View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1063_low_19 (Length: 429)
Name: NF1063_low_19
Description: NF1063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1063_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 350; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 30 - 419
Target Start/End: Complemental strand, 28030785 - 28030396
Alignment:
| Q |
30 |
aaaatatcccctacttgcactttcaactcccaaaattacaaggtggactagctgcttaatgctctcaaggaactggacctcataatatatgattgattgg |
129 |
Q |
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| T |
28030785 |
aaaatatcccctacttacactttcaactcccaaaattacaaggtggactagctgcttaatgctctcaaggaactggacctcataatatatgattgattag |
28030686 |
T |
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| Q |
130 |
ttgaataatttagtttgttgaataatcactcataatatatggttgcccaaagttactgtatctgttttacgatttctctagattaccatatatgcataat |
229 |
Q |
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| T |
28030685 |
ttgcataatttagtttgttgaataatcactcataatatatggttgcccaaagttactgtatctgttttacgatttctctagactacctaccatgcataat |
28030586 |
T |
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| Q |
230 |
aaatggttgcttagttgaataatttagttagttttgctaataattggcacttgccatcataaaaaataaattaataattgtcagttggataattttactt |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |
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| T |
28030585 |
aaatggttgcttagttgaataatttagttagttttgctaataattggcacttgccatcataaaaaataaattaataattggcacttggataattttactt |
28030486 |
T |
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| Q |
330 |
ctttctatgggagaagcttaaccggatattcattttatttatcacaagtttgtgagactcaaatttcttttgttatttttcaaagaataa |
419 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28030485 |
ctttctatgggagaagcttaaccggatattcattttatttatcacaagtttgtgagactcaaatttcttttgttatttttcaaagaataa |
28030396 |
T |
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