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| Q |
101 |
acaaatgggcctgtttactgggccaatataaacttttttaacccaattaactgttttactatctacacatcctttttaacacnnnnnnnagattaggaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |
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| T |
46017192 |
acaaatgggcctgtttactgggccaatataaacttttttaacccaattaactgttttactatctacacctcctttttaacactatttttagattaggaaa |
46017291 |
T |
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| Q |
201 |
caatagaatga |
211 |
Q |
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||||||||||| |
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| T |
46017292 |
caatagaatga |
46017302 |
T |
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