View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1063_low_28 (Length: 358)
Name: NF1063_low_28
Description: NF1063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1063_low_28 |
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Alignment Details
Target: chr4 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 97 - 267
Target Start/End: Complemental strand, 33174941 - 33174771
Alignment:
| Q |
97 |
caagtaggcgttgcaattgttcatcgtcctccaatcacattcatgtcattccaatgcaaattggaagaagtaggaagacgactactcgatcttgttccac |
196 |
Q |
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| T |
33174941 |
caagtaggcgttgcaattgttcatcgtcctacaatcacattcatgtcattccaatgcaaattggaagaagtaggaagacgactactcgatcttgttccac |
33174842 |
T |
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| Q |
197 |
aactaaaagagttgttagccgccaatgattgagagctcgaattgggagccctagttctccaaatttaggga |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33174841 |
aactaaaagagttgttagccgccaatgattgagagctcgaattgggagccctagttctccaaatttaggga |
33174771 |
T |
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